; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G03270 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G03270
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionycf49-like protein
Genome locationChr3:2653343..2655755
RNA-Seq ExpressionCSPI03G03270
SyntenyCSPI03G03270
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR019634 - Uncharacterised protein family Ycf49


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015633.1 hypothetical protein SDJN02_23270, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-7377.32Show/hide
Query:  MSLTSPLLYSFSIPKSP--------LPISTDFAPTFQLPTGVSFRRPISRLGFPSKTMVVLLGTGFTLALLGPESASAATELSSSLLFNEPQNALSLPTW
        MS +S  L+SFSIPK P        LP S D A T QLPTG+  RR  +     SK++VVLLGTGFTL+LLGP   SAATE  SSLLFNEPQNALSLPTW
Subjt:  MSLTSPLLYSFSIPKSP--------LPISTDFAPTFQLPTGVSFRRPISRLGFPSKTMVVLLGTGFTLALLGPESASAATELSSSLLFNEPQNALSLPTW

Query:  AIHVSSVVEWITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSKNL
        A+HVS VVEWI AMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACT HFFYNSESLEVLVA+QAMLT IGNATMCIAAFRIYKSSQERSKNL
Subjt:  AIHVSSVVEWITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSKNL

TYK19464.1 ycf49-like protein [Cucumis melo var. makuwa]2.8e-9494.33Show/hide
Query:  MSLTSPLLYSFSIPKSPLPISTDFAPTFQLPTGVSFRRPISRLGFPSKTMVVLLGTGFTLALLGPESASAATELSSSLLFNEPQNALSLPTWAIHVSSVV
        MSLTSPLLYSFSIPKSPLPISTDFAPT QLPTGVSFRRPISRLGFPSK MVVLLGTGFTLALLGPESASAATEL SSLLFNEPQNALSLPTWAIHVSSVV
Subjt:  MSLTSPLLYSFSIPKSPLPISTDFAPTFQLPTGVSFRRPISRLGFPSKTMVVLLGTGFTLALLGPESASAATELSSSLLFNEPQNALSLPTWAIHVSSVV

Query:  EW--------ITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSKNL
        EW        ITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSKNL
Subjt:  EW--------ITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSKNL

XP_004147956.1 uncharacterized protein LOC101205605 [Cucumis sativus]1.8e-98100Show/hide
Query:  MSLTSPLLYSFSIPKSPLPISTDFAPTFQLPTGVSFRRPISRLGFPSKTMVVLLGTGFTLALLGPESASAATELSSSLLFNEPQNALSLPTWAIHVSSVV
        MSLTSPLLYSFSIPKSPLPISTDFAPTFQLPTGVSFRRPISRLGFPSKTMVVLLGTGFTLALLGPESASAATELSSSLLFNEPQNALSLPTWAIHVSSVV
Subjt:  MSLTSPLLYSFSIPKSPLPISTDFAPTFQLPTGVSFRRPISRLGFPSKTMVVLLGTGFTLALLGPESASAATELSSSLLFNEPQNALSLPTWAIHVSSVV

Query:  EWITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSKNL
        EWITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSKNL
Subjt:  EWITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSKNL

XP_008448929.1 PREDICTED: ycf49-like protein [Cucumis melo]1.7e-9698.39Show/hide
Query:  MSLTSPLLYSFSIPKSPLPISTDFAPTFQLPTGVSFRRPISRLGFPSKTMVVLLGTGFTLALLGPESASAATELSSSLLFNEPQNALSLPTWAIHVSSVV
        MSLTSPLLYSFSIPKSPLPISTDFAPT QLPTGVSFRRPISRLGFPSK MVVLLGTGFTLALLGPESASAATEL SSLLFNEPQNALSLPTWAIHVSSVV
Subjt:  MSLTSPLLYSFSIPKSPLPISTDFAPTFQLPTGVSFRRPISRLGFPSKTMVVLLGTGFTLALLGPESASAATELSSSLLFNEPQNALSLPTWAIHVSSVV

