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CSPI03G02600 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G02600
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1
Genome locationChr3:1998232..2000617
RNA-Seq ExpressionCSPI03G02600
SyntenyCSPI03G02600
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041077.1 protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa]1.4e-3977.52Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLA----------------------------RSPSELGCVQSLLPFHDAVAG
        MASACQRIASRISQSSFRTFVRTNSSAKSSSS FPLPSKSTAPSVRRFSLA                            RSPSELGCVQSLLPFHDAVAG
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLA----------------------------RSPSELGCVQSLLPFHDAVAG

Query:  ARMISCLSTNSRSCRALSQGILCCTSPGL
        ARMISCLSTNSRSCRALSQGILCCTSPGL
Subjt:  ARMISCLSTNSRSCRALSQGILCCTSPGL

XP_004147213.1 uncharacterized protein LOC101221008 isoform X1 [Cucumis sativus]4.9e-45100Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

XP_008448835.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucumis melo]4.1e-4499.01Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASACQRIASRISQSSFRTFVRTNSSAKSSSS FPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

XP_022154046.1 uncharacterized protein LOC111021400 isoform X1 [Momordica charantia]1.8e-3991.09Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASAC RIASRISQSSFR  VRT S  KS SSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQG LCCTSPG
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

XP_038903086.1 protein NONRESPONDING TO OXYLIPINS 2, mitochondrial isoform X1 [Benincasa hispida]6.0e-4395.05Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASACQRIASRISQSSFRTFVRTN+SAKSSSSPFPLP+KSTAPSVRRFSLARSPSELGC+QSLLPFH+AVAGARMISCLSTNSRSCRALSQGILCCT PG
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

TrEMBL top hitse value%identityAlignment
A0A0A0L1I6 Uncharacterized protein7.4e-39100Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ
        MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ

A0A1S3BKM3 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X12.0e-4499.01Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASACQRIASRISQSSFRTFVRTNSSAKSSSS FPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

A0A1S3BL94 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X26.3e-3898.9Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ
        MASACQRIASRISQSSFRTFVRTNSSAKSSSS FPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ

A0A5A7THI0 Protein NUCLEAR FUSION DEFECTIVE 66.7e-4077.52Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLA----------------------------RSPSELGCVQSLLPFHDAVAG
        MASACQRIASRISQSSFRTFVRTNSSAKSSSS FPLPSKSTAPSVRRFSLA                            RSPSELGCVQSLLPFHDAVAG
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLA----------------------------RSPSELGCVQSLLPFHDAVAG

Query:  ARMISCLSTNSRSCRALSQGILCCTSPGL
        ARMISCLSTNSRSCRALSQGILCCTSPGL
Subjt:  ARMISCLSTNSRSCRALSQGILCCTSPGL

A0A6J1DMJ3 uncharacterized protein LOC111021400 isoform X18.7e-4091.09Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASAC RIASRISQSSFR  VRT S  KS SSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQG LCCTSPG
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

SwissProt top hitse value%identityAlignment
Q6NNL9 Protein NONRESPONDING TO OXYLIPINS 2, mitochondrial1.6e-0639.6Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MAS C R  S+ + S+FR+ +   S    S+S F        PS      +R   +LG +QSLLP + AVA AR+ SCL  +S++ R+L+QG+LC  +PG
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        +
Subjt:  L

Arabidopsis top hitse value%identityAlignment
AT4G17310.1 unknown protein7.3e-2359.22Show/hide
Query:  MASACQRIASRISQSSFRTFVR--TNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTS
        MASAC+++ +R S SS ++ +R  T S++ +SS+ F LPS+ T    R FS +R PSELGCVQSLLP H  VA AR+ SCLST SRS RALSQG LCCTS
Subjt:  MASACQRIASRISQSSFRTFVR--TNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTS

