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CSPI03G04800 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G04800
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionzf-CCHC_4 domain-containing protein
Genome locationChr3:3913876..3914370
RNA-Seq ExpressionCSPI03G04800
SyntenyCSPI03G04800
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBA0600360.1 hypothetical protein [Gossypium raimondii]3.1e-0444.78Show/hide
Query:  VEIVIDIKKLILRVIRLNVNVDGLKWVCLIPMKSERLSKFCWHCGIIGHNLEECSGKVNDEEVGKTF
        +++ IDI+K + RV+R  V+ DG + + LI  K ERL  FC+ CGIIGH L+ C+ KV++EE+   +
Subjt:  VEIVIDIKKLILRVIRLNVNVDGLKWVCLIPMKSERLSKFCWHCGIIGHNLEECSGKVNDEEVGKTF
MBA0725626.1 hypothetical protein [Gossypium laxum]7.0e-0444.78Show/hide
Query:  VEIVIDIKKLILRVIRLNVNVDGLKWVCLIPMKSERLSKFCWHCGIIGHNLEECSGKVNDEEVGKTF
        +++ IDI+K + RV+R  V+ DG + + LI  K ERL  FC+ CGIIGH L+ C  KV++EE+   +
Subjt:  VEIVIDIKKLILRVIRLNVNVDGLKWVCLIPMKSERLSKFCWHCGIIGHNLEECSGKVNDEEVGKTF
PPD66832.1 hypothetical protein GOBAR_DD36291 [Gossypium barbadense]7.0e-0444.78Show/hide
Query:  VEIVIDIKKLILRVIRLNVNVDGLKWVCLIPMKSERLSKFCWHCGIIGHNLEECSGKVNDEEVGKTF
        +++ IDI+K + RV+R  V+ DG + + LI  K ERL  FC+ CGIIGH L+ C  KV++EE+   +
Subjt:  VEIVIDIKKLILRVIRLNVNVDGLKWVCLIPMKSERLSKFCWHCGIIGHNLEECSGKVNDEEVGKTF
TrEMBL top hitse value%identityAlignment
A0A7J8QGH1 Uncharacterized protein (Fragment)1.5e-0444.78Show/hide
Query:  VEIVIDIKKLILRVIRLNVNVDGLKWVCLIPMKSERLSKFCWHCGIIGHNLEECSGKVNDEEVGKTF
        +++ IDI+K + RV+R  V+ DG + + LI  K ERL  FC+ CGIIGH L+ C+ KV++EE+   +
Subjt:  VEIVIDIKKLILRVIRLNVNVDGLKWVCLIPMKSERLSKFCWHCGIIGHNLEECSGKVNDEEVGKTF
A0A7J9ANF7 zf-CCHC_4 domain-containing protein (Fragment)3.4e-0444.78Show/hide
Query:  VEIVIDIKKLILRVIRLNVNVDGLKWVCLIPMKSERLSKFCWHCGIIGHNLEECSGKVNDEEVGKTF
        +++ IDI+K + RV+R  V+ DG + + LI  K ERL  FC+ CGIIGH L+ C  KV++EE+   +
Subjt:  VEIVIDIKKLILRVIRLNVNVDGLKWVCLIPMKSERLSKFCWHCGIIGHNLEECSGKVNDEEVGKTF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGATTGTGGAAATTGTCATTGATATTAAGAAACTGATACTTCGAGTTATCAGACTCAACGTCAACGTAGATGGTTTGAAATGGGTGTGTTTGATACCGATGAAGTC
TGAACGGTTGTCAAAGTTCTGTTGGCATTGTGGAATCATTGGGCATAATCTCGAGGAATGTAGTGGAAAAGTGAACGATGAAGAAGTTGGGAAAACTTTTTATAGGAAAA
AGAGTTGA
mRNA sequenceShow/hide mRNA sequence
GTTTAAGCTTTTGGATCAATTGATAGTTTAAGAAAGATGTTGATTGTGGAAATTGTCATTGATATTAAGAAACTGATACTTCGAGTTATCAGACTCAACGTCAACGTAGA
TGGTTTGAAATGGGTGTGTTTGATACCGATGAAGTCTGAACGGTTGTCAAAGTTCTGTTGGCATTGTGGAATCATTGGGCATAATCTCGAGGAATGTAGTGGAAAAGTGA
ACGATGAAGAAGTTGGGAAAACTTTTTATAGGAAAAAGAGTTGAGTTTTATTGATTATTGCAATAAATTTTCATTTGATACAAATCATGAAGGCTTCAAAGATGATTTAG
GAAACGAAGGCAATGAGAGGATGAAATAAGACTAATGAAGATTCTATTTTGAATAAAGGGAATATGATGACTCACTTTTTAAGTTTGTGAAGTTACGATTTCTTGTTCGT
GTTGGAATGTTCGAGGATTGGGGATTTTTTTATATTTTGTCTTGTGATGTAGGTG
Protein sequenceShow/hide protein sequence
MLIVEIVIDIKKLILRVIRLNVNVDGLKWVCLIPMKSERLSKFCWHCGIIGHNLEECSGKVNDEEVGKTFYRKKS