; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G04870 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G04870
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionSmall ubiquitin-related modifier
Genome locationChr3:3959478..3961747
RNA-Seq ExpressionCSPI03G04870
SyntenyCSPI03G04870
Gene Ontology termsGO:0016925 - protein sumoylation (biological process)
GO:0030245 - cellulose catabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008810 - cellulase activity (molecular function)
GO:0031386 - protein tag (molecular function)
GO:0044389 - ubiquitin-like protein ligase binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR022617 - Rad60/SUMO-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149348.1 small ubiquitin-related modifier 1 [Cucumis sativus]2.1e-48100Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII
XP_018812104.1 small ubiquitin-related modifier 1 [Juglans regia]8.3e-4595.92Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGA
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV+LNSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGG  A
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGA
XP_022158763.1 small ubiquitin-related modifier 1-like [Momordica charantia]4.0e-4797Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSV+LNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGG II
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII
XP_023895256.1 small ubiquitin-related modifier 1 [Quercus suber]1.4e-4494.9Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGA
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD++SIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGG  A
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGA
XP_038905908.1 small ubiquitin-related modifier 1 [Benincasa hispida]2.7e-4899Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGA+I
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII
TrEMBL top hitse value%identityAlignment
A0A0A0L2Y3 Small ubiquitin-related modifier1.0e-48100Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII
A0A1S3BKS1 Small ubiquitin-related modifier1.0e-48100Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII
A0A2I4DY72 Small ubiquitin-related modifier4.0e-4595.92Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGA
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV+LNSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGG  A
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGA
A0A6A1VQH5 Small ubiquitin-related modifier4.0e-4595.92Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGA
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV+LNSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGG  A
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGA
A0A6J1DX09 Small ubiquitin-related modifier1.9e-4797Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSV+LNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGG II
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII
SwissProt top hitse value%identityAlignment
O13351 Ubiquitin-like protein pmt3/smt31.4e-2356.38Show/hide
Query:  SGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
        +G T+Q++ K  T+   HINLKV GQD NEVFF+IK++T+  KLM  YC RQ   +NS+ FL DG R+R +QTP EL+MEDGD+I+A+L Q GG
Subjt:  SGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
P55852 Small ubiquitin-related modifier 14.7e-4392.39Show/hide
Query:  NQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGG
        NQEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFLFDGRRLRAEQTP+EL+MEDGDEIDAMLHQTGG G
Subjt:  NQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGG
P55857 Small ubiquitin-related modifier 19.2e-3987.91Show/hide
Query:  EEDKKPT---DQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
        EEDKKP       AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+N+IAFLFDGRRLR EQTP+ELEMEDGDEIDAMLHQTGG
Subjt:  EEDKKPT---DQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
Q9FLP5 Small ubiquitin-related modifier 35.6e-2053.93Show/hide
Query:  EDKKPTD--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
        +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G R+   +TP+EL+MEDGD IDA    +GG
Subjt:  EDKKPTD--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
Q9FLP6 Small ubiquitin-related modifier 28.9e-4295.51Show/hide
Query:  EEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG
        EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGGG
Subjt:  EEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG
Arabidopsis top hitse value%identityAlignment
AT4G26840.1 small ubiquitin-like modifier 13.4e-4492.39Show/hide
Query:  NQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGG
        NQEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFLFDGRRLRAEQTP+EL+MEDGDEIDAMLHQTGG G
Subjt:  NQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGG
AT5G55160.1 small ubiquitin-like modifier 26.3e-4395.51Show/hide
Query:  EEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG
        EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGGG
Subjt:  EEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG
AT5G55160.2 small ubiquitin-like modifier 23.8e-4083.33Show/hide
Query:  EEDKKPTDQSAHINLKVKGQ-------------DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTG
        EEDKKP DQ AHINLKVKGQ             DGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTG
Subjt:  EEDKKPTDQSAHINLKVKGQ-------------DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTG

Query:  GG
        GG
Subjt:  GG
AT5G55170.1 small ubiquitin-like modifier 34.0e-2153.93Show/hide
Query:  EDKKPTD--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
        +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G R+   +TP+EL+MEDGD IDA    +GG
Subjt:  EDKKPTD--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
AT5G55856.1 Ubiquitin-like superfamily protein2.0e-2052.33Show/hide
Query:  DKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
        DKKP   S+HI +KVK QD   V+FRIKR  +L+K+M+AY D+  V+++++ FLFDG R++  QTP EL +ED DEI+A   Q GG
Subjt:  DKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGGTGTCACCAACCAAGAAGAGGACAAGAAACCTACCGATCAATCAGCTCATATCAACCTCAAAGTCAAGGGCCAGGATGGGAATGAAGTTTTCTTCCGGATCAA
AAGGAGTACCCAACTGAAGAAGCTAATGAATGCTTACTGTGACAGGCAGTCGGTTGATTTGAACTCCATTGCATTCTTGTTTGACGGCCGCCGATTGCGTGCAGAGCAGA
CTCCGGAAGAGCTGGAAATGGAGGATGGAGATGAGATTGATGCAATGCTTCATCAGACTGGAGGTGGAGGTGCTATTATCTAA
mRNA sequenceShow/hide mRNA sequence
GTTGGATTTGTGAATCCATAGACACATCCTGGCCGTCCATTTAGAACCTCAAAACCTCCACCCACTTTCCCTTTGAAGACTCAGAGTCACATATAGTGCAAAACCAAGGC
GAACTAAGCACTTCCAGATTTTCCCAACCCTTCTTCTTTACAAACAAACCCCACCCAAAATTTCCCTTCTTCCAACTTCAAATAATGTCGGGTGTCACCAACCAAGAAGA
GGACAAGAAACCTACCGATCAATCAGCTCATATCAACCTCAAAGTCAAGGGCCAGGATGGGAATGAAGTTTTCTTCCGGATCAAAAGGAGTACCCAACTGAAGAAGCTAA
TGAATGCTTACTGTGACAGGCAGTCGGTTGATTTGAACTCCATTGCATTCTTGTTTGACGGCCGCCGATTGCGTGCAGAGCAGACTCCGGAAGAGCTGGAAATGGAGGAT
GGAGATGAGATTGATGCAATGCTTCATCAGACTGGAGGTGGAGGTGCTATTATCTAAGTTAACCTCGAAGACAAAATAGTTCCTCAAACATCATTCGCAATCCTATAATT
TTCTTACTACTGCTAGTATATGCCTGAAATTCTGCTGCTGGATGTTGCTTTTGTCTATATAAATTATGTCTACGATTTCTGCCTCTTCCAGTTCTCTAGAAGTGAAAGAG
ACTATGTTGGGACTCCTTTATATACGTAAATGCTGTTGATGTCGATTCCTCCTGTTTCATTTTTCTGAGTACATCCTGAAGTTACAATGTGATTATGTTTGGCTTGTGTA
TCTTTGTTTCTGGGACATGAAACTTTCAAAAAGGTAAAATAACAGTTCTTGTGAAGGAGCTTCAAAGATTTTTAGCGTACGTGCATCTCAACTAATCTCATGGAACAATC
GTCTCATTCTACAATAACCCTAGGTAGGTGGCTGCGAAAAGGATCTTTAGAGTATAACACGGTTTTACCAAGAAGGCTTAATTCTGCCATGTGCCTACTGTACTCAAAGC
TTGGGAAGTTAATAAGCATATTGAAAGATGGACATTGTTTTTCAAAGCAGTACAAGGTATAATGTTCACTGCCTTTAATGTTGTAGAAAGTCCCAAAATCATGAAGAAAA
GAAGGTTTTGGTGTGGAGTGCAGGTAAGTTGTTATCTGTCTCATAATGAATCTGAAAATGGGTACTACTTTATTTTAATGAATAAACAACTGAAAAATATTGATCAAGAA
AGCACTTTGCTTTGCTATTTGATGAATCACAAAAGGTAATATTCTTTCTTTAGAGGTAGTTTGTTTGCTGGAGAAGCACAGAAC
Protein sequenceShow/hide protein sequence
MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII