; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G04850 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G04850
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTF-B3 domain-containing protein
Genome locationChr3:3948850..3949527
RNA-Seq ExpressionCSPI03G04850
SyntenyCSPI03G04850
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003340 - B3 DNA binding domain
IPR005508 - B3 domain-containing protein At2g31720-like
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043114.1 putative B3 domain-containing protein [Cucumis melo var. makuwa]1.3e-7771.3Show/hide
Query:  MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSL-------VNEQSPVVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVG
        MV V Y YNNKIV ++VY+A L L +M   KS EPFEEP    N   SSTS S+       VNEQ P+VNEHAPVVNE L NN  +N NNENV AAVV  
Subjt:  MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSL-------VNEQSPVVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVG

Query:  RDQGRFPPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKT
        RD GR PPMAVIQNIIGECSPPFVKQLTKTDVTD+QGRLALHKEFVN NL PMFN DE L +GISV VYD EGREYDM F+LW SKLYVLTKSWK+FY  
Subjt:  RDQGRFPPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKT

Query:  NDLTQPGEFISVWMFRHVVTQKLCFAIMRG
        N LT+P EFI++WMFRHVV  KLCFAIMRG
Subjt:  NDLTQPGEFISVWMFRHVVTQKLCFAIMRG

KAG6589940.1 putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]2.6e-4649.12Show/hide
Query:  MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLS-STSTSLVNE-QSPVVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGR
        MV VHY +NN+I+ +DVY+ + I + +      E F EP    + Q+S STS  + +E ++P +N    V  EV             V A VV+      
Subjt:  MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLS-STSTSLVNE-QSPVVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGR

Query:  FPPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQ
         P +AVI NIIG  SPP+ K+LTK+DV++ QGRL + KEFV  +L PMFN DED  +GI V VY+ EGR+YDM FKLWASKLYVLTK W +FYKTN+LT 
Subjt:  FPPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQ

Query:  PGEFISVWMFRHVVTQKLCFAIMRGQ
        PG ++++WMFRHV T K+CFA+  GQ
Subjt:  PGEFISVWMFRHVVTQKLCFAIMRGQ

KAG7023605.1 putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]8.0e-4064Show/hide
Query:  PPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQP
        P +AVI NIIG  SPP+ K+LTK+DV++ QGRL + KEFV  +L PMFN DED  +GI V VY+ EGR+YDM FKLWASKLYVLTK W +FYKTN+LT+P
Subjt:  PPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQP

Query:  GEFISVWMFRHVVTQKLCFAIMRGQ
        G ++++WMFRHV T K+CFA+  GQ
Subjt:  GEFISVWMFRHVVTQKLCFAIMRGQ

KGN56101.1 hypothetical protein Csa_010492 [Cucumis sativus]2.4e-124100Show/hide
Query:  MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSLVNEQSPVVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFP
        MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSLVNEQSPVVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFP
Subjt:  MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSLVNEQSPVVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFP

Query:  PMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPG
        PMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPG
Subjt:  PMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPG

Query:  EFISVWMFRHVVTQKLCFAIMRGQA
        EFISVWMFRHVVTQKLCFAIMRGQA
Subjt:  EFISVWMFRHVVTQKLCFAIMRGQA

XP_031736688.1 uncharacterized protein LOC116402065 [Cucumis sativus]1.1e-8170.8Show/hide
Query:  MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQL-SSTSTSLVNEQSPVVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRF
        MV V YTYNNKIV + VY+ASL L  M  S+ ++PFE+P+ R NN+  SSTS S++N+Q P++ E AP+VNE LPNN     NNENVA A V GRD GR 
Subjt:  MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQL-SSTSTSLVNEQSPVVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRF

Query:  PPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQP
        PPMAVIQNIIGECSPPFVKQL KTDVT++QGRLALHKEFV  NL PMFN  E+L++GISV VYD EGREYDMIFK W SKLYVLTKSW +FYK+N+LT+P
Subjt:  PPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQP

Query:  GEFISVWMFRHVVTQKLCFAIMRGQA
        GEFISVWMFRHVV +KLCFAIMRG A
Subjt:  GEFISVWMFRHVVTQKLCFAIMRGQA

TrEMBL top hitse value%identityAlignment
A0A0A0L7L0 TF-B3 domain-containing protein1.1e-124100Show/hide
Query:  MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSLVNEQSPVVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFP
        MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSLVNEQSPVVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFP
Subjt:  MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSLVNEQSPVVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFP

Query:  PMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPG
        PMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPG
Subjt:  PMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPG

Query:  EFISVWMFRHVVTQKLCFAIMRGQA
        EFISVWMFRHVVTQKLCFAIMRGQA
Subjt:  EFISVWMFRHVVTQKLCFAIMRGQA

A0A0A0LC65 TF-B3 domain-containing protein5.8e-5281.45Show/hide
Query:  MAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPGE
        MAVIQNIIGECSPPFVKQL KTDVT++QGRLALHKEFV  NL PMFN  E+L++GISV VYD EGREYDMIFK W SKLYVLTKSW +FYK+N+LT+PGE
Subjt:  MAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPGE

Query:  FISVWMFRHVVTQKLCFAIMRGQA
        FISVWMFRHVV +KLCFAIMRG A
Subjt:  FISVWMFRHVVTQKLCFAIMRGQA

A0A5D3BAS8 Putative B3 domain-containing protein6.1e-7871.3Show/hide
Query:  MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSL-------VNEQSPVVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVG
        MV V Y YNNKIV ++VY+A L L +M   KS EPFEEP    N   SSTS S+       VNEQ P+VNEHAPVVNE L NN  +N NNENV AAVV  
Subjt:  MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSL-------VNEQSPVVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVG

Query:  RDQGRFPPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKT
        RD GR PPMAVIQNIIGECSPPFVKQLTKTDVTD+QGRLALHKEFVN NL PMFN DE L +GISV VYD EGREYDM F+LW SKLYVLTKSWK+FY  
Subjt:  RDQGRFPPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKT

Query:  NDLTQPGEFISVWMFRHVVTQKLCFAIMRG
        N LT+P EFI++WMFRHVV  KLCFAIMRG
Subjt:  NDLTQPGEFISVWMFRHVVTQKLCFAIMRG

A0A6J1CTE7 putative B3 domain-containing protein At4g031707.9e-3339Show/hide
Query:  NNKIVAEDVYKASLILYDMALS------------------KSVEPFEEPIDR---FNNQLSSTSTSLVNEQSPVVNEHAPVVNEVLPNNDDDNGNNENVA
        N K    +VY+A++ LY M+ S                  + V  F++P  +    N+ + + +   V+E+    +     VN+  P  D  N NN+   
Subjt:  NNKIVAEDVYKASLILYDMALS------------------KSVEPFEEPIDR---FNNQLSSTSTSLVNEQSPVVNEHAPVVNEVLPNNDDDNGNNENVA

Query:  AAVVVGRDQGRFPPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFN---DDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLT
             G ++   PP+  I+++IG+CS  + K+LT +DV + QGRLA+ KEFV   L PMFN   ++E+L +GI V VY+ EGRE+ M FK+WASKLYVL 
Subjt:  AAVVVGRDQGRFPPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFN---DDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLT

Query:  KSWKEFYKTNDLT--QPGEFISVWMFRHVVTQKLCFAIMRG
        K WK F K N+LT    GEF+++WMFRH  T  LCFAI+ G
Subjt:  KSWKEFYKTNDLT--QPGEFISVWMFRHVVTQKLCFAIMRG

A0A6P5WRG4 uncharacterized protein LOC111276629 isoform X32.0e-2850Show/hide
Query:  PPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTK-SWKEFYKTNDLTQ
        PP+A +  +IG+CS PF K+LT+TD+TD Q RL+L+K+ V   + P+  +DED+ +GI VI YDIEG+EY+M F  W+ K+YVLT   WK FY+ + L +
Subjt:  PPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTK-SWKEFYKTNDLTQ

Query:  PGEFISVWMFRHVVTQKLCFAI
          + ++VWMFRH +TQ +CF I
Subjt:  PGEFISVWMFRHVVTQKLCFAI

SwissProt top hitse value%identityAlignment
Q9LM90 B3 domain-containing protein At1g206002.2e-0836.56Show/hide
Query:  SPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLW-ASKLYVLTKSWKEFYKTNDLTQPGEFIS
        S P  KQL  +DV  +Q RL L KE V   + P   + ED   G+ V VY  +G    M FK+W   K  VLT  W +F     L +  +F++
Subjt:  SPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLW-ASKLYVLTKSWKEFYKTNDLTQPGEFIS

Q9ZR14 Putative B3 domain-containing protein At4g031702.0e-1744.04Show/hide
Query:  SPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLW-ASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHV
        S P  KQL  +DV  +Q  L L KE V   + P   D E+   GI V VY  +G+   M FK+W   K  VLT  WK+F +   L+   +F++VWMFRH+
Subjt:  SPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLW-ASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHV

Query:  VTQKLCFAI
         T+KLCFAI
Subjt:  VTQKLCFAI

Q9ZR15 Putative B3 domain-containing protein At4g031603.2e-1539.81Show/hide
Query:  KQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLC
        +QL  +DV DNQ RL L KE V   +D +   ++    G++V VY   G  + M+ K+W     VLT  WK F K+  L +  +F+++WMFRH  T+++C
Subjt:  KQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLC

Query:  FAI
        FAI
Subjt:  FAI

Arabidopsis top hitse value%identityAlignment
AT1G20600.1 AP2/B3-like transcriptional factor family protein1.6e-0936.56Show/hide
Query:  SPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLW-ASKLYVLTKSWKEFYKTNDLTQPGEFIS
        S P  KQL  +DV  +Q RL L KE V   + P   + ED   G+ V VY  +G    M FK+W   K  VLT  W +F     L +  +F++
Subjt:  SPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLW-ASKLYVLTKSWKEFYKTNDLTQPGEFIS

AT4G03160.1 BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT4G03170.1)2.3e-1639.81Show/hide
Query:  KQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLC
        +QL  +DV DNQ RL L KE V   +D +   ++    G++V VY   G  + M+ K+W     VLT  WK F K+  L +  +F+++WMFRH  T+++C
Subjt:  KQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLC

Query:  FAI
        FAI
Subjt:  FAI

AT4G03170.1 AP2/B3-like transcriptional factor family protein1.4e-1844.04Show/hide
Query:  SPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLW-ASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHV
        S P  KQL  +DV  +Q  L L KE V   + P   D E+   GI V VY  +G+   M FK+W   K  VLT  WK+F +   L+   +F++VWMFRH+
Subjt:  SPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLW-ASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHV

Query:  VTQKLCFAI
         T+KLCFAI
Subjt:  VTQKLCFAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGATGTACATTACACCTACAACAACAAAATAGTTGCAGAGGATGTCTACAAAGCATCTTTGATTCTTTATGACATGGCGTTAAGTAAAAGTGTGGAACCATTTGA
AGAGCCGATAGATCGTTTCAACAATCAACTTTCAAGTACTTCCACTTCTCTAGTCAATGAACAATCTCCAGTAGTCAACGAACATGCTCCTGTAGTCAATGAAGTTCTAC
CCAACAATGATGACGATAATGGCAATAATGAAAATGTGGCAGCGGCGGTCGTGGTCGGTAGAGATCAGGGTAGATTTCCTCCAATGGCAGTGATCCAAAACATAATTGGA
GAGTGCAGCCCACCATTTGTGAAGCAATTGACGAAAACAGACGTGACTGACAATCAAGGGAGATTAGCACTTCATAAAGAGTTTGTGAATCTTAATTTAGATCCCATGTT
CAATGATGACGAGGATCTGGAGGATGGAATTAGTGTTATTGTTTATGATATTGAAGGAAGAGAATACGACATGATATTCAAGCTTTGGGCTTCCAAACTTTACGTGCTAA
CAAAAAGTTGGAAGGAGTTTTACAAGACCAATGATTTGACGCAACCGGGTGAATTTATTAGTGTTTGGATGTTTCGACATGTCGTCACTCAGAAGCTTTGCTTTGCTATT
ATGAGAGGACAAGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGATGTACATTACACCTACAACAACAAAATAGTTGCAGAGGATGTCTACAAAGCATCTTTGATTCTTTATGACATGGCGTTAAGTAAAAGTGTGGAACCATTTGA
AGAGCCGATAGATCGTTTCAACAATCAACTTTCAAGTACTTCCACTTCTCTAGTCAATGAACAATCTCCAGTAGTCAACGAACATGCTCCTGTAGTCAATGAAGTTCTAC
CCAACAATGATGACGATAATGGCAATAATGAAAATGTGGCAGCGGCGGTCGTGGTCGGTAGAGATCAGGGTAGATTTCCTCCAATGGCAGTGATCCAAAACATAATTGGA
GAGTGCAGCCCACCATTTGTGAAGCAATTGACGAAAACAGACGTGACTGACAATCAAGGGAGATTAGCACTTCATAAAGAGTTTGTGAATCTTAATTTAGATCCCATGTT
CAATGATGACGAGGATCTGGAGGATGGAATTAGTGTTATTGTTTATGATATTGAAGGAAGAGAATACGACATGATATTCAAGCTTTGGGCTTCCAAACTTTACGTGCTAA
CAAAAAGTTGGAAGGAGTTTTACAAGACCAATGATTTGACGCAACCGGGTGAATTTATTAGTGTTTGGATGTTTCGACATGTCGTCACTCAGAAGCTTTGCTTTGCTATT
ATGAGAGGACAAGCTTAA
Protein sequenceShow/hide protein sequence
MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSLVNEQSPVVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFPPMAVIQNIIG
ECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCFAI
MRGQA