CuGenDBv2

Gene ID	CSPI03G04090
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	vegetative cell wall protein gp1-like
Genome location	Chr3:3367733..3368565
RNA-Seq Expression	CSPI03G04090
Synteny	CSPI03G04090
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0065729.1 extensin-like [Cucumis melo var. makuwa]

8.9e-80

89.58

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Query:  MAKFALFITLLFLFSPFIGPVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENS
        M  FALF T+LF  SPFIG VFA DSPAASPKPPKT HSPSPAHSPVVSPPS ++SPSKSP ASPP++TP ISPALATPPSVAPSKAPAAVPISSPSENS
Subjt:  MAKFALFITLLFLFSPFIGPVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENS

Query:  PLSSPPSPLPFDASPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAWAF
        P+SSPPSPLPFDASPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPT+LAPETAERPGNDASASG+YKIGVEV+LSGLSIWAAWAF
Subjt:  PLSSPPSPLPFDASPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAWAF

XP_011652729.1 extensin [Cucumis sativus]

1.5e-90

99.48

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Query:  MAKFALFITLLFLFSPFIGPVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENS
        MAKFALFITLLFLFSPFIG VFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENS
Subjt:  MAKFALFITLLFLFSPFIGPVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENS

Query:  PLSSPPSPLPFDASPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAWAF
        PLSSPPSPLPFDASPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAWAF
Subjt:  PLSSPPSPLPFDASPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAWAF

XP_022932347.1 gibberellin-regulated protein 14-like [Cucurbita moschata]

4.1e-61

72.28

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Query:  MAKFALFITLLFLFSPFIGPVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSEN-
        M KFALF T+L LFS F   V   DSPAA+PKP KT HSPSPAHSPVVSPP+H+ SP  SP +SPP  TP ISP+LATPP V+P KAPAA P+SSP+ + 
Subjt:  MAKFALFITLLFLFSPFIGPVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSEN-

Query:  -----SPLSSPPSPLPFDAS----PVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAW
             SP+ SPPSPLP DAS    PVGAPVEPEIPANPI+GG+PV TPSIFPSSSSPPM+TP SLAPETAE PG DASASGKY+IG EVILSGLSIWA W
Subjt:  -----SPLSSPPSPLPFDAS----PVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAW

Query:  AF
        AF
Subjt:  AF

XP_023552940.1 gibberellin-regulated protein 14-like [Cucurbita pepo subsp. pepo]

2.1e-60

72.73

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Query:  MAKFALFITLLFLFSPFIGPVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENS
        M KF LF T+L LFS F   VF  DSPAA+PKP KT HSPSPAHSPVVSPP+H+ SP  SP +SPP  TP ISP+LATPP V+P KAPAA P+SSP+ + 
Subjt:  MAKFALFITLLFLFSPFIGPVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENS

Query:  PLS--SPPSPLPFDAS----PVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAWAF
         +S  SPPSPLP DAS    PVGAPVEPEIPANPI+GG+PV TPSIFPSSSSPPM+TP SLAPETAE PG DASASGKY+IG EVILSGLS+WA WAF
Subjt:  PLS--SPPSPLPFDAS----PVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAWAF

XP_038904208.1 calphotin-like [Benincasa hispida]

8.6e-67

78.22

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Query:  MAKFALFITLLFLFSPFIGPVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSP----
        M KFALF T+L LFSPF G VF  DSPAA+PKP KT HSPSPAHSPVVSPPS + SP K P ASPP +TP ISPA ATPPSVAP KAPA+ P+SSP    
Subjt:  MAKFALFITLLFLFSPFIGPVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSP----

Query:  --SENSPLSSPPSPLPFDAS----PVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAW
          SE SP+SSPPSP P DAS    PVG PVEPEIPANPISGG+PVGTPSIFPSSSSPPM+TP SLAPETAERPGNDASASGK KIGVEVILSGLSIWAAW
Subjt:  --SENSPLSSPPSPLPFDAS----PVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAW

Query:  AF
        AF
Subjt:  AF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L269 Lipid binding protein

7.1e-91

99.48

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Query:  MAKFALFITLLFLFSPFIGPVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENS
        MAKFALFITLLFLFSPFIG VFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENS
Subjt:  MAKFALFITLLFLFSPFIGPVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENS

Query:  PLSSPPSPLPFDASPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAWAF
        PLSSPPSPLPFDASPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAWAF
Subjt:  PLSSPPSPLPFDASPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAWAF

A0A5A7VJY8 Extensin-like

4.3e-80

89.58

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Query:  MAKFALFITLLFLFSPFIGPVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENS
        M  FALF T+LF  SPFIG VFA DSPAASPKPPKT HSPSPAHSPVVSPPS ++SPSKSP ASPP++TP ISPALATPPSVAPSKAPAAVPISSPSENS
Subjt:  MAKFALFITLLFLFSPFIGPVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENS

Query:  PLSSPPSPLPFDASPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAWAF
        P+SSPPSPLPFDASPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPT+LAPETAERPGNDASASG+YKIGVEV+LSGLSIWAAWAF
Subjt:  PLSSPPSPLPFDASPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAWAF

A0A6J1DWL9 classical arabinogalactan protein 4-like

9.6e-56

69.42

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Query:  MAKFALFITLLFLFSPFIGPVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSV---APSKAPAAVPISSP-
        M K A ++T+L LF+PF G V A D+PA SPKP KT HSP P HSP VS PSH+ SPSKSPAASPP  TP ISPAL+TPP+    AP+ APA+ P++SP 
Subjt:  MAKFALFITLLFLFSPFIGPVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSV---APSKAPAAVPISSP-

Query:  -SENSPLSSPPSPLPFDASPV--------GAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASAS-GKYKIGVEVILSGLSI
         SE SP+SSPPSP P  ASPV        G+P EPEIPANPI+GGSPV TPSIFPSSSSPPM++P SLAPETAERPGNDASAS  KYKIG EVILSG+SI
Subjt:  -SENSPLSSPPSPLPFDASPV--------GAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASAS-GKYKIGVEVILSGLSI

Query:  WAAWAF
        WAAWAF
Subjt:  WAAWAF

A0A6J1EWE6 gibberellin-regulated protein 14-like

2.0e-61

72.28

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Query:  MAKFALFITLLFLFSPFIGPVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSEN-
        M KFALF T+L LFS F   V   DSPAA+PKP KT HSPSPAHSPVVSPP+H+ SP  SP +SPP  TP ISP+LATPP V+P KAPAA P+SSP+ + 
Subjt:  MAKFALFITLLFLFSPFIGPVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSEN-

Query:  -----SPLSSPPSPLPFDAS----PVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAW
             SP+ SPPSPLP DAS    PVGAPVEPEIPANPI+GG+PV TPSIFPSSSSPPM+TP SLAPETAE PG DASASGKY+IG EVILSGLSIWA W
Subjt:  -----SPLSSPPSPLPFDAS----PVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAW

Query:  AF
        AF
Subjt:  AF

A0A6J1L107 gibberellin-regulated protein 14-like

6.0e-58

69.8

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Query:  MAKFALFITLLFLFSPFIGPVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSEN-
        M  FALF T+L LFS F   V A DS AA+PKP KT +SPSPAHSPV SPPSH+ SP  SP +SPP  TP ISP+L TPP V+P K PAA P+SSP+ + 
Subjt:  MAKFALFITLLFLFSPFIGPVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSEN-

Query:  -----SPLSSPPSPLPFDAS----PVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAW
             SP+ SPPSPLP DAS    PVGAPVEPEIPANPI+GG+PV TPSIFPSSSSPPM+TP SLAPETAE PG DAS SGKY+IG EVILSGLSIWA W
Subjt:  -----SPLSSPPSPLPFDAS----PVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAW

Query:  AF
        AF
Subjt:  AF

SwissProt top hits

e value

%identity

Alignment

Q9SN46 Leucine-rich repeat extensin-like protein 5

1.3e-04

38.71

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Query:  SPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALAT----PPSVAPSKAPAAVPISSPSENSPLSSPPSPLPFDASPVGAPVE
        SP+ SP PP T+ SP    SP  SPPS ++ PS  P+ +P   +P  SP   T    PPS   +  P   P SSP+  +P  SPPS  P   SP G+P  
Subjt:  SPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALAT----PPSVAPSKAPAAVPISSPSENSPLSSPPSPLPFDASPVGAPVE

Query:  PEI-PANPISGGSPVGTPS--------IFPSSSSPPMATPTSLAPETAERPGNDA
        P I P+ PI+  SP  TP+          P+ SSP  + PT   P T   PG ++
Subjt:  PEI-PANPISGGSPVGTPS--------IFPSSSSPPMATPTSLAPETAERPGNDA

Arabidopsis top hits

e value

%identity

Alignment

AT3G22142.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein

2.9e-04

32.32

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Query:  PFIGPVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVT------PVISPALATPP--SVAPSKAPAAVP--ISSPSENSPLSSP
        P   P  +    A  P     + +P PA  PV +PP  T   +K P A+PP  T      PV  P +ATPP  +  P+K P A+P   + P    P+++P
Subjt:  PFIGPVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVT------PVISPALATPP--SVAPSKAPAAVP--ISSPSENSPLSSP

Query:  PSPLPFDASPVGAPVEPEIPANPISGGSPVGTPSI------FPSSSSPPMATPTSLAPETAERP
        P+  P  A+P   P+       P +   PV TP I       P +++PP+A P    P TA+ P
Subjt:  PSPLPFDASPVGAPVEPEIPANPISGGSPVGTPSI------FPSSSSPPMATPTSLAPETAERP

AT4G18670.1 Leucine-rich repeat (LRR) family protein

9.0e-06

38.71

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Query:  SPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALAT----PPSVAPSKAPAAVPISSPSENSPLSSPPSPLPFDASPVGAPVE
        SP+ SP PP T+ SP    SP  SPPS ++ PS  P+ +P   +P  SP   T    PPS   +  P   P SSP+  +P  SPPS  P   SP G+P  
Subjt:  SPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALAT----PPSVAPSKAPAAVPISSPSENSPLSSPPSPLPFDASPVGAPVE

Query:  PEI-PANPISGGSPVGTPS--------IFPSSSSPPMATPTSLAPETAERPGNDA
        P I P+ PI+  SP  TP+          P+ SSP  + PT   P T   PG ++
Subjt:  PEI-PANPISGGSPVGTPS--------IFPSSSSPPMATPTSLAPETAERPGNDA

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCCAAGTTTGCTTTGTTTATTACTCTTCTCTTTTTGTTTTCGCCATTTATTGGCCCCGTTTTCGCTAACGATTCCCCTGCCGCCTCCCCAAAACCTCCTAAAACGCT
TCATTCTCCTTCTCCGGCGCATTCTCCGGTTGTTTCGCCGCCGAGTCACACTGTATCTCCGTCTAAATCTCCGGCTGCTTCTCCACCGGTCGTAACTCCGGTAATTTCTC
CGGCATTGGCTACCCCACCATCTGTAGCGCCCTCGAAGGCTCCGGCAGCGGTACCTATTTCTTCGCCGAGTGAAAATTCTCCGCTTTCGTCGCCGCCGTCTCCTCTCCCT
TTCGATGCTTCTCCGGTTGGGGCTCCAGTGGAACCAGAAATCCCGGCAAATCCGATTTCTGGAGGGTCTCCCGTGGGGACGCCGTCGATATTTCCGTCGAGCAGTAGCCC
ACCGATGGCTACTCCGACAAGCTTAGCACCGGAAACGGCGGAGAGGCCTGGAAACGACGCGTCGGCGTCAGGAAAGTACAAGATCGGGGTGGAGGTTATTTTGAGTGGGC
TTTCTATTTGGGCTGCTTGGGCCTTTTGA

mRNA sequence

Show/hide mRNA sequence

ATTCCGGTCCTATTTTTGACTTCATATTTCGGACCGCCGGTCTAAAACACAGAGAGAAATCCCCCTCCCCCCCCCCAATAGCATGGCCAAGTTTGCTTTGTTTATTACTC
TTCTCTTTTTGTTTTCGCCATTTATTGGCCCCGTTTTCGCTAACGATTCCCCTGCCGCCTCCCCAAAACCTCCTAAAACGCTTCATTCTCCTTCTCCGGCGCATTCTCCG
GTTGTTTCGCCGCCGAGTCACACTGTATCTCCGTCTAAATCTCCGGCTGCTTCTCCACCGGTCGTAACTCCGGTAATTTCTCCGGCATTGGCTACCCCACCATCTGTAGC
GCCCTCGAAGGCTCCGGCAGCGGTACCTATTTCTTCGCCGAGTGAAAATTCTCCGCTTTCGTCGCCGCCGTCTCCTCTCCCTTTCGATGCTTCTCCGGTTGGGGCTCCAG
TGGAACCAGAAATCCCGGCAAATCCGATTTCTGGAGGGTCTCCCGTGGGGACGCCGTCGATATTTCCGTCGAGCAGTAGCCCACCGATGGCTACTCCGACAAGCTTAGCA
CCGGAAACGGCGGAGAGGCCTGGAAACGACGCGTCGGCGTCAGGAAAGTACAAGATCGGGGTGGAGGTTATTTTGAGTGGGCTTTCTATTTGGGCTGCTTGGGCCTTTTG
AAATTAGGCCCATATGTTTAAATTTTGGTGGTAGGTGTTTTGTTTTGAGATTATATTGTATTCTTTTTTGACTCAACGTGTGGGGTTCTTCTTTTTATTCAATTTTCTTA
TATGAATATAATGTTTTTGGTATATTTAGGGTTATTAAATTAATAATAGTTAAACTAAATTGC

Protein sequence

Show/hide protein sequence

MAKFALFITLLFLFSPFIGPVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENSPLSSPPSPLP
FDASPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAWAF

CSPI03G04090 (gene) of Cucumber (PI 183967) v1 genome