CuGenDBv2

Gene ID	CSPI03G02260
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	light-harvesting complex-like protein 3 isotype 1, chloroplastic
Genome location	Chr3:1701115..1703402
RNA-Seq Expression	CSPI03G02260
Synteny	CSPI03G02260
Gene Ontology terms	GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0041046.1 uncharacterized protein E6C27_scaffold477G00170 [Cucumis melo var. makuwa]

7.8e-135

95.54

Show/hide

Query:  MSSMALFSPSSHLSTLSP-SHHTTHFSFRPFSSLRTRNP-SSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKVAPEEQESLAGTNGSVAA
        MSSMALFSPSSHLSTLSP SHHTTHFSFRPFSSLRTRNP SSSSSSLFTIRATADNGAGISGGSATV+VETPVEQKDPEPA      +ESLAGTNGSVAA
Subjt:  MSSMALFSPSSHLSTLSP-SHHTTHFSFRPFSSLRTRNP-SSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKVAPEEQESLAGTNGSVAA

Query:  AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
        AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
Subjt:  AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV

Query:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET-SGSGKM
        DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET SGSGK+
Subjt:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET-SGSGKM

XP_004147237.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucumis sativus]

1.9e-144

99.25

Show/hide

Query:  MSSMALFSPSSHLSTLSPSHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKVAPEEQESLAGTNGSVAAAE
        MSSMALFSPSSHLST SPSHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAK+APEEQESLAGTNGSVAAAE
Subjt:  MSSMALFSPSSHLSTLSPSHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKVAPEEQESLAGTNGSVAAAE

Query:  EVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDS
        EVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDS
Subjt:  EVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDS

Query:  LTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM
        LTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM
Subjt:  LTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM

XP_008448777.1 PREDICTED: uncharacterized protein LOC103490842 [Cucumis melo]

2.7e-135

95.91

Show/hide

Query:  MSSMALFSPSSHLSTLSP-SHHTTHFSFRPFSSLRTRNP-SSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKVAPEEQESLAGTNGSVAA
        MSSMALFSPSSHLSTLSP SHHTTHFSFRPFSSLRTRNP SSSSSSLFTIRATADNGAGISGGSATV+VETPVEQKDPEPA      +ESLAGTNGSVAA
Subjt:  MSSMALFSPSSHLSTLSP-SHHTTHFSFRPFSSLRTRNP-SSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKVAPEEQESLAGTNGSVAA

Query:  AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
        AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
Subjt:  AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV

Query:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET-SGSGKM
        DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET SGSGKM
Subjt:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET-SGSGKM

XP_022965154.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucurbita maxima]

3.1e-115

85.02

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Query:  MSSMALFSPSSHLSTLSP-SHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKVAPEEQESLAGTNGSVAAA
        MSSMALFSP S LS+LSP SHH THF  RPFSSLR+RNPSS           ADNGAGISGGS  V+VE  V QKDPEP   A E++ESLA TNGSVAA 
Subjt:  MSSMALFSPSSHLSTLSP-SHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKVAPEEQESLAGTNGSVAAA

Query:  EEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD
        EEVV VVSKFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPV+FDTSIVPWWAWIKRYHLPEAE+LNGRAAMVGFFMAYFVD
Subjt:  EEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD

Query:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM
        SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET GSGK+
Subjt:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM

XP_038906355.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Benincasa hispida]

1.6e-135

95.51

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Query:  MSSMALFSPSSHLSTLSP-SHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKVAPEEQESLAGTNGSVAAA
        MSSMALFSPSSHLSTLSP SHH THFSFRPFSSLRTRNP  SSSSLFTIRATADNGAGISGGSA V+VETPVEQKDPEPAK   EEQESLAGTNGSVAAA
Subjt:  MSSMALFSPSSHLSTLSP-SHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKVAPEEQESLAGTNGSVAAA

Query:  EEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD
        EE VEVVSKFEDPKW+NGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD
Subjt:  EEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD

Query:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM
        SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDE SGSGKM
Subjt:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5D8 Uncharacterized protein

9.0e-145

99.25

Show/hide

Query:  MSSMALFSPSSHLSTLSPSHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKVAPEEQESLAGTNGSVAAAE
        MSSMALFSPSSHLST SPSHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAK+APEEQESLAGTNGSVAAAE
Subjt:  MSSMALFSPSSHLSTLSPSHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKVAPEEQESLAGTNGSVAAAE

Query:  EVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDS
        EVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDS
Subjt:  EVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDS

Query:  LTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM
        LTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM
Subjt:  LTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM

A0A1S3BLD8 uncharacterized protein LOC103490842

1.3e-135

95.91

Show/hide

Query:  MSSMALFSPSSHLSTLSP-SHHTTHFSFRPFSSLRTRNP-SSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKVAPEEQESLAGTNGSVAA
        MSSMALFSPSSHLSTLSP SHHTTHFSFRPFSSLRTRNP SSSSSSLFTIRATADNGAGISGGSATV+VETPVEQKDPEPA      +ESLAGTNGSVAA
Subjt:  MSSMALFSPSSHLSTLSP-SHHTTHFSFRPFSSLRTRNP-SSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKVAPEEQESLAGTNGSVAA

Query:  AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
        AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
Subjt:  AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV

Query:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET-SGSGKM
        DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET SGSGKM
Subjt:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET-SGSGKM

A0A5A7TG76 Uncharacterized protein

3.8e-135

95.54

Show/hide

Query:  MSSMALFSPSSHLSTLSP-SHHTTHFSFRPFSSLRTRNP-SSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKVAPEEQESLAGTNGSVAA
        MSSMALFSPSSHLSTLSP SHHTTHFSFRPFSSLRTRNP SSSSSSLFTIRATADNGAGISGGSATV+VETPVEQKDPEPA      +ESLAGTNGSVAA
Subjt:  MSSMALFSPSSHLSTLSP-SHHTTHFSFRPFSSLRTRNP-SSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKVAPEEQESLAGTNGSVAA

Query:  AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
        AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
Subjt:  AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV

Query:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET-SGSGKM
        DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET SGSGK+
Subjt:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET-SGSGKM

A0A6J1EC24 light-harvesting complex-like protein 3 isotype 1, chloroplastic

5.7e-115

84.27

Show/hide

Query:  MSSMALFSPSSHLSTLSP-SHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKVAPEEQESLAGTNGSVAAA
        MSSMALFSP S LS+LSP SHH THF  RPFSSLR+RNPSS           ADNGAGISGGS  V+VE+ V QKDPEP     E+QE LA TNGSVAA 
Subjt:  MSSMALFSPSSHLSTLSP-SHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKVAPEEQESLAGTNGSVAAA

Query:  EEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD
        EEVV VVSKFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPV+FDTSIVPWWAWIKRYHLPEAE+LNGRAAMVGFFMAYFVD
Subjt:  EEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD

Query:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM
        SLTGVGLVGQMGNFFCKTLLF+AVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET GSGK+
Subjt:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM

A0A6J1HQ78 light-harvesting complex-like protein 3 isotype 1, chloroplastic

1.5e-115

85.02

Show/hide

Query:  MSSMALFSPSSHLSTLSP-SHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKVAPEEQESLAGTNGSVAAA
        MSSMALFSP S LS+LSP SHH THF  RPFSSLR+RNPSS           ADNGAGISGGS  V+VE  V QKDPEP   A E++ESLA TNGSVAA 
Subjt:  MSSMALFSPSSHLSTLSP-SHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKVAPEEQESLAGTNGSVAAA

Query:  EEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD
        EEVV VVSKFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPV+FDTSIVPWWAWIKRYHLPEAE+LNGRAAMVGFFMAYFVD
Subjt:  EEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD

Query:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM
        SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET GSGK+
Subjt:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM

SwissProt top hits

e value

%identity

Alignment

Q6NKS4 Light-harvesting complex-like protein 3 isotype 2, chloroplastic

1.0e-73

56.83

Show/hide

Query:  SMALFSPSSHLSTLSPSHHTTHFSFRPFSSLRTRNPSSSSSSLFTI-RATADNGAGISGGSATVSVETPVEQKDPEPAKVAPEE-------QESLAGTNG
        SMALFSP    S  +P+             + T   S+   SL ++ RA++DNG             +PV +  P+PA VA EE       + S A  NG
Subjt:  SMALFSPSSHLSTLSPSHHTTHFSFRPFSSLRTRNPSSSSSSLFTI-RATADNGAGISGGSATVSVETPVEQKDPEPAKVAPEE-------QESLAGTNG

Query:  SVA--AAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGF
        +V   A +   E V K+++ KWVNGTWDL QF+K+G TDWD+VI +EA+RRKWLE+NPE++SN++ VVFDTSI+PWWAW+KRYHLPEAELLNGRAAM+GF
Subjt:  SVA--AAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGF

Query:  FMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGS
        FMAYFVDSLTGVGLV QMGNFFCKTLLFVAV GVL IRKNED++ LK L DETT YDKQWQA W++  S +
Subjt:  FMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGS

Q9SYX1 Light-harvesting complex-like protein 3 isotype 1, chloroplastic

1.4e-78

59.63

Show/hide

Query:  MALFSPSSHLSTLSPSHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETP----VEQKDPEPAKVAPEEQESLAGTNGSVAAA
        MALFSP    S+L   +    FSF   SS R        S L   RA++D+G+  +  +A VSVE P    V  K+P  +  A +++E+    N +V   
Subjt:  MALFSPSSHLSTLSPSHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETP----VEQKDPEPAKVAPEEQESLAGTNGSVAAA

Query:  E-EVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
        E +  E V KF+D +W+NGTWDL QF+K+G TDWD+VI AEA+RRKWLE NPE++SN++PV+FDTSI+PWWAWIKRYHLPEAELLNGRAAM+GFFMAYFV
Subjt:  E-EVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV

Query:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQ---DETSGSGK
        DSLTGVGLV QMGNFFCKTLLFVAV GVL IRKNED++ LK L DETT YDKQWQA W+   DE+ GS K
Subjt:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQ---DETSGSGK

Arabidopsis top hits

e value

%identity

Alignment

AT4G17600.1 Chlorophyll A-B binding family protein

1.0e-79

59.63

Show/hide

Query:  MALFSPSSHLSTLSPSHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETP----VEQKDPEPAKVAPEEQESLAGTNGSVAAA
        MALFSP    S+L   +    FSF   SS R        S L   RA++D+G+  +  +A VSVE P    V  K+P  +  A +++E+    N +V   
Subjt:  MALFSPSSHLSTLSPSHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETP----VEQKDPEPAKVAPEEQESLAGTNGSVAAA

Query:  E-EVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
        E +  E V KF+D +W+NGTWDL QF+K+G TDWD+VI AEA+RRKWLE NPE++SN++PV+FDTSI+PWWAWIKRYHLPEAELLNGRAAM+GFFMAYFV
Subjt:  E-EVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV

Query:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQ---DETSGSGK
        DSLTGVGLV QMGNFFCKTLLFVAV GVL IRKNED++ LK L DETT YDKQWQA W+   DE+ GS K
Subjt:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQ---DETSGSGK

AT5G47110.1 Chlorophyll A-B binding family protein

7.4e-75

56.83

Show/hide

Query:  SMALFSPSSHLSTLSPSHHTTHFSFRPFSSLRTRNPSSSSSSLFTI-RATADNGAGISGGSATVSVETPVEQKDPEPAKVAPEE-------QESLAGTNG
        SMALFSP    S  +P+             + T   S+   SL ++ RA++DNG             +PV +  P+PA VA EE       + S A  NG
Subjt:  SMALFSPSSHLSTLSPSHHTTHFSFRPFSSLRTRNPSSSSSSLFTI-RATADNGAGISGGSATVSVETPVEQKDPEPAKVAPEE-------QESLAGTNG

Query:  SVA--AAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGF
        +V   A +   E V K+++ KWVNGTWDL QF+K+G TDWD+VI +EA+RRKWLE+NPE++SN++ VVFDTSI+PWWAW+KRYHLPEAELLNGRAAM+GF
Subjt:  SVA--AAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGF

Query:  FMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGS
        FMAYFVDSLTGVGLV QMGNFFCKTLLFVAV GVL IRKNED++ LK L DETT YDKQWQA W++  S +
Subjt:  FMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCGTCCATGGCTTTGTTTTCTCCTTCATCCCATCTTTCTACTCTCTCTCCTTCACACCACACAACCCATTTCTCCTTCAGACCCTTTTCTTCTCTCAGAACCAGAAA
CCCTTCTTCTTCTTCTTCCTCTCTCTTCACTATCAGGGCCACAGCTGACAATGGTGCCGGAATTTCAGGTGGTTCAGCCACTGTTTCTGTAGAAACCCCCGTCGAGCAGA
AGGATCCGGAGCCGGCCAAGGTTGCACCCGAAGAGCAGGAGAGCCTCGCCGGAACCAATGGGTCGGTGGCGGCTGCTGAAGAAGTTGTCGAGGTGGTTAGCAAATTTGAA
GACCCTAAATGGGTTAATGGGACTTGGGATTTGAATCAGTTCCAGAAAAATGGAAGCACTGATTGGGATGCTGTTATTGATGCTGAGGCTAGGAGGAGGAAGTGGTTGGA
AAACAATCCAGAATCATCAAGTAATGAGGACCCTGTGGTGTTTGACACATCCATAGTTCCTTGGTGGGCTTGGATCAAGCGCTACCATCTGCCAGAGGCTGAGCTACTCA
ATGGGCGTGCAGCCATGGTGGGGTTCTTCATGGCTTACTTCGTCGATAGCTTGACAGGGGTAGGACTAGTAGGTCAAATGGGCAACTTCTTCTGCAAAACATTGCTATTT
GTTGCTGTGGTGGGAGTTCTTTTGATAAGAAAGAATGAAGATATAGAGACTCTAAAGAAGTTGATTGATGAAACAACATTTTACGACAAGCAATGGCAAGCAACTTGGCA
GGATGAAACCTCAGGCTCAGGCAAAATGTAA

mRNA sequence

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AGTAAATGTAGAAATTGCAATAAAATGACAAGTAAATGTAGAAAGTGCAAAGCTTCCCCATCCATCATAATTACAAGGCTGAGGATAGAGCTTAGAGCAGAAGCTCTCTC
CCTCCCTTCTCCATAACAACAATGTCGTCCATGGCTTTGTTTTCTCCTTCATCCCATCTTTCTACTCTCTCTCCTTCACACCACACAACCCATTTCTCCTTCAGACCCTT
TTCTTCTCTCAGAACCAGAAACCCTTCTTCTTCTTCTTCCTCTCTCTTCACTATCAGGGCCACAGCTGACAATGGTGCCGGAATTTCAGGTGGTTCAGCCACTGTTTCTG
TAGAAACCCCCGTCGAGCAGAAGGATCCGGAGCCGGCCAAGGTTGCACCCGAAGAGCAGGAGAGCCTCGCCGGAACCAATGGGTCGGTGGCGGCTGCTGAAGAAGTTGTC
GAGGTGGTTAGCAAATTTGAAGACCCTAAATGGGTTAATGGGACTTGGGATTTGAATCAGTTCCAGAAAAATGGAAGCACTGATTGGGATGCTGTTATTGATGCTGAGGC
TAGGAGGAGGAAGTGGTTGGAAAACAATCCAGAATCATCAAGTAATGAGGACCCTGTGGTGTTTGACACATCCATAGTTCCTTGGTGGGCTTGGATCAAGCGCTACCATC
TGCCAGAGGCTGAGCTACTCAATGGGCGTGCAGCCATGGTGGGGTTCTTCATGGCTTACTTCGTCGATAGCTTGACAGGGGTAGGACTAGTAGGTCAAATGGGCAACTTC
TTCTGCAAAACATTGCTATTTGTTGCTGTGGTGGGAGTTCTTTTGATAAGAAAGAATGAAGATATAGAGACTCTAAAGAAGTTGATTGATGAAACAACATTTTACGACAA
GCAATGGCAAGCAACTTGGCAGGATGAAACCTCAGGCTCAGGCAAAATGTAATATCAGAAAAGTTGCCTGTTTCTCGTTTTGAATTGACTATGTTTGTATCTTTAAAGAT
TTGAGCTAAGTAGAGAAAAGATAATGTGAGCTCTGAAAGATGCTAAATCTTTAGGCCTCAGTTTAATGCTTCTTGAAGTTGACGCTTCTTGAGGGTTCCAATGAAGATCT
CTCCAAAACAGCCTTGGTTTATCTGGAAATATGGGTTTGAGGGTTAAGCTATTTTGATGGATTTATTATCAGGTTTAGCTCAATCAGTTTCCCAAAATTCCATTTTTGTT
GCGCAAGAAGTCATGTGGGGAAATTTTGGTTTGGTTTATAGGGGCCCTTTATTAACAGATGCATTTATACATACATATGCCTAAAGAGTCTTGAAGATGAGTCATCCACT
CAAGATTTGAGCATTTATTGAACTTATAAGGGGGAGTGATATACAAACAATTTTTTTTTGAGAAATCACTTTTGCTACTGG

Protein sequence

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MSSMALFSPSSHLSTLSPSHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGISGGSATVSVETPVEQKDPEPAKVAPEEQESLAGTNGSVAAAEEVVEVVSKFE
DPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLF
VAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM

CSPI03G02260 (gene) of Cucumber (PI 183967) v1 genome