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CSPI03G03730 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G03730
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionC2H2-type domain-containing protein
Genome locationChr3:3067571..3068281
RNA-Seq ExpressionCSPI03G03730
SyntenyCSPI03G03730
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily
IPR044653 - C2H2-type zinc-finger protein AZF1/2/3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN55980.1 hypothetical protein Csa_011357 [Cucumis sativus]2.4e-12799.15Show/hide
Query:  MDHNGNSLRIKIKIRSTNAAPKVDDNDCKNQFSSTETPMEKGLLFQPSTPVTAAATRRTSLSPIFGVVDCSKFLHSWLLTGRRGRKSTFSPTSSTTTTDT
        MDHNGNSLRIKIKIRSTNAAPKVDDNDCKNQFSSTETPMEKGLLFQPSTPVTAAATRRTS SPIFGVVDCSKFLHSWLLTGRRGRKSTFSPTSSTTTTDT
Subjt:  MDHNGNSLRIKIKIRSTNAAPKVDDNDCKNQFSSTETPMEKGLLFQPSTPVTAAATRRTSLSPIFGVVDCSKFLHSWLLTGRRGRKSTFSPTSSTTTTDT

Query:  VVNVIPSDRLNTKRVKTETHSDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKANKTDAAIKKETASATIGTSFEPKPTMSM
        VVNVIPSDRLN KRVKTETHSDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKANKTDAAIKKETASATIGTSFEPKPTMSM
Subjt:  VVNVIPSDRLNTKRVKTETHSDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKANKTDAAIKKETASATIGTSFEPKPTMSM

Query:  ADSSTDPTDWKRPVLDFDLNKLPPEEASLESCFLHL
        ADSSTDPTDWKRPVLDFDLNKLPPEEASLESCFLHL
Subjt:  ADSSTDPTDWKRPVLDFDLNKLPPEEASLESCFLHL

KGN56002.2 hypothetical protein Csa_011010 [Cucumis sativus]6.3e-1959.48Show/hide
Query:  KRVKTETHSDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKANKT-DAAIKKETASATIGTSFEPKPTMSMADSSTDPTDWK
        KRVK ETHSD+E      KVH  E K NGALEKEYKC++C KVFT  +ALGGHKS H K  KT DA IKKET      T+ EPK      DSSTD T+ K
Subjt:  KRVKTETHSDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKANKT-DAAIKKETASATIGTSFEPKPTMSMADSSTDPTDWK

Query:  RPVLDFDLN-KLPPEE
        R V+DFDLN +LPP++
Subjt:  RPVLDFDLN-KLPPEE

TYK19398.1 TPRXL protein [Cucumis melo var. makuwa]9.2e-7969.6Show/hide
Query:  MDHNGNSLRIKIKIRSTNA-APKVD---DNDCKNQFSS-------TETPMEKGLLFQPSTPVTAAATRRT--SLSPIFGVVDCSKFLHSWLLTGRRGRKS
        MDHNGNSLRIKIKIR+++  A KVD   DNDCK QF S       +ETPM+KGLLFQ STP+  AATR +  S SP   +VDCSKFLHSW LTGRRGRKS
Subjt:  MDHNGNSLRIKIKIRSTNA-APKVD---DNDCKNQFSS-------TETPMEKGLLFQPSTPVTAAATRRT--SLSPIFGVVDCSKFLHSWLLTGRRGRKS

Query:  TFS-PTSSTTTTDTVVNVIPSDRLNTKRVKTETHSDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKANKTDAAIKKETASA
          S  TSSTTTTDTVV+VI SDRLNTKRVKTETHSD+E+S     V  KENKNNG LEK+YKCNMC KVF +PKALGGHKSGH KANKT  AIKKE A+A
Subjt:  TFS-PTSSTTTTDTVVNVIPSDRLNTKRVKTETHSDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKANKTDAAIKKETASA

Query:  TIGTSFEPKPTMSMADSSTDPTDWKRPVLDFDLNKLPPEEASLESCFLHL
        TIGT+ EPK  +S   SSTD TD K  ++DFDLN+LPP+EA LESCFLHL
Subjt:  TIGTSFEPKPTMSMADSSTDPTDWKRPVLDFDLNKLPPEEASLESCFLHL

