CuGenDBv2

Gene ID	CSPI03G05050
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	DUF4228 domain protein
Genome location	Chr3:4095314..4095730
RNA-Seq Expression	CSPI03G05050
Synteny	CSPI03G05050
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0033991.1 DUF4228 domain protein [Cucumis melo var. makuwa]

2.1e-35

86.81

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Query:  VPMSDDDEEMEEMLRRRLVVKNGAQKCSASTTTELKIRITKRELEKLLCKVDVEELPVTELLSKLIDVGDTFESTHQRSWRPSLQSIPEVN
        +PMSDD+EE+EEMLRRRLVV++ AQKCSASTTTELKIRITK+ELEKLLCKVD+EELPV ELLSKLIDVGD FESTH+RSW+PSLQSIPEVN
Subjt:  VPMSDDDEEMEEMLRRRLVVKNGAQKCSASTTTELKIRITKRELEKLLCKVDVEELPVTELLSKLIDVGDTFESTHQRSWRPSLQSIPEVN

KAE8650133.1 hypothetical protein Csa_011778 [Cucumis sativus]

3.5e-46

98.99

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Query:  MGNCTSNKYLAETIVPMSDDDEEMEEMLRRRLVVKNGAQKCSASTTTELKIRITKRELEKLLCKVDVEELPVTELLSKLIDVGDTFESTHQRSWRPSLQ
        MGNCTSNKYLAETIVPMSDDDEE+EEMLRRRLVVKNGAQKCSASTTTELKIRITKRELEKLLCKVDVEELPVTELLSKLIDVGDTFESTHQRSWRPSLQ
Subjt:  MGNCTSNKYLAETIVPMSDDDEEMEEMLRRRLVVKNGAQKCSASTTTELKIRITKRELEKLLCKVDVEELPVTELLSKLIDVGDTFESTHQRSWRPSLQ

XP_008463409.1 PREDICTED: uncharacterized protein LOC103501580 [Cucumis melo]

2.4e-42

87.62

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Query:  MGNCTSNKYLAETIVPMSDDDEEMEEMLRRRLVVKNGAQKCSASTTTELKIRITKRELEKLLCKVDVEELPVTELLSKLIDVGDTFESTHQRSWRPSLQS
        MGNCTSNKYLAET +PMSDD+EE+EEMLRRRLVV++ AQKCSASTTTELKIRITK+ELEKLLCKVD+EELPV ELLSKLIDVGD FESTH+RSW+PSLQS
Subjt:  MGNCTSNKYLAETIVPMSDDDEEMEEMLRRRLVVKNGAQKCSASTTTELKIRITKRELEKLLCKVDVEELPVTELLSKLIDVGDTFESTHQRSWRPSLQS

Query:  IPEVN
        IPEVN
Subjt:  IPEVN

XP_031739098.1 uncharacterized protein LOC116402843 [Cucumis sativus]

9.0e-50

99.05

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Query:  MGNCTSNKYLAETIVPMSDDDEEMEEMLRRRLVVKNGAQKCSASTTTELKIRITKRELEKLLCKVDVEELPVTELLSKLIDVGDTFESTHQRSWRPSLQS
        MGNCTSNKYLAETIVPMSDDDEE+EEMLRRRLVVKNGAQKCSASTTTELKIRITKRELEKLLCKVDVEELPVTELLSKLIDVGDTFESTHQRSWRPSLQS
Subjt:  MGNCTSNKYLAETIVPMSDDDEEMEEMLRRRLVVKNGAQKCSASTTTELKIRITKRELEKLLCKVDVEELPVTELLSKLIDVGDTFESTHQRSWRPSLQS

Query:  IPEVN
        IPEVN
Subjt:  IPEVN

XP_038904231.1 uncharacterized protein LOC120090574 [Benincasa hispida]

9.9e-41

86.67

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Query:  MGNCTSNKYLAETIVPMSDDDEEMEEMLRRRLVVKNGAQKCSASTTTELKIRITKRELEKLLCKVDVEELPVTELLSKLIDVGDTFESTHQRSWRPSLQS
        MGNCTSNKYLAET +PMSD+DEE  E +RRRLVV +GA+KCSA+TTTELKIRITKRELEKLL KVDVEELPVTELLS+LIDVGD FESTHQRSWRPSLQS
Subjt:  MGNCTSNKYLAETIVPMSDDDEEMEEMLRRRLVVKNGAQKCSASTTTELKIRITKRELEKLLCKVDVEELPVTELLSKLIDVGDTFESTHQRSWRPSLQS

Query:  IPEVN
        IPEVN
Subjt:  IPEVN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L2D8 Uncharacterized protein

4.3e-50

99.05

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Query:  MGNCTSNKYLAETIVPMSDDDEEMEEMLRRRLVVKNGAQKCSASTTTELKIRITKRELEKLLCKVDVEELPVTELLSKLIDVGDTFESTHQRSWRPSLQS
        MGNCTSNKYLAETIVPMSDDDEE+EEMLRRRLVVKNGAQKCSASTTTELKIRITKRELEKLLCKVDVEELPVTELLSKLIDVGDTFESTHQRSWRPSLQS
Subjt:  MGNCTSNKYLAETIVPMSDDDEEMEEMLRRRLVVKNGAQKCSASTTTELKIRITKRELEKLLCKVDVEELPVTELLSKLIDVGDTFESTHQRSWRPSLQS

Query:  IPEVN
        IPEVN
Subjt:  IPEVN

A0A1S3CJ77 uncharacterized protein LOC103501580

1.1e-42

87.62

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Query:  MGNCTSNKYLAETIVPMSDDDEEMEEMLRRRLVVKNGAQKCSASTTTELKIRITKRELEKLLCKVDVEELPVTELLSKLIDVGDTFESTHQRSWRPSLQS
        MGNCTSNKYLAET +PMSDD+EE+EEMLRRRLVV++ AQKCSASTTTELKIRITK+ELEKLLCKVD+EELPV ELLSKLIDVGD FESTH+RSW+PSLQS
Subjt:  MGNCTSNKYLAETIVPMSDDDEEMEEMLRRRLVVKNGAQKCSASTTTELKIRITKRELEKLLCKVDVEELPVTELLSKLIDVGDTFESTHQRSWRPSLQS

Query:  IPEVN
        IPEVN
Subjt:  IPEVN

A0A5A7SX05 DUF4228 domain protein

1.0e-35

86.81

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Query:  VPMSDDDEEMEEMLRRRLVVKNGAQKCSASTTTELKIRITKRELEKLLCKVDVEELPVTELLSKLIDVGDTFESTHQRSWRPSLQSIPEVN
        +PMSDD+EE+EEMLRRRLVV++ AQKCSASTTTELKIRITK+ELEKLLCKVD+EELPV ELLSKLIDVGD FESTH+RSW+PSLQSIPEVN
Subjt:  VPMSDDDEEMEEMLRRRLVVKNGAQKCSASTTTELKIRITKRELEKLLCKVDVEELPVTELLSKLIDVGDTFESTHQRSWRPSLQSIPEVN

A0A5D3BTQ9 DUF4228 domain protein

1.1e-42

87.62

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Query:  MGNCTSNKYLAETIVPMSDDDEEMEEMLRRRLVVKNGAQKCSASTTTELKIRITKRELEKLLCKVDVEELPVTELLSKLIDVGDTFESTHQRSWRPSLQS
        MGNCTSNKYLAET +PMSDD+EE+EEMLRRRLVV++ AQKCSASTTTELKIRITK+ELEKLLCKVD+EELPV ELLSKLIDVGD FESTH+RSW+PSLQS
Subjt:  MGNCTSNKYLAETIVPMSDDDEEMEEMLRRRLVVKNGAQKCSASTTTELKIRITKRELEKLLCKVDVEELPVTELLSKLIDVGDTFESTHQRSWRPSLQS

