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CSPI03G04630 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G04630
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionGlycine-rich cell wall structural protein-like
Genome locationChr3:3762907..3763503
RNA-Seq ExpressionCSPI03G04630
SyntenyCSPI03G04630
Gene Ontology termsGO:0006099 - tricarboxylic acid cycle (biological process)
GO:0033512 - L-lysine catabolic process to acetyl-CoA via saccharopine (biological process)
GO:0045252 - oxoglutarate dehydrogenase complex (cellular component)
GO:0004149 - dihydrolipoyllysine-residue succinyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065824.1 glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa]3.1e-2274.36Show/hide
Query:  MASKIVFLVFLGAFLFTTSGARKLSTASFQDEKFFHRPRFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGGGAGG---------------
        MASKIVFLVFLGAFLF+TSGARKLSTASFQDEKFFHRPRFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGGGAGG               
Subjt:  MASKIVFLVFLGAFLFTTSGARKLSTASFQDEKFFHRPRFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGGGAGG---------------

Query:  -----------------------GGGGGFGGGGGGGLGGGAGGGFGGGAGAGGGFP
                               GGGGGFGGGGGGGLGGGAGGGFGGGAGAGGG+P
Subjt:  -----------------------GGGGGFGGGGGGGLGGGAGGGFGGGAGAGGGFP

KAA0065825.1 glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa]3.6e-2392.5Show/hide
Query:  MASKIVFLVFLGAFLFTTSGARKLSTASFQDEKFFHRPRFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGGGAGGGGGGGFGGGGGGGLG
        MASKIVFLVFLGAFLFTTSGARKLSTASFQDEKFFHRPR+GGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGGGAGGGGGGGFGGGGGGGLG
Subjt:  MASKIVFLVFLGAFLFTTSGARKLSTASFQDEKFFHRPRFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGGGAGGGGGGGFGGGGGGGLG

Query:  GGA----GGGFGGGAGAGGG
        GG+    G GFGGG+G GGG
Subjt:  GGA----GGGFGGGAGAGGG

OWM85792.1 hypothetical protein CDL15_Pgr012042 [Punica granatum]1.1e-0670.16Show/hide
Query:  ASKIVFLVFLGAFLFTTSGARKL------STASFQDEK-FFHRPRFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGGGA--GGGGGGGFG
        +SK++FLV LGA + +   +R L       +ASF++EK F+H P+FGGGGLGGGGGGGFGGGG GGLGGGS  GFGGG+G GGG+GGG   GGGGGGGFG
Subjt:  ASKIVFLVFLGAFLFTTSGARKL------STASFQDEK-FFHRPRFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGGGA--GGGGGGGFG

Query:  GGGGGGLGGGAGGGFGGGAGAGGG
        GGGGGG+GGGAGGGFGGGAGAGGG
Subjt:  GGGGGGLGGGAGGGFGGGAGAGGG

XP_011650511.1 glycine-rich cell wall structural protein-like [Cucumis sativus]4.7e-2394.83Show/hide
Query:  MASKIVFLVFLGAFLFTTSGARKLSTASFQDEKFFHRPRFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGGGAGGGGGGGFGGGGGGGLG
        MASKIVFLVFLGAFLF+TSGARKLSTASFQDEKFF RPRFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGGGAGGGGGGGFGGGGGGGLG
Subjt:  MASKIVFLVFLGAFLFTTSGARKLSTASFQDEKFFHRPRFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGGGAGGGGGGGFGGGGGGGLG

Query:  GGAGGGFGGGAGAGGG
        GG+  GFGGGAG GGG
Subjt:  GGAGGGFGGGAGAGGG

XP_022151305.1 glycine-rich protein 5 [Momordica charantia]4.9e-1278.51Show/hide
Query:  MASKIVFLVFLGAFLFTTSGARKLSTASFQDEKFFHRPRFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGGGAGGGGGGGFGG-----GG
        MASKI+FLV L AFL TTS ARKL+T SF D+KFFHRP FG    GGGGGGGFGGGGGGGL    GGGFGGGSGFGGG GGGAGGG GGGFGG     GG
Subjt:  MASKIVFLVFLGAFLFTTSGARKLSTASFQDEKFFHRPRFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGGGAGGGGGGGFGG-----GG

Query:  GGGLGGGAGGGFGGGAGAGGG
        GGG+GGGAGGGFGGGAGAGGG
Subjt:  GGGLGGGAGGGFGGGAGAGGG

TrEMBL top hitse value%identityAlignment
A0A0A0L2A7 Uncharacterized protein1.1e-2598.25Show/hide
Query:  MASKIVFLVFLGAFLFTTSGARKLSTASFQDEKFFHRPRFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGGGAGGGGGGGFGGGGGGGLG
        MASKIVFLVFLGAFLF+TSGARKLSTASFQDEKFF RPRFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGGGAGGGGGGGFGGGGGGGLG
Subjt:  MASKIVFLVFLGAFLFTTSGARKLSTASFQDEKFFHRPRFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGGGAGGGGGGGFGGGGGGGLG