Query:  EWITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSKNL
        EWITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSKNL
Subjt:  EWITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSKNL

XP_038876845.1 ycf49-like protein [Benincasa hispida]5.6e-7984.41Show/hide
Query:  MSLTSPLLYSFSIPKSPLPISTDFAPTFQLPTGVSFRRPISRLGFPSKTMVVLLGTGFTLALLGPESASAATELSSSLLFNEPQNALSLPTWAIHVSSVV
        MSL+S  LYSFSIPKSP   S+   PT +   G+ FRR  + L F SKTM++ LGTGFTLALLGPESASAAT+L SSLLFNEPQNALSLPTWAIHVSSVV
Subjt:  MSLTSPLLYSFSIPKSPLPISTDFAPTFQLPTGVSFRRPISRLGFPSKTMVVLLGTGFTLALLGPESASAATELSSSLLFNEPQNALSLPTWAIHVSSVV

Query:  EWITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSKNL
        EWITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQE SKNL
Subjt:  EWITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSKNL

TrEMBL top hitse value%identityAlignment
A0A0A0L4G0 Uncharacterized protein8.9e-99100Show/hide
Query:  MSLTSPLLYSFSIPKSPLPISTDFAPTFQLPTGVSFRRPISRLGFPSKTMVVLLGTGFTLALLGPESASAATELSSSLLFNEPQNALSLPTWAIHVSSVV
        MSLTSPLLYSFSIPKSPLPISTDFAPTFQLPTGVSFRRPISRLGFPSKTMVVLLGTGFTLALLGPESASAATELSSSLLFNEPQNALSLPTWAIHVSSVV
Subjt:  MSLTSPLLYSFSIPKSPLPISTDFAPTFQLPTGVSFRRPISRLGFPSKTMVVLLGTGFTLALLGPESASAATELSSSLLFNEPQNALSLPTWAIHVSSVV

Query:  EWITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSKNL
        EWITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSKNL
Subjt:  EWITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSKNL

A0A1S3BLS2 ycf49-like protein8.3e-9798.39Show/hide
Query:  MSLTSPLLYSFSIPKSPLPISTDFAPTFQLPTGVSFRRPISRLGFPSKTMVVLLGTGFTLALLGPESASAATELSSSLLFNEPQNALSLPTWAIHVSSVV
        MSLTSPLLYSFSIPKSPLPISTDFAPT QLPTGVSFRRPISRLGFPSK MVVLLGTGFTLALLGPESASAATEL SSLLFNEPQNALSLPTWAIHVSSVV
Subjt:  MSLTSPLLYSFSIPKSPLPISTDFAPTFQLPTGVSFRRPISRLGFPSKTMVVLLGTGFTLALLGPESASAATELSSSLLFNEPQNALSLPTWAIHVSSVV

Query:  EWITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSKNL
        EWITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSKNL
Subjt:  EWITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSKNL

A0A5D3D7E0 Ycf49-like protein1.3e-9494.33Show/hide
Query:  MSLTSPLLYSFSIPKSPLPISTDFAPTFQLPTGVSFRRPISRLGFPSKTMVVLLGTGFTLALLGPESASAATELSSSLLFNEPQNALSLPTWAIHVSSVV
        MSLTSPLLYSFSIPKSPLPISTDFAPT QLPTGVSFRRPISRLGFPSK MVVLLGTGFTLALLGPESASAATEL SSLLFNEPQNALSLPTWAIHVSSVV
Subjt:  MSLTSPLLYSFSIPKSPLPISTDFAPTFQLPTGVSFRRPISRLGFPSKTMVVLLGTGFTLALLGPESASAATELSSSLLFNEPQNALSLPTWAIHVSSVV

Query:  EW--------ITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSKNL
        EW        ITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSKNL
Subjt:  EW--------ITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSKNL

A0A6J1DH09 uncharacterized protein LOC1110204158.4e-7377.39Show/hide
Query:  MSLTSPLLYSFSIPKSPL--------PISTDFAPTFQLPTGVSFRRPI-SRLGFPSKTMVVLLGTGFTLALLGPESASAATEL----SSSLLFNEPQNAL
        M LTS LL+SFS PK P+        P S DFA   + P G+ FRR I + L   SK+MVVLLGTGFTLALLGPESASAA EL    +SSL FNEPQNAL
Subjt:  MSLTSPLLYSFSIPKSPL--------PISTDFAPTFQLPTGVSFRRPI-SRLGFPSKTMVVLLGTGFTLALLGPESASAATEL----SSSLLFNEPQNAL

Query:  SLPTWAIHVSSVVEWITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSKNL
        SLPTWAIHVSSVVEWITAMALVWQYGEKSGNE+WKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVA+QA+LTA+GNATMCIAAFRIYK SQERS+NL
Subjt:  SLPTWAIHVSSVVEWITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSKNL

A0A6J1E5R7 uncharacterized protein LOC1114310331.9e-7276.68Show/hide
Query:  MSLTSPLLYSFSIPKSP-------LPISTDFAPTFQLPTGVSFRRPISRLGFPSKTMVVLLGTGFTLALLGPESASAATELSSSLLFNEPQNALSLPTWA
        MS +S  L+SFSIPK P       LP S   A T QLPTG+  RR  +     SK+++VLLGTGFTL+ LGP S SAATE  SSLLFNEPQNALSLPTWA
Subjt:  MSLTSPLLYSFSIPKSP-------LPISTDFAPTFQLPTGVSFRRPISRLGFPSKTMVVLLGTGFTLALLGPESASAATELSSSLLFNEPQNALSLPTWA

Query:  IHVSSVVEWITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSKNL
        +HVS VVEWI AMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACT HFFYNSESLEVLVA+QAMLT IGNATMCIAAFRIYKSSQERSKNL
Subjt:  IHVSSVVEWITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSKNL

SwissProt top hitse value%identityAlignment
P15811 Uncharacterized protein ycf495.3e-0833.66Show/hide
Query:  NALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSK
        N LS  TW +H+SSV+EW+  +     Y +   N S K   +        A CACT HFF N      L+ +Q+ LT   N T+  +   IYK    +++
Subjt:  NALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSK

Query:  N
        N
Subjt:  N

Q55720 Ycf49-like protein1.6e-2857.58Show/hide
Query:  NALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERS
        NALS+PTW +HVSSV+EWI A+ALV +Y  K+G   W+ L+WGMVP L  A CACTWHFF N+  L+ LV +QA+ T IGN T+C+AA+ IY+ S + S
Subjt:  NALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERS

Q9TM18 Uncharacterized protein ycf491.6e-0434.94Show/hide
Query:  ALSLPTWAIHVSSVVEWITAMALVW---QYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGN
        +LSLPTW IH+ ++VEW   + L++    + +   + ++  +   +   L G F AC WHFF N+  L  +   QA LTA  N
Subjt:  ALSLPTWAIHVSSVVEWITAMALVW---QYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGN

Arabidopsis top hitse value%identityAlignment
AT4G22830.1 unknown protein4.6e-4757.06Show/hide
Query:  LYSFSIPKSPLPISTDFAPTFQLPTGVSFRRPISRLGFPSKTMVVLLGTGFTLALL---GPESASAATELSSSLLFNEPQNALSLPTWAIHVSSVVEWIT
        ++S S P S L  S +  P  ++ +      P++  G        L+GT    A     GP+ A+A   +  SL  +EP NALSLPTWA+HVSSVVEWIT
Subjt:  LYSFSIPKSPLPISTDFAPTFQLPTGVSFRRPISRLGFPSKTMVVLLGTGFTLALL---GPESASAATELSSSLLFNEPQNALSLPTWAIHVSSVVEWIT