Query:  IPEVN
        IPEVN
Subjt:  IPEVN

A0A6J1J7P7 uncharacterized protein LOC111483315

9.4e-29

69.16

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Query:  MGNCTSNKYLAETIVPMSDDDEEMEEMLRRRLVVKNGAQKCS---ASTTTELKIRITKRELEKLLCKVDVEELPVTELLSKLIDVGDTFESTHQRSWRPS
        MGNCTSNKYLAET +PMS ++EE+ E L+R+L   +GA + S    +TTTE+KIR+TKRELEKLL KV+VEELPVTELL +LI+VGD  ESTH+RSWRPS
Subjt:  MGNCTSNKYLAETIVPMSDDDEEMEEMLRRRLVVKNGAQKCS---ASTTTELKIRITKRELEKLLCKVDVEELPVTELLSKLIDVGDTFESTHQRSWRPS

Query:  LQSIPEV
        LQSIPE+
Subjt:  LQSIPEV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G20340.1 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.

2.2e-06

42.42

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Query:  SASTTTELKIRITKRELEKLLCKVDVEELPVTE--LLSKLIDVGDTFESTHQRSWRPSLQSIPEVN
        S+  + E+KIR+TK++L  LL KV+V +L   +      +++     E+  QR WRP LQSIPEVN
Subjt:  SASTTTELKIRITKRELEKLLCKVDVEELPVTE--LLSKLIDVGDTFESTHQRSWRPSLQSIPEVN

AT4G21920.1 unknown protein

1.8e-08

38.3

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Query:  DDDEEMEEMLRRRLVVKNGAQKCSASTTTELKIRITKRELEKLLCKVDVEELPVTELLSKLI-DVGDTF------ESTHQRSWRPSLQSIPEVN
        DD+++ E++L     V       S+S   E+KIRITK+ELE L+  + ++ L   E+LSKLI + GD         + H + W+P LQSIPE++
Subjt:  DDDEEMEEMLRRRLVVKNGAQKCSASTTTELKIRITKRELEKLLCKVDVEELPVTELLSKLI-DVGDTF------ESTHQRSWRPSLQSIPEVN

Sequences

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CDS sequence

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ATGGGAAATTGTACAAGCAACAAATATTTGGCAGAGACAATAGTGCCGATGAGCGATGACGACGAAGAAATGGAGGAGATGCTGAGAAGGAGGCTAGTTGTCAAA
AACGGAGCTCAGAAATGTTCAGCGAGTACCACGACGGAGTTGAAGATTAGGATCACAAAGAGAGAGCTGGAGAAGTTGTTGTGCAAAGTGGATGTGGAGGAGTTG
CCAGTGACGGAGCTGTTATCCAAGTTAATCGATGTTGGCGATACATTCGAGAGTACCCATCAGCGATCATGGCGGCCTTCTTTGCAAAGTATTCCTGAGGTGAAC
TGA

mRNA sequence

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TTTCTCTCTTTCTATCTCAAAAGATAACCTCATCACCATGGGAAATTGTACAAGCAACAAATATTTGGCAGAGACAATAGTGCCGATGAGCGATGACGACGAAGA
AATGGAGGAGATGCTGAGAAGGAGGCTAGTTGTCAAAAACGGAGCTCAGAAATGTTCAGCGAGTACCACGACGGAGTTGAAGATTAGGATCACAAAGAGAGAGCT
GGAGAAGTTGTTGTGCAAAGTGGATGTGGAGGAGTTGCCAGTGACGGAGCTGTTATCCAAGTTAATCGATGTTGGCGATACATTCGAGAGTACCCATCAGCGATC
ATGGCGGCCTTCTTTGCAAAGTATTCCTGAGGTGAACTGAACAACATATATGTTAAATATTGTAATTATTGGATGTAGACAGGGGGAGTATTTTGAACCTAC

Protein sequence

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MGNCTSNKYLAETIVPMSDDDEEMEEMLRRRLVVKNGAQKCSASTTTELKIRITKRELEKLLCKVDVEELPVTELLSKLIDVGDTFESTHQRSWRPSLQSIPEVN

CSPI03G05050 (gene) of Cucumber (PI 183967) v1 genome