Query:  PGL
        P L
Subjt:  PGL

AT4G17310.2 unknown protein9.3e-1856.99Show/hide
Query:  MASACQRIASRISQSSFRTFVR--TNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ
        MASAC+++ +R S SS ++ +R  T S++ +SS+ F LPS+ T    R FS +R PSELGCVQSLLP H  VA AR+ SCLST SRS RALSQ
Subjt:  MASACQRIASRISQSSFRTFVR--TNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ

AT5G47455.1 unknown protein1.0e-1653.12Show/hide
Query:  RIASRISQSSFRTFVRT----------NSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQG
        R  SR S SSF++ +R+          +S A +SS+ F +PSK  A  + RFS +R PSELGCVQSLLP H  VA AR+ SCLST SRS RAL+QG
Subjt:  RIASRISQSSFRTFVRT----------NSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQG

AT5G47455.6 unknown protein1.0e-1653.12Show/hide
Query:  RIASRISQSSFRTFVRT----------NSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQG
        R  SR S SSF++ +R+          +S A +SS+ F +PSK  A  + RFS +R PSELGCVQSLLP H  VA AR+ SCLST SRS RAL+QG
Subjt:  RIASRISQSSFRTFVRT----------NSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQG

AT5G47455.7 unknown protein1.0e-1653.12Show/hide
Query:  RIASRISQSSFRTFVRT----------NSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQG
        R  SR S SSF++ +R+          +S A +SS+ F +PSK  A  + RFS +R PSELGCVQSLLP H  VA AR+ SCLST SRS RAL+QG
Subjt:  RIASRISQSSFRTFVRT----------NSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCGCTTGCCAAAGAATTGCGAGCAGAATCTCTCAATCCTCATTCAGAACATTCGTCCGTACGAATTCTTCCGCCAAATCTTCATCTTCTCCGTTCCCTCTACC
TTCCAAATCCACTGCTCCCTCTGTTCGCCGATTCTCGCTCGCCAGGTCTCCGTCGGAGCTGGGATGTGTTCAATCCCTTTTGCCATTTCACGACGCGGTTGCTGGAGCGA
GAATGATTTCGTGTCTGAGTACAAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGGTATTCTCTGCTGCACCTCTCCCGGCCTCTAA
mRNA sequenceShow/hide mRNA sequence
AAAACCCTCAACCCTTCGGTTCAATCGTTTCTTGTAGAATTTCCAGATCTCCCGTTCTTCTTTCATGGCTTCCGCTTGCCAAAGAATTGCGAGCAGAATCTCTCAATCCT
CATTCAGAACATTCGTCCGTACGAATTCTTCCGCCAAATCTTCATCTTCTCCGTTCCCTCTACCTTCCAAATCCACTGCTCCCTCTGTTCGCCGATTCTCGCTCGCCAGG
TCTCCGTCGGAGCTGGGATGTGTTCAATCCCTTTTGCCATTTCACGACGCGGTTGCTGGAGCGAGAATGATTTCGTGTCTGAGTACAAATTCGAGGAGTTGTCGTGCGCT
TTCTCAGGGTATTCTCTGCTGCACCTCTCCCGGCCTCTAACATGAAATATTATGCTTTCTTTTGAAGTAGTTAGGTTTATCCGTTCCAAGGTGACTTTTTCCGGCAAATT
GTTGCAGTGACAAGGAGATATCAGTAATGGTTTAGAGGATTTCTTTTATGAACTGTGCCGAATACTGCTCAATTTGGTTAACTAATTTTGATTCATCCAAACGACAGATT
GTGTTGAAATAAGAATATAGTGATTCTAGTTCTCATGGCAACTCAGGAAATCATACTTTTGCCATTGTTGTGGGTTATAAATCTTTGATCCTTTTCATACATTCAATATG
TACGTTTATTATTTATTAAGATACACATCATATTATTTTTTTGCCTTTTGGTATATTATGAAGACAAATTGGATCTTTTTTGCGTACTTCTTTGACAACTAAGAAAATGA
GGCCTGC
Protein sequenceShow/hide protein sequence
MASACQRIASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPGL