; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G03240 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G03240
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionacidic leucine-rich nuclear phosphoprotein 32 family member B-like
Genome locationChr3:2622532..2622957
RNA-Seq ExpressionCSPI03G03240
SyntenyCSPI03G03240
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650077.1 hypothetical protein Csa_010314 [Cucumis sativus]7.5e-68100Show/hide
Query:  MRNHEEPQPHEQFDIMELILQLSPYHNKPHHQDTEFHDDHKDKRVEDDDGDVNTDDQYDNRNEKEDKVSDEDEMKEWDEKEGEDDEYDEAEGWDEEEEDE
        MRNHEEPQPHEQFDIMELILQLSPYHNKPHHQDTEFHDDHKDKRVEDDDGDVNTDDQYDNRNEKEDKVSDEDEMKEWDEKEGEDDEYDEAEGWDEEEEDE
Subjt:  MRNHEEPQPHEQFDIMELILQLSPYHNKPHHQDTEFHDDHKDKRVEDDDGDVNTDDQYDNRNEKEDKVSDEDEMKEWDEKEGEDDEYDEAEGWDEEEEDE

Query:  ELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTNNVTNISN
        ELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTNNVTNISN
Subjt:  ELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTNNVTNISN

KAG6577589.1 hypothetical protein SDJN03_25163, partial [Cucurbita argyrosperma subsp. sororia]1.2e-0443.65Show/hide
Query:  QDTEFHDDHKDKRVEDDDGDVNTD-----------DQYDNRNEKEDKVSDEDEMKEWDEKEG-------EDDE------YDEAEGWD--EEEEDEELEMR
        QD EF    +D+   +DD D N D           D+ +  NE++++ +D D   E ++++G       E+DE       DE E WD  EEEE+EEL  R
Subjt:  QDTEFHDDHKDKRVEDDDGDVNTD-----------DQYDNRNEKEDKVSDEDEMKEWDEKEG-------EDDE------YDEAEGWD--EEEEDEELEMR

Query:  IEEFIAKVNKRWREEKLRDHLLIQIC
        IEEFIAK NKRWREEKLRD+L  QIC
Subjt:  IEEFIAKVNKRWREEKLRDHLLIQIC

TYK19467.1 hypothetical protein E5676_scaffold443G001210 [Cucumis melo var. makuwa]3.7e-4378.77Show/hide
Query:  MRNHEEPQ-PHEQFDIM--ELILQLSPYHNKPHHQDTEFHDDHKDKRVEDDDGDVNTDDQYDNRNEKEDK-VSD-EDEMKEWDEKEGEDDEYDEAEGWDE
        MRNHEEPQ PHEQF+IM  +LIL+LSPYHNKPHHQDT   DD       DD  + NTDDQYDNRNEKEDK +SD EDEMKEWDEKEGE+DEY EAE WDE
Subjt:  MRNHEEPQ-PHEQFDIM--ELILQLSPYHNKPHHQDTEFHDDHKDKRVEDDDGDVNTDDQYDNRNEKEDK-VSD-EDEMKEWDEKEGEDDEYDEAEGWDE

Query:  EEEDEELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTNNVTNISN
        EEEDEELE RIEEFIAKVNKRWREEKLRDHLLIQICSTN ++N SN
Subjt:  EEEDEELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTNNVTNISN

XP_023005569.1 acidic leucine-rich nuclear phosphoprotein 32 family member B-like [Cucurbita maxima]2.1e-0639.73Show/hide
Query:  PHEQFDIME--LILQLSPYHNKPHHQDTEFHDDHKDKRVE-----------------DDDGDVNTDDQYDNRNEKED-KVSDEDEMKEWDEKEGEDDEYD
        PH  F I    ++L +  YH  P HQ + +H       +E                 DD+ D + + + D++NEK++ +  +EDE ++ DE++ + D+ D
Subjt:  PHEQFDIME--LILQLSPYHNKPHHQDTEFHDDHKDKRVE-----------------DDDGDVNTDDQYDNRNEKED-KVSDEDEMKEWDEKEGEDDEYD

Query:  EAEGWDEEEEDEELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTN
        + E  DE++ D+ELE RIEEFIAKVNKRWREEKLRD+L  Q CS+N
Subjt:  EAEGWDEEEEDEELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTN

XP_038876855.1 glutamic acid-rich protein-like [Benincasa hispida]5.2e-2967.83Show/hide
Query:  MRNHEEPQPHEQFDIMELILQLSPYHNKPHHQDTEFH--DDHKDKRVEDDDGDVNTDDQYDNRNEKEDKVSDEDEMKEWDEKEGEDDEYDEAEGWDEEEE
        MRNH EP P EQF+IMEL LQLSPYH KP HQD EF   D  +D R ED+D D N   +Y N+NEKED+ +DEDE+K+ +EKE ED++ D  E  D EEE
Subjt:  MRNHEEPQPHEQFDIMELILQLSPYHNKPHHQDTEFH--DDHKDKRVEDDDGDVNTDDQYDNRNEKEDKVSDEDEMKEWDEKEGEDDEYDEAEGWDEEEE

Query:  DEELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTNNVTNISN
        DEELE RIEEFIAKVNKRWREEKLRDHLLIQICS NNV++ SN
Subjt:  DEELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTNNVTNISN

TrEMBL top hitse value%identityAlignment
A0A0A0L728 Uncharacterized protein3.6e-68100Show/hide
Query:  MRNHEEPQPHEQFDIMELILQLSPYHNKPHHQDTEFHDDHKDKRVEDDDGDVNTDDQYDNRNEKEDKVSDEDEMKEWDEKEGEDDEYDEAEGWDEEEEDE
        MRNHEEPQPHEQFDIMELILQLSPYHNKPHHQDTEFHDDHKDKRVEDDDGDVNTDDQYDNRNEKEDKVSDEDEMKEWDEKEGEDDEYDEAEGWDEEEEDE
Subjt:  MRNHEEPQPHEQFDIMELILQLSPYHNKPHHQDTEFHDDHKDKRVEDDDGDVNTDDQYDNRNEKEDKVSDEDEMKEWDEKEGEDDEYDEAEGWDEEEEDE

Query:  ELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTNNVTNISN
        ELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTNNVTNISN
Subjt:  ELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTNNVTNISN

A0A5D3D7D0 Uncharacterized protein1.8e-4378.77Show/hide
Query:  MRNHEEPQ-PHEQFDIM--ELILQLSPYHNKPHHQDTEFHDDHKDKRVEDDDGDVNTDDQYDNRNEKEDK-VSD-EDEMKEWDEKEGEDDEYDEAEGWDE
        MRNHEEPQ PHEQF+IM  +LIL+LSPYHNKPHHQDT   DD       DD  + NTDDQYDNRNEKEDK +SD EDEMKEWDEKEGE+DEY EAE WDE
Subjt:  MRNHEEPQ-PHEQFDIM--ELILQLSPYHNKPHHQDTEFHDDHKDKRVEDDDGDVNTDDQYDNRNEKEDK-VSD-EDEMKEWDEKEGEDDEYDEAEGWDE

Query:  EEEDEELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTNNVTNISN
        EEEDEELE RIEEFIAKVNKRWREEKLRDHLLIQICSTN ++N SN
Subjt:  EEEDEELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTNNVTNISN

A0A6J1KZL9 acidic leucine-rich nuclear phosphoprotein 32 family member B-like1.0e-0639.73Show/hide
Query:  PHEQFDIME--LILQLSPYHNKPHHQDTEFHDDHKDKRVE-----------------DDDGDVNTDDQYDNRNEKED-KVSDEDEMKEWDEKEGEDDEYD
        PH  F I    ++L +  YH  P HQ + +H       +E                 DD+ D + + + D++NEK++ +  +EDE ++ DE++ + D+ D
Subjt:  PHEQFDIME--LILQLSPYHNKPHHQDTEFHDDHKDKRVE-----------------DDDGDVNTDDQYDNRNEKED-KVSDEDEMKEWDEKEGEDDEYD

Query:  EAEGWDEEEEDEELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTN
        + E  DE++ D+ELE RIEEFIAKVNKRWREEKLRD+L  Q CS+N
Subjt:  EAEGWDEEEEDEELEMRIEEFIAKVNKRWREEKLRDHLLIQICSTN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAACCATGAGGAGCCACAACCTCATGAACAATTTGATATAATGGAACTTATTCTTCAATTATCTCCCTATCATAATAAGCCCCATCATCAAGATACTGAATTTCA
TGACGATCACAAAGATAAAAGAGTAGAAGACGATGATGGAGATGTAAACACTGACGATCAATATGACAACCGAAATGAGAAAGAAGACAAGGTCAGTGATGAAGATGAAA
TGAAGGAATGGGATGAGAAAGAAGGTGAAGATGATGAATATGATGAGGCCGAGGGGTGGGACGAGGAAGAAGAAGATGAAGAGTTGGAGATGAGGATTGAAGAGTTCATA
GCAAAGGTGAACAAGAGATGGAGAGAAGAGAAGTTAAGGGACCATTTGCTTATTCAAATTTGTTCTACTAATAATGTTACTAATATCTCAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAAACCATGAGGAGCCACAACCTCATGAACAATTTGATATAATGGAACTTATTCTTCAATTATCTCCCTATCATAATAAGCCCCATCATCAAGATACTGAATTTCA
TGACGATCACAAAGATAAAAGAGTAGAAGACGATGATGGAGATGTAAACACTGACGATCAATATGACAACCGAAATGAGAAAGAAGACAAGGTCAGTGATGAAGATGAAA
TGAAGGAATGGGATGAGAAAGAAGGTGAAGATGATGAATATGATGAGGCCGAGGGGTGGGACGAGGAAGAAGAAGATGAAGAGTTGGAGATGAGGATTGAAGAGTTCATA
GCAAAGGTGAACAAGAGATGGAGAGAAGAGAAGTTAAGGGACCATTTGCTTATTCAAATTTGTTCTACTAATAATGTTACTAATATCTCAAATTAA
Protein sequenceShow/hide protein sequence
MRNHEEPQPHEQFDIMELILQLSPYHNKPHHQDTEFHDDHKDKRVEDDDGDVNTDDQYDNRNEKEDKVSDEDEMKEWDEKEGEDDEYDEAEGWDEEEEDEELEMRIEEFI
AKVNKRWREEKLRDHLLIQICSTNNVTNISN