XP_008449183.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103491133 [Cucumis melo]5.5e-1551.22Show/hide
Query:  LTGRRGRKSTFSPTSSTTTTDTVVNVIPSDRLNTKRVKTETHSDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKANKT-DA
        L GRRGRK T  P     +T T + VI  D+LN KR K ETHSD++             KN G   KEY C+ C KVFTNP+ALGGHKS H K NKT D 
Subjt:  LTGRRGRKSTFSPTSSTTTTDTVVNVIPSDRLNTKRVKTETHSDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKANKT-DA

Query:  AIKKETASATIGTSFEPKPTMSM
         IKKET      T+ EPK TMS+
Subjt:  AIKKETASATIGTSFEPKPTMSM

XP_011652725.1 putative protein TPRXL [Cucumis sativus]6.5e-3249.21Show/hide
Query:  RIKIKIRSTNAAPKVDDND--CK---NQFSSTETPMEKGLLFQPSTPVTAAATRRTSL-SPIFG---VVDCSKFL-HSWLLTGRRGRKST-FSPTSSTTT
        +IK + R+ ++  K DDN   C    +     ET MEKGL  QP T  T  ++  +S  SP      VVDC K L  SW LTGRRGRK T  S TSSTTT
Subjt:  RIKIKIRSTNAAPKVDDND--CK---NQFSSTETPMEKGLLFQPSTPVTAAATRRTSL-SPIFG---VVDCSKFL-HSWLLTGRRGRKST-FSPTSSTTT

Query:  TDTVVNVIPSD-RLNT--------------------KRVKTETHSDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKANKT-
        TD   +VI SD RL+T                    KRVK ETHSD+E      KVH  E K NGALEKEYKC++C KVFT  +ALGGHKS H K  KT 
Subjt:  TDTVVNVIPSD-RLNT--------------------KRVKTETHSDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKANKT-

Query:  DAAIKKETASATIGTSFEPKPTMSMADSSTDPTDWKRPVLDFDLN-KLPPEE
        DA IKKET      T+ EPK      DSSTD T+ KR V+DFDLN +LPP++
Subjt:  DAAIKKETASATIGTSFEPKPTMSMADSSTDPTDWKRPVLDFDLN-KLPPEE

TrEMBL top hitse value%identityAlignment
A0A0A0L1Z9 C2H2-type domain-containing protein1.2e-12799.15Show/hide
Query:  MDHNGNSLRIKIKIRSTNAAPKVDDNDCKNQFSSTETPMEKGLLFQPSTPVTAAATRRTSLSPIFGVVDCSKFLHSWLLTGRRGRKSTFSPTSSTTTTDT
        MDHNGNSLRIKIKIRSTNAAPKVDDNDCKNQFSSTETPMEKGLLFQPSTPVTAAATRRTS SPIFGVVDCSKFLHSWLLTGRRGRKSTFSPTSSTTTTDT
Subjt:  MDHNGNSLRIKIKIRSTNAAPKVDDNDCKNQFSSTETPMEKGLLFQPSTPVTAAATRRTSLSPIFGVVDCSKFLHSWLLTGRRGRKSTFSPTSSTTTTDT

Query:  VVNVIPSDRLNTKRVKTETHSDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKANKTDAAIKKETASATIGTSFEPKPTMSM
        VVNVIPSDRLN KRVKTETHSDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKANKTDAAIKKETASATIGTSFEPKPTMSM
Subjt:  VVNVIPSDRLNTKRVKTETHSDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKANKTDAAIKKETASATIGTSFEPKPTMSM

Query:  ADSSTDPTDWKRPVLDFDLNKLPPEEASLESCFLHL
        ADSSTDPTDWKRPVLDFDLNKLPPEEASLESCFLHL
Subjt:  ADSSTDPTDWKRPVLDFDLNKLPPEEASLESCFLHL

A0A0A0L4M3 C2H2-type domain-containing protein1.1e-3249.61Show/hide
Query:  IKIKIRSTNAAPKVDDNDCKNQFSS--------TETPMEKGLLFQPSTPVTAAATRRTSL-SPIFG---VVDCSKFL-HSWLLTGRRGRKST-FSPTSST
        +KIK R  N    +D ND   Q  S         ET MEKGL  QP T  T  ++  +S  SP      VVDC K L  SW LTGRRGRK T  S TSST
Subjt:  IKIKIRSTNAAPKVDDNDCKNQFSS--------TETPMEKGLLFQPSTPVTAAATRRTSL-SPIFG---VVDCSKFL-HSWLLTGRRGRKST-FSPTSST

Query:  TTTDTVVNVIPSD-RLNT--------------------KRVKTETHSDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKANK
        TTTD   +VI SD RL+T                    KRVK ETHSD+E      KVH  E K NGALEKEYKC++C KVFT  +ALGGHKS H K  K
Subjt:  TTTDTVVNVIPSD-RLNT--------------------KRVKTETHSDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKANK

Query:  T-DAAIKKETASATIGTSFEPKPTMSMADSSTDPTDWKRPVLDFDLN-KLPPEE
        T DA IKKET      T+ EPK      DSSTD T+ KR V+DFDLN +LPP++
Subjt:  T-DAAIKKETASATIGTSFEPKPTMSMADSSTDPTDWKRPVLDFDLN-KLPPEE

A0A1S3BLH2 LOW QUALITY PROTEIN: uncharacterized protein LOC1034911332.7e-1551.22Show/hide
Query:  LTGRRGRKSTFSPTSSTTTTDTVVNVIPSDRLNTKRVKTETHSDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKANKT-DA
        L GRRGRK T  P     +T T + VI  D+LN KR K ETHSD++             KN G   KEY C+ C KVFTNP+ALGGHKS H K NKT D 
Subjt:  LTGRRGRKSTFSPTSSTTTTDTVVNVIPSDRLNTKRVKTETHSDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKANKT-DA

Query:  AIKKETASATIGTSFEPKPTMSM
         IKKET      T+ EPK TMS+
Subjt:  AIKKETASATIGTSFEPKPTMSM

A0A5D3D748 TPRXL protein4.5e-7969.6Show/hide
Query:  MDHNGNSLRIKIKIRSTNA-APKVD---DNDCKNQFSS-------TETPMEKGLLFQPSTPVTAAATRRT--SLSPIFGVVDCSKFLHSWLLTGRRGRKS
        MDHNGNSLRIKIKIR+++  A KVD   DNDCK QF S       +ETPM+KGLLFQ STP+  AATR +  S SP   +VDCSKFLHSW LTGRRGRKS
Subjt:  MDHNGNSLRIKIKIRSTNA-APKVD---DNDCKNQFSS-------TETPMEKGLLFQPSTPVTAAATRRT--SLSPIFGVVDCSKFLHSWLLTGRRGRKS

Query:  TFS-PTSSTTTTDTVVNVIPSDRLNTKRVKTETHSDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKANKTDAAIKKETASA
          S  TSSTTTTDTVV+VI SDRLNTKRVKTETHSD+E+S     V  KENKNNG LEK+YKCNMC KVF +PKALGGHKSGH KANKT  AIKKE A+A
Subjt:  TFS-PTSSTTTTDTVVNVIPSDRLNTKRVKTETHSDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKANKTDAAIKKETASA

Query:  TIGTSFEPKPTMSMADSSTDPTDWKRPVLDFDLNKLPPEEASLESCFLHL
        TIGT+ EPK  +S   SSTD TD K  ++DFDLN+LPP+EA LESCFLHL
Subjt:  TIGTSFEPKPTMSMADSSTDPTDWKRPVLDFDLNKLPPEEASLESCFLHL

A0A5D3D759 TPRXL protein7.0e-0851.61Show/hide
Query:  MEKGLLFQPSTPVTAAATR-----RTSLSPIFG--VVDCSKFLHSWLLTGRRGRKSTFSPTSSTTTTDTVVNVIPSDRLNTKRVKTETHSDYE
        MEKGLL QP    TA ATR      +S SP     VVDC KF+ SW L GRRGRK T  P     +T T + VI  D+LN KR K ETHSD++
Subjt:  MEKGLLFQPSTPVTAAATR-----RTSLSPIFG--VVDCSKFLHSWLLTGRRGRKSTFSPTSSTTTTDTVVNVIPSDRLNTKRVKTETHSDYE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G56200.1 C2H2 type zinc finger transcription factor family4.2e-0536.59Show/hide
Query:  EYKCNMCRKVFTNPKALGGHKSGHNKAN-KTDAAIKKETASATIGTSFEPKPTMSMADSSTDPTDWKRPVLDFDLNKLPPEE
        ++ CN+C K F+  +ALGGHK  H  A   T A     TA+ T+  +     +  + ++  +    KR VL+FDLN+LPP E
Subjt:  EYKCNMCRKVFTNPKALGGHKSGHNKAN-KTDAAIKKETASATIGTSFEPKPTMSMADSSTDPTDWKRPVLDFDLNKLPPEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCACAATGGCAATTCACTCCGGATCAAGATCAAGATCAGAAGCACCAATGCTGCTCCCAAGGTGGACGACAACGATTGCAAGAACCAGTTTTCTTCCACTGAAAC
ACCAATGGAGAAAGGCTTATTGTTCCAACCTTCAACTCCGGTCACTGCAGCTGCCACCCGACGAACCTCTCTCTCTCCCATCTTTGGCGTCGTTGATTGTTCTAAATTTT
TACACTCTTGGCTTCTCACTGGTCGACGAGGGCGGAAGAGCACCTTCTCTCCTACCTCCTCCACTACCACCACCGATACTGTCGTTAATGTTATCCCTAGTGATCGTCTC
AACACAAAAAGAGTGAAGACTGAGACTCATTCTGATTACGAGGAGTCATCGACAATTGGAAAAGTGCACGTTAAAGAAAATAAGAATAATGGGGCTTTGGAGAAGGAATA
TAAATGTAACATGTGCCGCAAAGTATTCACAAATCCAAAAGCATTGGGAGGACATAAGTCTGGCCATAACAAAGCCAATAAAACAGACGCTGCCATTAAAAAGGAAACTG
CAAGTGCTACCATTGGAACGAGCTTTGAACCAAAGCCAACCATGTCGATGGCAGATTCGTCAACTGATCCAACGGATTGGAAGAGACCAGTGCTGGATTTTGATCTCAAC
AAGCTGCCACCGGAGGAAGCCAGTCTTGAATCTTGCTTTTTGCATCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCACAATGGCAATTCACTCCGGATCAAGATCAAGATCAGAAGCACCAATGCTGCTCCCAAGGTGGACGACAACGATTGCAAGAACCAGTTTTCTTCCACTGAAAC
ACCAATGGAGAAAGGCTTATTGTTCCAACCTTCAACTCCGGTCACTGCAGCTGCCACCCGACGAACCTCTCTCTCTCCCATCTTTGGCGTCGTTGATTGTTCTAAATTTT
TACACTCTTGGCTTCTCACTGGTCGACGAGGGCGGAAGAGCACCTTCTCTCCTACCTCCTCCACTACCACCACCGATACTGTCGTTAATGTTATCCCTAGTGATCGTCTC
AACACAAAAAGAGTGAAGACTGAGACTCATTCTGATTACGAGGAGTCATCGACAATTGGAAAAGTGCACGTTAAAGAAAATAAGAATAATGGGGCTTTGGAGAAGGAATA
TAAATGTAACATGTGCCGCAAAGTATTCACAAATCCAAAAGCATTGGGAGGACATAAGTCTGGCCATAACAAAGCCAATAAAACAGACGCTGCCATTAAAAAGGAAACTG
CAAGTGCTACCATTGGAACGAGCTTTGAACCAAAGCCAACCATGTCGATGGCAGATTCGTCAACTGATCCAACGGATTGGAAGAGACCAGTGCTGGATTTTGATCTCAAC
AAGCTGCCACCGGAGGAAGCCAGTCTTGAATCTTGCTTTTTGCATCTTTAA
Protein sequenceShow/hide protein sequence
MDHNGNSLRIKIKIRSTNAAPKVDDNDCKNQFSSTETPMEKGLLFQPSTPVTAAATRRTSLSPIFGVVDCSKFLHSWLLTGRRGRKSTFSPTSSTTTTDTVVNVIPSDRL
NTKRVKTETHSDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKANKTDAAIKKETASATIGTSFEPKPTMSMADSSTDPTDWKRPVLDFDLN
KLPPEEASLESCFLHL