Query:  AMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQE
        AMALVW+YGE+ G ESWKGLSWGMVPLLGGA CACTWHFFYN ESLEVLVA+QA LT  GN T+CIAAFRI K S +
Subjt:  AMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQE

AT4G22830.2 unknown protein6.0e-4757.74Show/hide
Query:  PLPISTDFAPTFQLPTGVSFRRPISRLGFPSKTMVVLLGTGFTLALL---GPESASAATELSSSLLFNEPQNALSLPTWAIHVSSVVEWITAMALVWQYG
        P  ++T   P  ++ +      P++  G        L+GT    A     GP+ A+A   +  SL  +EP NALSLPTWA+HVSSVVEWITAMALVW+YG
Subjt:  PLPISTDFAPTFQLPTGVSFRRPISRLGFPSKTMVVLLGTGFTLALL---GPESASAATELSSSLLFNEPQNALSLPTWAIHVSSVVEWITAMALVWQYG

Query:  EKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQE
        E+ G ESWKGLSWGMVPLLGGA CACTWHFFYN ESLEVLVA+QA LT  GN T+CIAAFRI K S +
Subjt:  EKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACTCACTTCCCCACTCTTGTATTCCTTTTCAATTCCCAAATCCCCACTCCCAATTTCCACAGATTTTGCCCCTACTTTTCAACTTCCTACCGGAGTCTCATTCCG
GCGACCCATCTCCCGTCTGGGTTTTCCCTCCAAAACCATGGTGGTTTTGCTCGGTACGGGTTTCACTCTTGCCCTTTTGGGACCTGAATCCGCTTCTGCTGCCACGGAAT
TGTCATCTTCGCTGCTTTTTAACGAGCCCCAAAATGCTCTCTCCTTGCCCACCTGGGCCATTCATGTTTCCAGCGTTGTTGAATGGATTACAGCAATGGCTTTGGTGTGG
CAATATGGAGAGAAATCTGGTAATGAGTCTTGGAAAGGACTTTCTTGGGGAATGGTACCATTGCTAGGTGGAGCATTTTGTGCTTGCACATGGCATTTTTTCTACAACTC
TGAGTCTCTTGAGGTTTTGGTGGCCATTCAGGCAATGCTAACAGCTATAGGAAATGCCACAATGTGCATTGCTGCATTTCGCATTTACAAATCATCACAAGAACGTTCAA
AGAACTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCACTCACTTCCCCACTCTTGTATTCCTTTTCAATTCCCAAATCCCCACTCCCAATTTCCACAGATTTTGCCCCTACTTTTCAACTTCCTACCGGAGTCTCATTCCG
GCGACCCATCTCCCGTCTGGGTTTTCCCTCCAAAACCATGGTGGTTTTGCTCGGTACGGGTTTCACTCTTGCCCTTTTGGGACCTGAATCCGCTTCTGCTGCCACGGAAT
TGTCATCTTCGCTGCTTTTTAACGAGCCCCAAAATGCTCTCTCCTTGCCCACCTGGGCCATTCATGTTTCCAGCGTTGTTGAATGGATTACAGCAATGGCTTTGGTGTGG
CAATATGGAGAGAAATCTGGTAATGAGTCTTGGAAAGGACTTTCTTGGGGAATGGTACCATTGCTAGGTGGAGCATTTTGTGCTTGCACATGGCATTTTTTCTACAACTC
TGAGTCTCTTGAGGTTTTGGTGGCCATTCAGGCAATGCTAACAGCTATAGGAAATGCCACAATGTGCATTGCTGCATTTCGCATTTACAAATCATCACAAGAACGTTCAA
AGAACTTGTAA
Protein sequenceShow/hide protein sequence
MSLTSPLLYSFSIPKSPLPISTDFAPTFQLPTGVSFRRPISRLGFPSKTMVVLLGTGFTLALLGPESASAATELSSSLLFNEPQNALSLPTWAIHVSSVVEWITAMALVW
QYGEKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSKNL