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CSPI03G02870 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G02870
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionHydrophob_seed domain-containing protein
Genome locationChr3:2252818..2253377
RNA-Seq ExpressionCSPI03G02870
SyntenyCSPI03G02870
Gene Ontology termsNA
InterPro domainsIPR027923 - Hydrophobic seed protein domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577623.1 putative lipid-binding protein AIR1B, partial [Cucurbita argyrosperma subsp. sororia]3.2e-0843.59Show/hide
Query:  SSSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPT-TNCSGN---VSACASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPIS
        SS   S  LALF CLNL LF SL  AQP+VP  SP+ T+C      V  CA V+ F+++  GS   V PCC +IQGL A  A  C+  +L L   +N ++
Subjt:  SSSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPT-TNCSGN---VSACASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPIS

Query:  VNTSVDAMLDILVNTCN
         N +V     I++N CN
Subjt:  VNTSVDAMLDILVNTCN

KGN55884.1 hypothetical protein Csa_009554 [Cucumis sativus]4.3e-5399.13Show/hide
Query:  MSSSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNT
        MSSSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNT
Subjt:  MSSSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNT

Query:  SVDAMLDILVNTCNN
        SV+AMLDILVNTCNN
Subjt:  SVDAMLDILVNTCNN

TYK12005.1 14 kDa proline-rich protein DC2.15-like [Cucumis melo var. makuwa]3.4e-1852.07Show/hide
Query:  MSSSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTT---NCS-GNVSACASVIGFITVSAGS-QEPVRPCCDLIQGLVATNAKICLNLALDLAVD--I
        MSS +K FSLALF+CL   LFSSLAIAQPIVP  SPTT   NCS  NV  CA+V+ ++ V+ GS  + +RPCCD+I+GLVA  A +C++ A+D+ V+  +
Subjt:  MSSSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTT---NCS-GNVSACASVIGFITVSAGS-QEPVRPCCDLIQGLVATNAKICLNLALDLAVD--I

Query:  NPISVNTSVDAMLDILVNTCN
         P+ +N S + +L+IL   CN
Subjt:  NPISVNTSVDAMLDILVNTCN

XP_011652719.2 putative lipid-binding protein AIR1B [Cucumis sativus]4.3e-2156.78Show/hide
Query:  MSSSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPIS---
        MSSS+KSFSLALFFCLNLILFSSLAIAQPIVP SSPT NCS NV  CASV+  + ++ G  + + PCC LIQGL A    IC+  A+  A+  +      
Subjt:  MSSSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPIS---

Query:  VNTSVDA-MLDILVNTCN
        VN SV++ +L IL++ CN
Subjt:  VNTSVDA-MLDILVNTCN

XP_022759926.1 14 kDa proline-rich protein DC2.15-like isoform X1 [Durio zibethinus]2.1e-0737.8Show/hide
Query:  SSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVS---------------ACASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLAL
        +S KS SLALFF LN ILF SL  A+   P   P  N + + S                CA V+G + V+ GS  PV+PCC LIQGL    A +C    L
Subjt:  SSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVS---------------ACASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLAL

Query:  DLAVDINPISVNTSVDAMLDILVNTCN
          A+  N + +N ++   L +L+N C+
Subjt:  DLAVDINPISVNTSVDAMLDILVNTCN

TrEMBL top hitse value%identityAlignment
A0A0A0L1L8 Hydrophob_seed domain-containing protein1.6e-2156.78Show/hide
Query:  MSSSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLAL--DLAVDINPI-S
        MSSS+KSFSLALFFCLNLILFSSLAIAQPIVP SSPT NCS NV  CASV+  + ++ G  + + PCC LIQGL A    IC+  A+  +L   ++ +  
Subjt:  MSSSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLAL--DLAVDINPI-S

Query:  VNTSVDA-MLDILVNTCN
        VN SV++ +L IL++ CN
Subjt:  VNTSVDA-MLDILVNTCN

A0A0A0L4B3 Hydrophob_seed domain-containing protein2.1e-5399.13Show/hide
Query:  MSSSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNT
        MSSSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNT
Subjt:  MSSSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNT

Query:  SVDAMLDILVNTCNN
        SV+AMLDILVNTCNN
Subjt:  SVDAMLDILVNTCNN

A0A5D3CKE8 14 kDa proline-rich protein DC2.15-like1.6e-1852.07Show/hide
Query:  MSSSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTT---NCS-GNVSACASVIGFITVSAGS-QEPVRPCCDLIQGLVATNAKICLNLALDLAVD--I
        MSS +K FSLALF+CL   LFSSLAIAQPIVP  SPTT   NCS  NV  CA+V+ ++ V+ GS  + +RPCCD+I+GLVA  A +C++ A+D+ V+  +
Subjt:  MSSSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTT---NCS-GNVSACASVIGFITVSAGS-QEPVRPCCDLIQGLVATNAKICLNLALDLAVD--I

Query:  NPISVNTSVDAMLDILVNTCN
         P+ +N S + +L+IL   CN
Subjt:  NPISVNTSVDAMLDILVNTCN

A0A6P6A559 14 kDa proline-rich protein DC2.15-like isoform X21.3e-0740.18Show/hide
Query:  SSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSV
        +S KS SLALFF LN ILF SL  A+   P  +        +  CA V+G + V+ GS  PV+PCC LIQGL    A +C    L  A+  N + +N ++
Subjt:  SSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSV

Query:  DAMLDILVNTCN
           L +L+N C+
Subjt:  DAMLDILVNTCN

A0A6P6A5B7 14 kDa proline-rich protein DC2.15-like isoform X11.0e-0737.8Show/hide
Query:  SSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVS---------------ACASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLAL
        +S KS SLALFF LN ILF SL  A+   P   P  N + + S                CA V+G + V+ GS  PV+PCC LIQGL    A +C    L
Subjt:  SSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVS---------------ACASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLAL

Query:  DLAVDINPISVNTSVDAMLDILVNTCN
          A+  N + +N ++   L +L+N C+
Subjt:  DLAVDINPISVNTSVDAMLDILVNTCN

SwissProt top hitse value%identityAlignment
Q39176 Lipid transfer protein EARLI 11.2e-0529.19Show/hide
Query:  SSDKSFSLALFFCLNLILFS-----------------------------------SLAIAQPIVPESSP-------TTNCSGN-------VSACASVIGF
        +S  S S+ALFF LN+I F+                                   S ++  P VP  +P       T   SGN       +  CA+V+  
Subjt:  SSDKSFSLALFFCLNLILFS-----------------------------------SLAIAQPIVPESSP-------TTNCSGN-------VSACASVIGF

Query:  ITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVDAMLDILVNTCN
        +      Q   +PCC LIQGLV  +A ICL  AL      N + +N +V   L +L+N CN
Subjt:  ITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVDAMLDILVNTCN

Q9S7I2 Putative lipid-binding protein AIR11.5e-0530.48Show/hide
Query:  LALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVDAMLDIL
        LALF  LNL+ F+  +      P++S        +  C +V+  + ++ G+  PV+PCC LIQGL    A +CL  A+  ++ +  +++N  ++  L +L
Subjt:  LALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVDAMLDIL

Query:  VNTCN
        +N C+
Subjt:  VNTCN

Q9SU33 pEARLI1-like lipid transfer protein 39.0e-0636.19Show/hide
Query:  AIAQPIVPESSP-------TTNCSGN-------VSACASVI-GFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVDAMLDIL
        ++  P VP  +P       T   SGN       +  CA+V+ G + V  G Q   +PCC LIQGLV  +A ICL  AL      N + +N +V   L +L
Subjt:  AIAQPIVPESSP-------TTNCSGN-------VSACASVI-GFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVDAMLDIL

Query:  VNTCN
        +N CN
Subjt:  VNTCN

Q9SU34 pEARLI1-like lipid transfer protein 23.1e-0636.96Show/hide
Query:  PIVPESSP--TTNC---SGNVSACASVI-GFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVDAMLDILVNTCN
        P++P  +P  + NC   +  +  CA+V+ G + V  G   P +PCC LIQGLV  +A +CL  AL      N + +N +V   L +L+N CN
Subjt:  PIVPESSP--TTNC---SGNVSACASVI-GFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVDAMLDILVNTCN

Q9ZSP6 Putative lipid-binding protein AIR1B3.7e-0734.91Show/hide
Query:  SLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVDAMLDI
        SLALF  LNL+ F+           S+ T  C   +S CA+V+  + ++ G+  PV+PCC LIQGL    A  CL  AL  ++ +  +++N  ++  L +
Subjt:  SLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVDAMLDI

Query:  LVNTCN
        L+N C+
Subjt:  LVNTCN

Arabidopsis top hitse value%identityAlignment
AT1G12090.1 extensin-like protein2.4e-0629.77Show/hide
Query:  SFSLALFFCLNLILFSSLAIA-------------------QPIVPESSPTTNCSGN---VSACASVI-GFITVSAGSQEPVRPCCDLIQGLVATNAKICL
        S S+ALF  LNL+ F++++                     +P    SS ++ C  +   +  CA+V+ G + ++ G + PV PCC LIQGL    A +CL
Subjt:  SFSLALFFCLNLILFSSLAIA-------------------QPIVPESSPTTNCSGN---VSACASVI-GFITVSAGSQEPVRPCCDLIQGLVATNAKICL

