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CSPI03G04930 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G04930
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionLIM and calponin domains-containing protein 1, putative
Genome locationChr3:3987058..3987745
RNA-Seq ExpressionCSPI03G04930
SyntenyCSPI03G04930
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008480 - Protein of unknown function DUF761, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAY65911.1 hypothetical protein CUMW_244680 [Citrus unshiu]2.6e-3954.17Show/hide
Query:  FKKSEIVVLLSLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLND----PPPDHQDKTNKLSLTSPETVASSTETSALKKHRALEKAHSDKISS
        FKKS+I++L  L  LL+ITPLLSSSLRPTYLYF+FN+LIIALG +AGLL+     PP DH++     +        +S   S +KK +A+EK+ S+KI S
Subjt:  FKKSEIVVLLSLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLND----PPPDHQDKTNKLSLTSPETVASSTETSALKKHRALEKAHSDKISS

Query:  GNVKMESLKKCPSASSIFYIGEGDSEAEETTGTIEDG----EEEVVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF
        G VK+  LKKCPS  S+F+IG G++E  +    + DG    +EE  VGG    +GQELF +AE FIGNFYKQLKMQ+E+SWK I GFYQK F
Subjt:  GNVKMESLKKCPSASSIFYIGEGDSEAEETTGTIEDG----EEEVVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF

KAA0055857.1 putative LIM and calponin domains-containing protein 1 [Cucumis melo var. makuwa]6.6e-8896.81Show/hide
Query:  MMNKFKKSEIVVLLSLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETSALKKHRALEKAHSDKISS
        MMNKFKKSEI+VLL LTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETS LKKHRALEKAHSDKISS
Subjt:  MMNKFKKSEIVVLLSLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETSALKKHRALEKAHSDKISS

Query:  GNVKMESLKKCPSASSIFYIGEGDSEAEETTGTIEDGEEEVVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF
        GNVKMESLKKCPSASSIFYIGEGDSEAEETTG IED EEE VVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF
Subjt:  GNVKMESLKKCPSASSIFYIGEGDSEAEETTGTIEDGEEEVVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF

KAF3962703.1 hypothetical protein CMV_012814 [Castanea mollissima]4.4e-3950.93Show/hide
Query:  MNKFKKSEIVVLLSLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASS-----------------TETSAL
        MNKFKKS++V+L  L +LL+ITPLLSSSLRP YLYFI N+LIIALG +AGLL+      +DK   + L +P+ +ASS                    S  
Subjt:  MNKFKKSEIVVLLSLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASS-----------------TETSAL

Query:  KKHRALEKAHSDKISSGNVKMESLKKCPSASSIFYIGEGDSEA----------EETTGTIEDGEEEVVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKE
        KK + +EK+ S+KI  G+VK++ + KCPS  S+F+IG G+SEA          EE  G  +DGEEEV        +GQELF +AETFIGNFYKQLKMQ+E
Subjt:  KKHRALEKAHSDKISSGNVKMESLKKCPSASSIFYIGEGDSEA----------EETTGTIEDGEEEVVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKE

Query:  ESWKNIHGFYQKRF
        +SWK IH FYQK F
Subjt:  ESWKNIHGFYQKRF

KAG6577458.1 hypothetical protein SDJN03_25032, partial [Cucurbita argyrosperma subsp. sororia]3.2e-4257.22Show/hide
Query:  MNKFKKSEIVVLLSLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETSALKKHRALEKAHSDKISSG
        M++ K+SE+V++L LT+LL+ITPLLSSSLRPTYLYF+FNLLI+      GLL+   P++    N  +  SP T A++        HRALEKAHSD I   
Subjt:  MNKFKKSEIVVLLSLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETSALKKHRALEKAHSDKISSG

Query:  NVKMESLKKCPSASSIFYIGEGDSEAEETTGTIEDGEEEVVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF
        N K+ESL KCPSAS+IF+IG+GDSE            EE   GG    NGQ+LFAQAETFIGNFYKQL+MQK+ESWKN+HGFY+K F
Subjt:  NVKMESLKKCPSASSIFYIGEGDSEAEETTGTIEDGEEEVVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF

KGN56109.1 hypothetical protein Csa_011766 [Cucumis sativus]3.6e-94100Show/hide
Query:  MMNKFKKSEIVVLLSLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETSALKKHRALEKAHSDKISS
        MMNKFKKSEIVVLLSLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETSALKKHRALEKAHSDKISS
Subjt:  MMNKFKKSEIVVLLSLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETSALKKHRALEKAHSDKISS

Query:  GNVKMESLKKCPSASSIFYIGEGDSEAEETTGTIEDGEEEVVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF
        GNVKMESLKKCPSASSIFYIGEGDSEAEETTGTIEDGEEEVVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF
Subjt:  GNVKMESLKKCPSASSIFYIGEGDSEAEETTGTIEDGEEEVVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF

TrEMBL top hitse value%identityAlignment
A0A067F414 Uncharacterized protein2.1e-3953.89Show/hide
Query:  FKKSEIVVLLSLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLND----PPPDHQDKTNKLSLTSPETVASSTETSALKKHRALEKAHSDKISS
        FKKS+I++L  L  LL+ITPLLSSSLRPTYLYF+FN+LIIALG +AGLL+     PP DH++     +        +S   S +KK +A+EK+ S+KI S
Subjt:  FKKSEIVVLLSLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLND----PPPDHQDKTNKLSLTSPETVASSTETSALKKHRALEKAHSDKISS

Query:  GNVKMESLKKCPSASSIFYIGEGDSEAEET-----TGTIEDGEEEVVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF
        G VK+  LKKCPS  S+F+IG G++E  +       G  E+ EEE V    G  +GQELF +AE FIGNFYKQLKMQ+E+SWK I GFYQK F
Subjt:  GNVKMESLKKCPSASSIFYIGEGDSEAEET-----TGTIEDGEEEVVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF

A0A0A0L509 Uncharacterized protein1.8e-94100Show/hide
Query:  MMNKFKKSEIVVLLSLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETSALKKHRALEKAHSDKISS
        MMNKFKKSEIVVLLSLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETSALKKHRALEKAHSDKISS
Subjt:  MMNKFKKSEIVVLLSLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETSALKKHRALEKAHSDKISS

Query:  GNVKMESLKKCPSASSIFYIGEGDSEAEETTGTIEDGEEEVVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF
        GNVKMESLKKCPSASSIFYIGEGDSEAEETTGTIEDGEEEVVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF
Subjt:  GNVKMESLKKCPSASSIFYIGEGDSEAEETTGTIEDGEEEVVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF

A0A2H5QMS9 Uncharacterized protein1.2e-3954.17Show/hide
Query:  FKKSEIVVLLSLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLND----PPPDHQDKTNKLSLTSPETVASSTETSALKKHRALEKAHSDKISS
        FKKS+I++L  L  LL+ITPLLSSSLRPTYLYF+FN+LIIALG +AGLL+     PP DH++     +        +S   S +KK +A+EK+ S+KI S
Subjt:  FKKSEIVVLLSLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLND----PPPDHQDKTNKLSLTSPETVASSTETSALKKHRALEKAHSDKISS

Query:  GNVKMESLKKCPSASSIFYIGEGDSEAEETTGTIEDG----EEEVVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF
        G VK+  LKKCPS  S+F+IG G++E  +    + DG    +EE  VGG    +GQELF +AE FIGNFYKQLKMQ+E+SWK I GFYQK F
Subjt:  GNVKMESLKKCPSASSIFYIGEGDSEAEETTGTIEDG----EEEVVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF

A0A5D3DK86 Putative LIM and calponin domains-containing protein 13.2e-8896.81Show/hide
Query:  MMNKFKKSEIVVLLSLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETSALKKHRALEKAHSDKISS
        MMNKFKKSEI+VLL LTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETS LKKHRALEKAHSDKISS
Subjt:  MMNKFKKSEIVVLLSLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETSALKKHRALEKAHSDKISS

Query:  GNVKMESLKKCPSASSIFYIGEGDSEAEETTGTIEDGEEEVVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF
        GNVKMESLKKCPSASSIFYIGEGDSEAEETTG IED EEE VVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF
Subjt:  GNVKMESLKKCPSASSIFYIGEGDSEAEETTGTIEDGEEEVVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF

V4UT10 Uncharacterized protein2.1e-3953.89Show/hide
Query:  FKKSEIVVLLSLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLND----PPPDHQDKTNKLSLTSPETVASSTETSALKKHRALEKAHSDKISS
        FKKS+I++L  L  LL+ITPLLSSSLRPTYLYF+FN+LIIALG +AGLL+     PP DH++     +        +S   S +KK +A+EK+ S+KI S
Subjt:  FKKSEIVVLLSLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLND----PPPDHQDKTNKLSLTSPETVASSTETSALKKHRALEKAHSDKISS

Query:  GNVKMESLKKCPSASSIFYIGEGDSEAEET-----TGTIEDGEEEVVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF
        G VK+  LKKCPS  S+F+IG G++E  +       G  E+ EEE V    G  +GQELF +AE FIGNFYKQLKMQ+E+SWK I GFYQK F
Subjt:  GNVKMESLKKCPSASSIFYIGEGDSEAEET-----TGTIEDGEEEVVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAACAAGTTCAAGAAATCAGAAATTGTAGTGCTTTTAAGCCTCACAATTCTTCTAGTAATAACTCCTCTTCTTTCCTCATCCCTAAGACCAACTTATCTCTACTT
CATCTTCAACCTCCTCATCATTGCCCTTGGAGTACAAGCTGGGCTTCTCAATGACCCTCCTCCCGATCATCAAGACAAGACCAACAAGCTTTCTCTAACTTCACCTGAAA
CCGTTGCTTCGTCCACGGAAACCTCCGCCCTCAAGAAGCATAGGGCTTTGGAGAAGGCTCACTCCGACAAGATTTCATCCGGCAATGTGAAAATGGAATCTCTTAAGAAG
TGTCCCTCCGCTTCGAGTATTTTCTATATCGGAGAGGGCGATAGCGAGGCTGAGGAGACGACAGGGACGATCGAGGACGGGGAAGAGGAGGTCGTTGTCGGGGGCGGTGG
AAATAATAATGGTCAAGAATTGTTTGCTCAAGCTGAGACGTTTATTGGGAACTTTTACAAGCAGTTGAAGATGCAGAAAGAAGAGTCTTGGAAAAACATTCATGGTTTCT
ATCAAAAACGCTTTTGA
mRNA sequenceShow/hide mRNA sequence
AGAACAACTCCTATACACTTTTGGGAGAATATTTAGTAGCTAGCAAGATCAAAGGTTGAGAGAAATGATGAACAAGTTCAAGAAATCAGAAATTGTAGTGCTTTTAAGCC
TCACAATTCTTCTAGTAATAACTCCTCTTCTTTCCTCATCCCTAAGACCAACTTATCTCTACTTCATCTTCAACCTCCTCATCATTGCCCTTGGAGTACAAGCTGGGCTT
CTCAATGACCCTCCTCCCGATCATCAAGACAAGACCAACAAGCTTTCTCTAACTTCACCTGAAACCGTTGCTTCGTCCACGGAAACCTCCGCCCTCAAGAAGCATAGGGC
TTTGGAGAAGGCTCACTCCGACAAGATTTCATCCGGCAATGTGAAAATGGAATCTCTTAAGAAGTGTCCCTCCGCTTCGAGTATTTTCTATATCGGAGAGGGCGATAGCG
AGGCTGAGGAGACGACAGGGACGATCGAGGACGGGGAAGAGGAGGTCGTTGTCGGGGGCGGTGGAAATAATAATGGTCAAGAATTGTTTGCTCAAGCTGAGACGTTTATT
GGGAACTTTTACAAGCAGTTGAAGATGCAGAAAGAAGAGTCTTGGAAAAACATTCATGGTTTCTATCAAAAACGCTTTTGAGGAAATGAATGAAAATTATATGAAAAATA
TATGAACACAAAGACACAAAAGAGAAAG
Protein sequenceShow/hide protein sequence
MMNKFKKSEIVVLLSLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETSALKKHRALEKAHSDKISSGNVKMESLKK
CPSASSIFYIGEGDSEAEETTGTIEDGEEEVVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF