; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G04530 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G04530
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionserine/arginine-rich splicing factor RS40-like isoform X1
Genome locationChr3:3683150..3688346
RNA-Seq ExpressionCSPI03G04530
SyntenyCSPI03G04530
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0016607 - nuclear speck (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650115.1 hypothetical protein Csa_009778 [Cucumis sativus]2.3e-20198.92Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTN
        MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGG  GSGGGSRRSSTN
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTN

Query:  TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
        TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
Subjt:  TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR

Query:  SPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP
        SPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP
Subjt:  SPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP

Query:  YRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE
        YRRERERGSPIGGRG S+SPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE
Subjt:  YRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE

XP_008449096.1 PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X1 [Cucumis melo]2.3e-19396.22Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTN
        MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGG  GSGGGSRRSS+N
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTN

Query:  TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
        TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
Subjt:  TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR

Query:  SPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP
        SPSPYRRERGSPDYGNGISRSPYRRQR SPDYGSRRSPSPYQRERERGSPDY RGRSPKHSPYRRERERSSDH RAPS SP HQRERPN DRIPNRSPSP
Subjt:  SPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP

Query:  YRRERERGSPI-GGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE
        YRRERER SPI  GRGTS+SPRDRER NPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE
Subjt:  YRRERERGSPI-GGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE

XP_008449098.1 PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X2 [Cucumis melo]1.6e-19195.95Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTN
        MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGG  GSGGGSRRSS+N
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTN

Query:  TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
        TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
Subjt:  TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR

Query:  SPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP
        SPSPYRRERGSPDYGNGISRSPYRRQR SPDYGSRRSPSPYQRERERGSPDY RGRSPKHSPYRRERERSSDH RAPS SP HQRERPN DRIPNRSPSP
Subjt:  SPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP

Query:  YRRERERGSPI-GGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE
        YRRERER SPI  GRGTS+SPRDRER NPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN SRSPQAEE
Subjt:  YRRERERGSPI-GGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE

XP_011650502.1 serine/arginine-rich splicing factor RS40 isoform X1 [Cucumis sativus]2.3e-20198.92Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTN
        MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGG  GSGGGSRRSSTN
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTN

Query:  TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
        TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
Subjt:  TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR

Query:  SPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP
        SPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP
Subjt:  SPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP

Query:  YRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE
        YRRERERGSPIGGRG S+SPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE
Subjt:  YRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE

XP_011650503.1 serine/arginine-rich splicing factor RS40 isoform X2 [Cucumis sativus]1.6e-19998.64Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTN
        MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGG  GSGGGSRRSSTN
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTN

Query:  TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
        TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
Subjt:  TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR

Query:  SPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP
        SPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP
Subjt:  SPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP

Query:  YRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE
        YRRERERGSPIGGRG S+SPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN SRSPQAEE
Subjt:  YRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE

TrEMBL top hitse value%identityAlignment
A0A0A0L7I3 Uncharacterized protein1.1e-20198.92Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTN
        MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGG  GSGGGSRRSSTN
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTN

Query:  TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
        TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
Subjt:  TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR

Query:  SPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP
        SPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP
Subjt:  SPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP

Query:  YRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE
        YRRERERGSPIGGRG S+SPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE
Subjt:  YRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE

A0A1S3BL99 serine/arginine-rich splicing factor RS40-like isoform X11.1e-19396.22Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTN
        MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGG  GSGGGSRRSS+N
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTN

Query:  TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
        TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
Subjt:  TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR

Query:  SPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP
        SPSPYRRERGSPDYGNGISRSPYRRQR SPDYGSRRSPSPYQRERERGSPDY RGRSPKHSPYRRERERSSDH RAPS SP HQRERPN DRIPNRSPSP
Subjt:  SPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP

Query:  YRRERERGSPI-GGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE
        YRRERER SPI  GRGTS+SPRDRER NPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE
Subjt:  YRRERERGSPI-GGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE

A0A1S3BLX3 serine/arginine-rich splicing factor RS40-like isoform X28.0e-19295.95Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTN
        MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGG  GSGGGSRRSS+N
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTN

Query:  TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
        TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
Subjt:  TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR

Query:  SPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP
        SPSPYRRERGSPDYGNGISRSPYRRQR SPDYGSRRSPSPYQRERERGSPDY RGRSPKHSPYRRERERSSDH RAPS SP HQRERPN DRIPNRSPSP
Subjt:  SPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP

Query:  YRRERERGSPI-GGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE
        YRRERER SPI  GRGTS+SPRDRER NPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN SRSPQAEE
Subjt:  YRRERERGSPI-GGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE

A0A1S4DXA1 serine/arginine-rich splicing factor RS40-like isoform X11.1e-18089.45Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRP----SGGGGGSGSGGGSRR
        MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDER+AEDAI ALDRREFGRKGRRLRVEWTKQERGIRRP     GGGGG G GGGSRR
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRP----SGGGGGSGSGGGSRR

Query:  SSTNTRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPD
        SSTNTRPSKTLFVINFDPYHTR RDLERHFDPYGKIL+VRIRRNFAFVQYELQEDATRALE+TNMSKLMDRVISVEYAVRDDD+KRNGYSPDRNRDRSPD
Subjt:  SSTNTRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPD

Query:  RKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIR-APSHSPPHQRERPNDDRIPN
        RKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDY RGRSP HSPYRRERERSSDH+R APS+ P HQRERPNDDR+PN
Subjt:  RKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIR-APSHSPPHQRERPNDDRIPN

Query:  RSPSPYRRERERGSPIGGRGTSFSPRDRER-LNPDNGHDH----QENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE
        RSPSPY RERE+GSP  GRGTS+SPRDRER  NPDNGHDH    Q+N V EPGE P+Y  TQSPKHRGY SSRSPQAEE
Subjt:  RSPSPYRRERERGSPIGGRGTSFSPRDRER-LNPDNGHDH----QENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE

A0A5A7VJB8 Serine/arginine-rich splicing factor RS40-like isoform X11.1e-18089.45Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRP----SGGGGGSGSGGGSRR
        MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDER+AEDAI ALDRREFGRKGRRLRVEWTKQERGIRRP     GGGGG G GGGSRR
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRP----SGGGGGSGSGGGSRR

Query:  SSTNTRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPD
        SSTNTRPSKTLFVINFDPYHTR RDLERHFDPYGKIL+VRIRRNFAFVQYELQEDATRALE+TNMSKLMDRVISVEYAVRDDD+KRNGYSPDRNRDRSPD
Subjt:  SSTNTRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPD

Query:  RKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIR-APSHSPPHQRERPNDDRIPN
        RKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDY RGRSP HSPYRRERERSSDH+R APS+ P HQRERPNDDR+PN
Subjt:  RKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIR-APSHSPPHQRERPNDDRIPN

Query:  RSPSPYRRERERGSPIGGRGTSFSPRDRER-LNPDNGHDH----QENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE
        RSPSPY RERE+GSP  GRGTS+SPRDRER  NPDNGHDH    Q+N V EPGE P+Y  TQSPKHRGY SSRSPQAEE
Subjt:  RSPSPYRRERERGSPIGGRGTSFSPRDRER-LNPDNGHDH----QENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE

SwissProt top hitse value%identityAlignment
O22315 Serine/arginine-rich-splicing factor SR341.5e-1431.46Show/hide
Query:  KPIFCGNFEYDARQPDLERLFSRYGKVDRVDMK-----SGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPS--------GGGGGS
        + ++ GN   D R+ ++E LFS+YG V ++D+K      G+AF+  +D R+AEDAIH  D  +F   G RLRVE      G RR S        GGG G 
Subjt:  KPIFCGNFEYDARQPDLERLFSRYGKVDRVDMK-----SGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPS--------GGGGGS

Query:  GSGGGSRRSSTNTRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRN----FAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNG
        G G G   S   +R S+   ++   P     +DL+ H    G +   ++ R+       V Y   ED   AL+  + ++  +   +    VR+ D +++ 
Subjt:  GSGGGSRRSSTNTRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRN----FAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNG

Query:  YSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSP-YRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPH
         SP R R  S  R R       R R         SRSP  +  R SP   + RSP P  + R   SP  SR RS    P  ++    S    +P+ SP H
Subjt:  YSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSP-YRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPH

Query:  QR
         R
Subjt:  QR

P92964 Serine/arginine-rich splicing factor RS311.4e-6853.47Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTN
        M+P+F GNFEY+ RQ DLERLF +YG+VDRVDMKSG+AF+Y EDER+AEDAI  LD   FG + RRL VEW K ERG  RP           G  ++ +N
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTN

Query:  TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
         +P+KTLFVINFDP  T+  D+E+HF+PYGK+ NVRIRRNF+FVQ+E QEDAT+ALE T  SK++DRV+SVEYA++DDDE+      DRN  RSP   RR
Subjt:  TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR

Query:  SPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP
        S SP  R R SPDYG     SP + +R SPDYG  RSP   + +R +G   Y R RSP +        RSSD+ R  S         P  DR  +RSP P
Subjt:  SPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP

Query:  YRR
          R
Subjt:  YRR

P92965 Serine/arginine-rich splicing factor RS403.4e-10761.08Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTN
        MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAI ALDR EFGRKGRRLRVEWTK ER        GG   SGGGSRRSS++
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTN

Query:  TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
         RPSKTLFVINFD  +TR RDLE+HF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + NG+SP+R RDRSP+R+RR
Subjt:  TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR

Query:  SPSPYRRERGSPDYGNGISR-SPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPS
        SPSPY+RERGSPDYG G S  + YR++R SPDYG RRSPSPY++ R RGSP+Y R R    SP RRER  S       S SP ++RER + +  P +  S
Subjt:  SPSPYRRERGSPDYGNGISR-SPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPS

Query:  PYRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE
        P     E  SPI         R+R R +P+NG      ++        Y G +SP  +   S RSP A+E
Subjt:  PYRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE

P92966 Serine/arginine-rich splicing factor RS412.4e-10559.95Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTN
        MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAI ALDR E+GR GRRLRVEWTK +R         GG+G  GGSRRSS+ 
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTN

Query:  TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
         RPSKTLFVINFD  +TR RDLERHF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD + NGYSP+R RDRSPDR+RR
Subjt:  TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR

Query:  SPSPYRRERGSPDYGNGISRSPYRRQRASPDYG-SRRSPSPYQRERERGSPDYSRG-------RSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDR
        SPSPYRRERGSPDYG G S   ++R+R SPDYG  RRSPSPY+R R   SPDY R         SP++   R    R     R  S SPP     P + R
Subjt:  SPSPYRRERGSPDYGNGISRSPYRRQRASPDYG-SRRSPSPYQRERERGSPDYSRG-------RSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDR

Query:  IPNRSPSPYRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE
          +RSP PY + RE  SP          R R + +P+NG       + E      Y G  SP     + SRSP AEE
Subjt:  IPNRSPSPYRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE

Q9ZPX8 Serine/arginine-rich splicing factor RS31A1.7e-6153.67Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIR-RPSGGGGGSGSGGGSRRSST
        M+ ++ GNF+YD R  DLERLFS++G+V RVDMKSG+AF+Y EDER+AEDAI   D   FG   R+L VEW K  +G R +P  G           ++ +
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIR-RPSGGGGGSGSGGGSRRSST

Query:  NTRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKR
        N RP+KTLFVINFDP  TR RD+ERHF+PYGK+LNVR+RRNFAFVQ+  QEDAT+AL+ T+ SKL+D+V+SVEYA+R+  E+ + Y+  R R       R
Subjt:  NTRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKR

Query:  RSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSP
        R PSP    R SP+Y      +PY R R SPDYG  R  S Y R R R SP Y R RSP
Subjt:  RSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSP

Arabidopsis top hitse value%identityAlignment
AT4G25500.1 arginine/serine-rich splicing factor 352.4e-10861.08Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTN
        MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAI ALDR EFGRKGRRLRVEWTK ER        GG   SGGGSRRSS++
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTN

Query:  TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
         RPSKTLFVINFD  +TR RDLE+HF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + NG+SP+R RDRSP+R+RR
Subjt:  TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR

Query:  SPSPYRRERGSPDYGNGISR-SPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPS
        SPSPY+RERGSPDYG G S  + YR++R SPDYG RRSPSPY++ R RGSP+Y R R    SP RRER  S       S SP ++RER + +  P +  S
Subjt:  SPSPYRRERGSPDYGNGISR-SPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPS

Query:  PYRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE
        P     E  SPI         R+R R +P+NG      ++        Y G +SP  +   S RSP A+E
Subjt:  PYRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE

AT4G25500.3 arginine/serine-rich splicing factor 353.3e-8959.1Show/hide
Query:  GFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNV
        GFAF+YMEDER+AEDAI ALDR EFGRKGRRLRVEWTK ER        GG   SGGGSRRSS++ RPSKTLFVINFD  +TR RDLE+HF+PYGKI+NV
Subjt:  GFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNV

Query:  RIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISR-SPYRRQRASPDYGS
        RIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + NG+SP+R RDRSP+R+RRSPSPY+RERGSPDYG G S  + YR++R SPDYG 
Subjt:  RIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISR-SPYRRQRASPDYGS

Query:  RRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSPYRRERERGSPIGGRGTSFSPRDRERLNPDNGHDH
        RRSPSPY++ R RGSP+Y R R    SP RRER  S       S SP ++RER + +  P +  SP     E  SPI         R+R R +P+NG   
Subjt:  RRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSPYRRERERGSPIGGRGTSFSPRDRERLNPDNGHDH

Query:  QENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE
           ++        Y G +SP  +   S RSP A+E
Subjt:  QENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE

AT4G25500.4 arginine/serine-rich splicing factor 352.4e-10861.08Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTN
        MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAI ALDR EFGRKGRRLRVEWTK ER        GG   SGGGSRRSS++
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTN

Query:  TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
         RPSKTLFVINFD  +TR RDLE+HF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + NG+SP+R RDRSP+R+RR
Subjt:  TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR

Query:  SPSPYRRERGSPDYGNGISR-SPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPS
        SPSPY+RERGSPDYG G S  + YR++R SPDYG RRSPSPY++ R RGSP+Y R R    SP RRER  S       S SP ++RER + +  P +  S
Subjt:  SPSPYRRERGSPDYGNGISR-SPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPS

Query:  PYRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE
        P     E  SPI         R+R R +P+NG      ++        Y G +SP  +   S RSP A+E
Subjt:  PYRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE

AT5G52040.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.7e-10659.95Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTN
        MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAI ALDR E+GR GRRLRVEWTK +R         GG+G  GGSRRSS+ 
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTN

Query:  TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
         RPSKTLFVINFD  +TR RDLERHF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD + NGYSP+R RDRSPDR+RR
Subjt:  TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR

Query:  SPSPYRRERGSPDYGNGISRSPYRRQRASPDYG-SRRSPSPYQRERERGSPDYSRG-------RSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDR
        SPSPYRRERGSPDYG G S   ++R+R SPDYG  RRSPSPY+R R   SPDY R         SP++   R    R     R  S SPP     P + R
Subjt:  SPSPYRRERGSPDYGNGISRSPYRRQRASPDYG-SRRSPSPYQRERERGSPDYSRG-------RSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDR

Query:  IPNRSPSPYRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE
          +RSP PY + RE  SP          R R + +P+NG       + E      Y G  SP     + SRSP AEE
Subjt:  IPNRSPSPYRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE

AT5G52040.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.0e-10660.21Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTN
        MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAI ALDR E+GR GRRLRVEWTK +R         GG+G  GGSRRSS+ 
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTN

Query:  TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
         RPSKTLFVINFD  +TR RDLERHF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD + NGYSP+R RDRSPDR+RR
Subjt:  TRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR

Query:  SPSPYRRERGSPDYGNGISRSPYRRQRASPDYG-SRRSPSPYQRERERGSPDYSRG-------RSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDR
        SPSPYRRERGSPDYG G S   ++R+R SPDYG  RRSPSPY+R R   SPDY R         SP++   R    R     R  S SPP     P + R
Subjt:  SPSPYRRERGSPDYGNGISRSPYRRQRASPDYG-SRRSPSPYQRERERGSPDYSRG-------RSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDR

Query:  IPNRSPSPYRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE
          +RSP PY + RE  SP          R R + +P+NG       + E      Y G  SP  R  + SRSP AEE
Subjt:  IPNRSPSPYRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCCAATTTTTTGTGGAAACTTCGAGTATGATGCTCGACAGCCTGATCTGGAAAGACTTTTTAGTCGATATGGAAAAGTTGATAGAGTAGATATGAAATCTGGGTT
TGCTTTTATCTACATGGAGGATGAGAGAGAGGCTGAGGATGCTATCCATGCACTCGATCGGAGAGAATTTGGCCGAAAGGGCCGCAGACTACGTGTTGAGTGGACCAAAC
AAGAGCGTGGCATTAGAAGACCTAGTGGAGGTGGAGGTGGAAGTGGAAGTGGAGGCGGTTCGAGGAGATCCTCTACTAACACAAGACCTTCAAAAACTTTATTTGTCATT
AACTTTGATCCATATCATACAAGGATAAGAGATTTGGAGAGGCACTTCGATCCGTATGGTAAGATATTGAATGTCAGGATTCGAAGGAATTTTGCATTTGTCCAGTATGA
ACTGCAGGAGGATGCCACTAGAGCATTGGAGGTTACAAACATGAGCAAATTGATGGATCGAGTGATTTCTGTGGAATATGCTGTTCGGGATGATGATGAGAAAAGAAATG
GATATAGTCCAGATAGGAATCGTGATAGGTCTCCTGATAGAAAACGACGATCCCCAAGTCCTTATAGAAGGGAGCGAGGAAGCCCCGATTATGGCAATGGTATTAGCCGC
AGTCCATATAGGAGGCAAAGGGCTAGTCCTGATTATGGAAGTCGCCGTAGTCCGAGTCCTTATCAGAGAGAGAGGGAGAGAGGATCTCCCGATTATAGCCGTGGTCGTAG
TCCCAAGCATAGTCCTTATAGGAGGGAGAGAGAGAGATCAAGTGACCATATTAGGGCTCCCAGCCACAGTCCTCCCCATCAGAGGGAAAGACCAAATGATGACCGAATCC
CCAACCGAAGTCCTAGTCCCTACAGGAGAGAGAGGGAGAGGGGGAGTCCTATTGGTGGACGTGGCACAAGCTTTAGTCCTCGTGATAGAGAAAGGTTGAACCCGGACAAC
GGTCATGATCACCAGGAGAATACAGTAGCTGAACCTGGTGAGTGCCCCAGTTATAGTGGCACTCAGAGCCCAAAGCATCGGGGTTATAACAGCAGCCGTTCACCACAAGC
AGAGGAATGA
mRNA sequenceShow/hide mRNA sequence
GGTGTACTAAAAATACAAACAATAATAGGAAAAAATAAAATAATCACAAATCATATTTTTTATAAATTAAAATTAAGGATTAAAAAAAAAAGAATTAAGAAAAAAGAGAC