Query:  GGAGGGFGGGAGAG
        GGAGGGFGGGAGAG
Subjt:  GGAGGGFGGGAGAG

A0A5A7VJD1 Glycine-rich cell wall structural protein-like1.7e-2392.5Show/hide
Query:  MASKIVFLVFLGAFLFTTSGARKLSTASFQDEKFFHRPRFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGGGAGGGGGGGFGGGGGGGLG
        MASKIVFLVFLGAFLFTTSGARKLSTASFQDEKFFHRPR+GGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGGGAGGGGGGGFGGGGGGGLG
Subjt:  MASKIVFLVFLGAFLFTTSGARKLSTASFQDEKFFHRPRFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGGGAGGGGGGGFGGGGGGGLG

Query:  GGA----GGGFGGGAGAGGG
        GG+    G GFGGG+G GGG
Subjt:  GGA----GGGFGGGAGAGGG

A0A5D3BB90 Glycine-rich cell wall structural protein-like1.5e-2274.36Show/hide
Query:  MASKIVFLVFLGAFLFTTSGARKLSTASFQDEKFFHRPRFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGGGAGG---------------
        MASKIVFLVFLGAFLF+TSGARKLSTASFQDEKFFHRPRFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGGGAGG               
Subjt:  MASKIVFLVFLGAFLFTTSGARKLSTASFQDEKFFHRPRFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGGGAGG---------------

Query:  -----------------------GGGGGFGGGGGGGLGGGAGGGFGGGAGAGGGFP
                               GGGGGFGGGGGGGLGGGAGGGFGGGAGAGGG+P
Subjt:  -----------------------GGGGGFGGGGGGGLGGGAGGGFGGGAGAGGGFP

A0A6J1DAT8 glycine-rich protein 52.4e-1278.51Show/hide
Query:  MASKIVFLVFLGAFLFTTSGARKLSTASFQDEKFFHRPRFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGGGAGGGGGGGFGG-----GG
        MASKI+FLV L AFL TTS ARKL+T SF D+KFFHRP FG    GGGGGGGFGGGGGGGL    GGGFGGGSGFGGG GGGAGGG GGGFGG     GG
Subjt:  MASKIVFLVFLGAFLFTTSGARKLSTASFQDEKFFHRPRFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGGGAGGGGGGGFGG-----GG

Query:  GGGLGGGAGGGFGGGAGAGGG
        GGG+GGGAGGGFGGGAGAGGG
Subjt:  GGGLGGGAGGGFGGGAGAGGG

A0A6P8EH97 glycine-rich protein 5-like5.1e-0770.16Show/hide
Query:  ASKIVFLVFLGAFLFTTSGARKL------STASFQDEK-FFHRPRFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGGGA--GGGGGGGFG
        +SK++FLV LGA + +   +R L       +ASF++EK F+H P+FGGGGLGGGGGGGFGGGG GGLGGGS  GFGGG+G GGG+GGG   GGGGGGGFG
Subjt:  ASKIVFLVFLGAFLFTTSGARKL------STASFQDEK-FFHRPRFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGGGA--GGGGGGGFG

Query:  GGGGGGLGGGAGGGFGGGAGAGGG
        GGGGGG+GGGAGGGFGGGAGAGGG
Subjt:  GGGGGGLGGGAGGGFGGGAGAGGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAAGATTGTCTTTCTTGTGTTTCTTGGTGCTTTTCTCTTCACCACTTCTGGGGCTCGAAAGTTGAGTACTGCCTCTTTTCAAGATGAGAAGTTCTTTCATCG
TCCCAGATTTGGAGGTGGCGGATTGGGTGGAGGAGGTGGTGGAGGATTCGGTGGAGGTGGAGGCGGAGGGTTAGGTGGTGGTTCGGGAGGTGGTTTTGGTGGAGGATCTG
GATTCGGTGGCGGTGTTGGTGGTGGAGCTGGTGGTGGTGGTGGAGGAGGGTTTGGTGGGGGAGGTGGAGGTGGACTTGGTGGTGGAGCAGGCGGAGGATTCGGTGGTGGG
GCCGGTGCAGGAGGTGGATTCCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCAAGATTGTCTTTCTTGTGTTTCTTGGTGCTTTTCTCTTCACCACTTCTGGGGCTCGAAAGTTGAGTACTGCCTCTTTTCAAGATGAGAAGTTCTTTCATCG
TCCCAGATTTGGAGGTGGCGGATTGGGTGGAGGAGGTGGTGGAGGATTCGGTGGAGGTGGAGGCGGAGGGTTAGGTGGTGGTTCGGGAGGTGGTTTTGGTGGAGGATCTG
GATTCGGTGGCGGTGTTGGTGGTGGAGCTGGTGGTGGTGGTGGAGGAGGGTTTGGTGGGGGAGGTGGAGGTGGACTTGGTGGTGGAGCAGGCGGAGGATTCGGTGGTGGG
GCCGGTGCAGGAGGTGGATTCCCTTGAAGGATCTAATGCTTTTACTATCAAATTAGAGCAGAGAAAAAAAAAAGTGTCTTTAAGAAACCCCATCTCATATTATAGTTTTT
CGTATATTATAGTTTTTGCATGTGCAATAATGTGTTTGGTGTTTGTTGTATTAAAATTAGAATTAGGTTCATATGTGAAAAAGCTCTCTCTTTTAGCTCACAATTTCTTA
TATGCCTAATTGTAATTTCCAAGAAGATAAAATATTTTTAAAAAATT
Protein sequenceShow/hide protein sequence
MASKIVFLVFLGAFLFTTSGARKLSTASFQDEKFFHRPRFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGGGAGGGGGGGFGGGGGGGLGGGAGGGFGGG
AGAGGGFP