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CSPI03G03220 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G03220
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionprotein cornichon homolog 4-like
Genome locationChr3:2610237..2612711
RNA-Seq ExpressionCSPI03G03220
SyntenyCSPI03G03220
Gene Ontology termsGO:0016192 - vesicle-mediated transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR003377 - Cornichon


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7028361.1 Protein cornichon-like 4 [Cucurbita argyrosperma subsp. argyrosperma]1.0e-4867.88Show/hide
Query:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLYLMLDTMIIHMASLL
        M DLYVWLVSFFFLIALLIVL+YQLMCLADLEFDYINP+DSASRINKVI PEFI MGVLCLFYLLTGHWGMS+L GPYIYYNV                 
Subjt:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLYLMLDTMIIHMASLL

Query:  SVGSVDHVGIWLELALFPSQKMHVIPTKTAPDRCYRDIQYAKLGKEATAFQTSLSSCPPLPFYIL
                                  TKTAPDRCYRDIQYAKLGKEATAFQTSLSS PPLP  IL
Subjt:  SVGSVDHVGIWLELALFPSQKMHVIPTKTAPDRCYRDIQYAKLGKEATAFQTSLSSCPPLPFYIL

XP_004147951.1 protein cornichon homolog 4 [Cucumis sativus]1.2e-3894.62Show/hide
Query:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLYLMLDTMI
        MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLYL    +I
Subjt:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLYLMLDTMI

XP_008448916.1 PREDICTED: protein cornichon homolog 4 isoform X1 [Cucumis melo]5.1e-3794.25Show/hide
Query:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLYL
        MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINP+DSASRINKVIMPEF+ MGVLCLFYLLTGHWGMS+L GPYIYYNVRLYL
Subjt:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLYL

XP_023005595.1 protein cornichon homolog 4-like [Cucurbita maxima]4.8e-3586.02Show/hide
Query:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLYLMLDTMI
        M DLYVWLVSFFFLIALLIVL+YQLMCLADLEFDYINP+DSASRINKVI PEFI MGVLCLFYLLTGHWGMS+L GPYIYYNVR+YL    +I
Subjt:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLYLMLDTMI

XP_023539252.1 protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo]3.7e-3590.8Show/hide
Query:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLYL
        M DLYVWLVSFFFLIALLIVL+YQLMCLADLEFDYINP+DSASRINKVI PEFI MGVLCLFYLLTGHWGMS+L GPYIYYNVR+YL
Subjt:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLYL

TrEMBL top hitse value%identityAlignment
A0A0A0L2G6 Uncharacterized protein5.9e-3994.62Show/hide
Query:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLYLMLDTMI
        MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLYL    +I
Subjt:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLYLMLDTMI

A0A1S3BLR3 protein cornichon homolog 4 isoform X12.5e-3794.25Show/hide
Query:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLYL
        MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINP+DSASRINKVIMPEF+ MGVLCLFYLLTGHWGMS+L GPYIYYNVRLYL
Subjt:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLYL

A0A6J1FRW5 protein cornichon homolog 4-like6.8e-3584.95Show/hide
Query:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLYLMLDTMI
        M DLYVWLVSFFFLIALLIVL+YQLMCLADLEFDYINP+DSAS+INKVI PEFI MGVLCLFYLLTGHWGMS+L GPYIYYNVR+YL    +I
Subjt:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLYLMLDTMI

A0A6J1HL36 protein cornichon homolog 4-like2.0e-3487.36Show/hide
Query:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLYL
        M DL+VWL+SFF L+ALLIVLVYQLMCLADLEFDYINP+DSASRINKV+MPEFI +GVLCLFYLLTGHWGMS+L GPYIYYNVRLYL
Subjt:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLYL

A0A6J1KXU1 protein cornichon homolog 4-like2.3e-3586.02Show/hide
Query:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLYLMLDTMI
        M DLYVWLVSFFFLIALLIVL+YQLMCLADLEFDYINP+DSASRINKVI PEFI MGVLCLFYLLTGHWGMS+L GPYIYYNVR+YL    +I
Subjt:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLYLMLDTMI

SwissProt top hitse value%identityAlignment
Q3EDD7 Probable protein cornichon homolog 29.8e-2373.85Show/hide
Query:  VYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLY
        ++ L+CLADLEFDYINP+DSASRIN V++PEFIV GVLC+FYLLTGHW M+LL  PY+YYN  LY
Subjt:  VYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLY

Q84W04 Protein cornichon homolog 43.7e-3073.26Show/hide
Query:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLY
        M D++ WL+SFFFLIAL+ ++VYQL+CLADLEFDYINP+DSASRIN V++PEFIV GVLC+FYLLTGHW M+LL  PY+YYN  LY
Subjt:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLY

Q8GWT5 Protein cornichon homolog 35.2e-2462.79Show/hide
Query:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLY
        M +++ W++SF  LI LL ++VYQL+ LADLEFDYINP+DSASRIN V++PE I+ G LC+FYL+TGHW M+LL  PY+YYN  LY
Subjt:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLY

Q9C7D7 Protein cornichon homolog 11.6e-1750Show/hide
Query:  DLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLY
        DL++W+VSFF  +AL+  + YQ++CL DLE DY+NPF++++RIN++++PEFI+ G LCL +LLT HW   L++ P   Y+  LY
Subjt:  DLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLY

Q9SZ74 Protein cornichon homolog 51.4e-2458.62Show/hide
Query:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLYL
        M DL  W++SF FL  L+I+++YQL CLADLEFD INP+D +SRIN++++PEF + G+LCL+Y+LTGHW M++LS P+++YN+RLY+
Subjt:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLYL

Arabidopsis top hitse value%identityAlignment
AT1G12340.1 Cornichon family protein6.9e-2473.85Show/hide
Query:  VYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLY
        ++ L+CLADLEFDYINP+DSASRIN V++PEFIV GVLC+FYLLTGHW M+LL  PY+YYN  LY
Subjt:  VYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLY

AT1G12390.1 Cornichon family protein2.6e-3173.26Show/hide
Query:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLY
        M D++ WL+SFFFLIAL+ ++VYQL+CLADLEFDYINP+DSASRIN V++PEFIV GVLC+FYLLTGHW M+LL  PY+YYN  LY
Subjt:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLY

AT1G62880.1 Cornichon family protein3.7e-2562.79Show/hide
Query:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLY
        M +++ W++SF  LI LL ++VYQL+ LADLEFDYINP+DSASRIN V++PE I+ G LC+FYL+TGHW M+LL  PY+YYN  LY
Subjt:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLY

AT3G12180.1 Cornichon family protein1.1e-1850Show/hide
Query:  DLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLY
        DL++W+VSFF  +AL+  + YQ++CL DLE DY+NPF++++RIN++++PEFI+ G LCL +LLT HW   L++ P   Y+  LY
Subjt:  DLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLY

AT4G12090.1 Cornichon family protein9.7e-2658.62Show/hide
Query:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLYL
        M DL  W++SF FL  L+I+++YQL CLADLEFD INP+D +SRIN++++PEF + G+LCL+Y+LTGHW M++LS P+++YN+RLY+
Subjt:  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLYL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATCTATATGTGTGGCTTGTATCATTCTTCTTCCTCATTGCTCTTCTTATTGTCCTTGTTTATCAGCTCATGTGCTTGGCAGATCTCGAGTTTGATTATATCAA
CCCTTTTGACTCTGCTTCTAGAATAAATAAAGTGATTATGCCGGAGTTCATTGTTATGGGAGTTTTGTGCCTCTTCTATCTTTTAACAGGGCATTGGGGTATGTCATTGT
TATCTGGGCCCTACATATACTATAATGTGAGACTATACTTGATGTTAGATACGATGATTATTCACATGGCTAGCTTACTGTCAGTGGGTAGCGTAGATCATGTTGGTATA
TGGTTAGAGCTTGCTTTATTTCCATCCCAGAAAATGCACGTGATACCTACGAAGACAGCACCTGATAGATGTTACAGAGATATTCAATATGCTAAACTGGGAAAAGAAGC
AACGGCTTTTCAAACTAGCCTATCTAGTTGTCCTCCTCTTCCTTTCTATATTCTGAGAAACAATGGCTTGCATGCAGTTGTTGATTGTATCTCAACGGTTGTTCCCATTA
GTTGTGAGTTGAATTTCTATCCTCCAGTACCTTTTCTTTTTCTGAAGCTGCTGCACTTTGAGGATTTCATTGACATTCTTGTTTGGGTTGGGAACTTCATTTGTATTCTG
GACTCTAGAGAGAGGTTTAGAAAGCAGATTTCACGTCAGTACTGTTCTATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGATCTATATGTGTGGCTTGTATCATTCTTCTTCCTCATTGCTCTTCTTATTGTCCTTGTTTATCAGCTCATGTGCTTGGCAGATCTCGAGTTTGATTATATCAA
CCCTTTTGACTCTGCTTCTAGAATAAATAAAGTGATTATGCCGGAGTTCATTGTTATGGGAGTTTTGTGCCTCTTCTATCTTTTAACAGGGCATTGGGGTATGTCATTGT
TATCTGGGCCCTACATATACTATAATGTGAGACTATACTTGATGTTAGATACGATGATTATTCACATGGCTAGCTTACTGTCAGTGGGTAGCGTAGATCATGTTGGTATA
TGGTTAGAGCTTGCTTTATTTCCATCCCAGAAAATGCACGTGATACCTACGAAGACAGCACCTGATAGATGTTACAGAGATATTCAATATGCTAAACTGGGAAAAGAAGC
AACGGCTTTTCAAACTAGCCTATCTAGTTGTCCTCCTCTTCCTTTCTATATTCTGAGAAACAATGGCTTGCATGCAGTTGTTGATTGTATCTCAACGGTTGTTCCCATTA
GTTGTGAGTTGAATTTCTATCCTCCAGTACCTTTTCTTTTTCTGAAGCTGCTGCACTTTGAGGATTTCATTGACATTCTTGTTTGGGTTGGGAACTTCATTTGTATTCTG
GACTCTAGAGAGAGGTTTAGAAAGCAGATTTCACGTCAGTACTGTTCTATTTAG
Protein sequenceShow/hide protein sequence
MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYNVRLYLMLDTMIIHMASLLSVGSVDHVGI
WLELALFPSQKMHVIPTKTAPDRCYRDIQYAKLGKEATAFQTSLSSCPPLPFYILRNNGLHAVVDCISTVVPISCELNFYPPVPFLFLKLLHFEDFIDILVWVGNFICIL
DSRERFRKQISRQYCSI