Query:  NLALDLAVDINPISVNTSVDAMLDILVNTCN
          AL      N + +N ++   L +L+N C+
Subjt:  NLALDLAVDINPISVNTSVDAMLDILVNTCN

AT4G12480.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein8.4e-0729.19Show/hide
Query:  SSDKSFSLALFFCLNLILFS-----------------------------------SLAIAQPIVPESSP-------TTNCSGN-------VSACASVIGF
        +S  S S+ALFF LN+I F+                                   S ++  P VP  +P       T   SGN       +  CA+V+  
Subjt:  SSDKSFSLALFFCLNLILFS-----------------------------------SLAIAQPIVPESSP-------TTNCSGN-------VSACASVIGF

Query:  ITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVDAMLDILVNTCN
        +      Q   +PCC LIQGLV  +A ICL  AL      N + +N +V   L +L+N CN
Subjt:  ITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVDAMLDILVNTCN

AT4G12490.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.2e-0736.96Show/hide
Query:  PIVPESSP--TTNC---SGNVSACASVI-GFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVDAMLDILVNTCN
        P++P  +P  + NC   +  +  CA+V+ G + V  G   P +PCC LIQGLV  +A +CL  AL      N + +N +V   L +L+N CN
Subjt:  PIVPESSP--TTNC---SGNVSACASVI-GFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVDAMLDILVNTCN

AT4G12545.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.6e-0834.91Show/hide
Query:  SLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVDAMLDI
        SLALF  LNL+ F+           S+ T  C   +S CA+V+  + ++ G+  PV+PCC LIQGL    A  CL  AL  ++ +  +++N  ++  L +
Subjt:  SLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVDAMLDI

Query:  LVNTCN
        L+N C+
Subjt:  LVNTCN

AT4G12550.1 Auxin-Induced in Root cultures 11.1e-0630.48Show/hide
Query:  LALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVDAMLDIL
        LALF  LNL+ F+  +      P++S        +  C +V+  + ++ G+  PV+PCC LIQGL    A +CL  A+  ++ +  +++N  ++  L +L
Subjt:  LALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVDAMLDIL

Query:  VNTCN
        +N C+
Subjt:  VNTCN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCTCCGACAAATCCTTTTCACTTGCTCTCTTCTTCTGTCTCAACCTAATTCTCTTCTCTTCTCTTGCCATTGCTCAACCAATTGTACCAGAGTCGAGCCCGAC
CACCAATTGCTCCGGCAATGTAAGTGCGTGTGCAAGTGTAATTGGTTTTATTACTGTATCCGCTGGCTCTCAGGAACCCGTACGTCCATGTTGTGATTTGATTCAAGGGC
TAGTAGCTACTAATGCTAAGATTTGTTTAAACTTGGCCCTAGATCTTGCAGTAGATATTAATCCAATCTCTGTCAACACATCCGTTGATGCCATGCTCGATATATTGGTT
AACACATGCAATAATTGA
mRNA sequenceShow/hide mRNA sequence
TTCATAAACAAAAACCATTTCACTCCAAACAGTTTCATTTTTCTTCTTCTCTTCAAAAAAAAAAAAAAGAAAAGAAAAATGTCTTCCTCCGACAAATCCTTTTCACTTGC
TCTCTTCTTCTGTCTCAACCTAATTCTCTTCTCTTCTCTTGCCATTGCTCAACCAATTGTACCAGAGTCGAGCCCGACCACCAATTGCTCCGGCAATGTAAGTGCGTGTG
CAAGTGTAATTGGTTTTATTACTGTATCCGCTGGCTCTCAGGAACCCGTACGTCCATGTTGTGATTTGATTCAAGGGCTAGTAGCTACTAATGCTAAGATTTGTTTAAAC
TTGGCCCTAGATCTTGCAGTAGATATTAATCCAATCTCTGTCAACACATCCGTTGATGCCATGCTCGATATATTGGTTAACACATGCAATAATTGAACTCTAATCGTCTA
ATTCAGTCTGTACAACTTCAAAATGAGAGAATAAAATAAGAAGTTGTAATACTTTATTTTATGTCTGCACCTATGTTTTTTAAGTTCCATAATTTGAAGCCGAAGTTTGG
AGGTTAGGAT
Protein sequenceShow/hide protein sequence
MSSSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVDAMLDILV
NTCNN