TACAAGCAACCCAGCGGTTCGCACTTGTCTCTTTCTCTTGCAATTCTCATTTCTCTCCGGCAGCGGCTACTACGACGGCGACGCGGCTTCTCTCGGGTCACGACCAGGTG
ACGGCGCAACCCACCTCAGATCTACAATACAACCCACCTCCAGCGTTTGATCGCCTACGCAACAACGTATCTCCGCCACACTCGGATCTGCAACGGCCTCACCTCGGGTC
GCTGGATCTGGCTACACACACATCTCGACGGGTCCGATCTACGGTGGAAAGTCATTCGGACGACGATCGAGACTCGCGGTAAGTAACTCAGTGTCTCAGTTCTCCTTCGG
TTACGATTTCGCAAGATCCAAGTCGGCAGCGACGGTTTCAGGAACTCGAACAATTAGCAATTGAAGCACATTAAGGAGGAACATAGTAGTATGAAGCCAATTTTTTGTGG
AAACTTCGAGTATGATGCTCGACAGCCTGATCTGGAAAGACTTTTTAGTCGATATGGAAAAGTTGATAGAGTAGATATGAAATCTGGGTTTGCTTTTATCTACATGGAGG
ATGAGAGAGAGGCTGAGGATGCTATCCATGCACTCGATCGGAGAGAATTTGGCCGAAAGGGCCGCAGACTACGTGTTGAGTGGACCAAACAAGAGCGTGGCATTAGAAGA
CCTAGTGGAGGTGGAGGTGGAAGTGGAAGTGGAGGCGGTTCGAGGAGATCCTCTACTAACACAAGACCTTCAAAAACTTTATTTGTCATTAACTTTGATCCATATCATAC
AAGGATAAGAGATTTGGAGAGGCACTTCGATCCGTATGGTAAGATATTGAATGTCAGGATTCGAAGGAATTTTGCATTTGTCCAGTATGAACTGCAGGAGGATGCCACTA
GAGCATTGGAGGTTACAAACATGAGCAAATTGATGGATCGAGTGATTTCTGTGGAATATGCTGTTCGGGATGATGATGAGAAAAGAAATGGATATAGTCCAGATAGGAAT
CGTGATAGGTCTCCTGATAGAAAACGACGATCCCCAAGTCCTTATAGAAGGGAGCGAGGAAGCCCCGATTATGGCAATGGTATTAGCCGCAGTCCATATAGGAGGCAAAG
GGCTAGTCCTGATTATGGAAGTCGCCGTAGTCCGAGTCCTTATCAGAGAGAGAGGGAGAGAGGATCTCCCGATTATAGCCGTGGTCGTAGTCCCAAGCATAGTCCTTATA
GGAGGGAGAGAGAGAGATCAAGTGACCATATTAGGGCTCCCAGCCACAGTCCTCCCCATCAGAGGGAAAGACCAAATGATGACCGAATCCCCAACCGAAGTCCTAGTCCC
TACAGGAGAGAGAGGGAGAGGGGGAGTCCTATTGGTGGACGTGGCACAAGCTTTAGTCCTCGTGATAGAGAAAGGTTGAACCCGGACAACGGTCATGATCACCAGGAGAA
TACAGTAGCTGAACCTGGTGAGTGCCCCAGTTATAGTGGCACTCAGAGCCCAAAGCATCGGGGTTATAACAGCAGCCGTTCACCACAAGCAGAGGAATGATGAACTAGAA
GGTGGGAAGTGATGTTGATGATCTCAATCTGCTTCAGAGTATGTTTAGTTGTATAACCAGCATTAGTGGTAAACACATGTACTTGCAAGGATAAAGTTTTGTGATTTCTT
TACATTTGTGCTTCTGCAGTTTGTAGCGATTCTATGGATATGGTGTTACCAGATTTTAGTTAACAATCAAAATACATAGCACTCTGATCTTAGCTAAGAGTGAGTGACTG
TTGCTTTTGGCAGTTTAAAAGCACTGTTTTGGGTTATATCATTATCAACAATGCTTCTAAAATCCTGATAGTGCTTTTGATATTTTTAAATGTATTTTTATGCCATC
Protein sequenceShow/hide protein sequence
MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVI
NFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISR
SPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSPYRRERERGSPIGGRGTSFSPRDRERLNPDN
GHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE