CuGenDBv2

Gene ID	CSPI03G05130
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
Genome location	Chr3:4157491..4162695
RNA-Seq Expression	CSPI03G05130
Synteny	CSPI03G05130
Gene Ontology terms	GO:0032981 - mitochondrial respiratory chain complex I assembly (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0070469 - respirasome (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0033972.1 NDUFA12 domain-containing protein [Cucumis melo var. makuwa]

2.7e-94

96.17

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Query:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER
        MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWICWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQPPT
        NSKEG LRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRD+LRNSNEKE VQEKPIPESSEPVGSGHTF+PGTWQPPT
Subjt:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQPPT

XP_004152928.1 uncharacterized protein LOC101214441 isoform X2 [Cucumis sativus]

5.8e-97

99.45

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Query:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER
        MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQPPT
        NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEA QEKPIPESSEPVGSGHTFKPGTWQPPT
Subjt:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQPPT

XP_031738721.1 uncharacterized protein LOC101214441 isoform X1 [Cucumis sativus]

3.3e-84

98.19

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Query:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER
        MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSE
        NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEA QEKPIPE  E
Subjt:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSE

XP_038903173.1 uncharacterized protein LOC120089839 isoform X1 [Benincasa hispida]

6.9e-90

91.05

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Query:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER
        MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWICWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPE-------SSEPVGSGHTFKPGTWQPPT
        NSKEGNLRKIISTGQV GPDLKSFIRQ PTGSEGAQDVEGL TRDSLRNSNEKEAV+EKPIP+       SSEPVGSG TF+PGTWQPPT
Subjt:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPE-------SSEPVGSGHTFKPGTWQPPT

XP_038903174.1 uncharacterized protein LOC120089839 isoform X2 [Benincasa hispida]

2.5e-92

95.08

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Query:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER
        MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWICWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQPPT
        NSKEGNLRKIISTGQV GPDLKSFIRQ PTGSEGAQDVEGL TRDSLRNSNEKEAV+EKPIPESSEPVGSG TF+PGTWQPPT
Subjt:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQPPT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L526 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

2.8e-97

99.45

Show/hide

Query:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER
        MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQPPT
        NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEA QEKPIPESSEPVGSGHTFKPGTWQPPT
Subjt:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQPPT

A0A5A7SS01 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

1.3e-94

96.17

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Query:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER
        MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWICWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQPPT
        NSKEG LRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRD+LRNSNEKE VQEKPIPESSEPVGSGHTF+PGTWQPPT
Subjt:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQPPT

A0A6J1DNE9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

2.0e-82

84.15

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Query:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER
        MSKLFGKIA+FFS+RT+ GVDK+GN+YFF KEEIDG+MKEKRWV+FKGEDDPTSIPVEWICWLNGQRKKAPTPEEM ELEARRERVRQNV LLKK+EMER
Subjt:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQPPT
        NS+EGNLRK+IS  QV GPDL SFIRQ PTGSEGAQD EG   R+S RNS EKEAV+EKPIPESSEPVGSG TF+PGTWQPPT
Subjt:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQPPT

A0A6J1JSL7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

2.4e-80

84.15

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Query:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER
        MSKLF KIA FF++RTL+GVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWICWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQPPT
         SKE NLRK++ST    GP+LKSFIRQ PTGSEGAQD EG   +DSLRNS E EA +EKPIPESSEP+GSG TF+PGTWQPPT
Subjt:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQPPT

A0A6J1JVV8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

4.8e-81

84.7

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Query:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER
        MSKLF KIA FF++RTL+GVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWICWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQPPT
         SKE NLRK++ST  V GP+LKSFIRQ PTGSEGAQD EG   +DSLRNS E EA +EKPIPESSEP+GSG TF+PGTWQPPT
Subjt:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQPPT

SwissProt top hits

e value

%identity

Alignment

Q54MV7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

9.3e-05

44.07

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Query:  TLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKG--EDDPTSIPVEWICWLNGQRKKAPT
        TLVGVDK GNRY+  ++EI G     RWV +     +DPT+IP E+  W++    K P+
Subjt:  TLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKG--EDDPTSIPVEWICWLNGQRKKAPT

Arabidopsis top hits

e value

%identity

Alignment

AT4G26965.1 NADH:ubiquinone oxidoreductase, 17.2kDa subunit

2.6e-55

59.46

Show/hide

Query:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER
        MS+L+ + A  FS+++ +GVDK GN+YF   EEIDG +KEKRWV F+ E+DPTSIPVEWICWLNGQRK+APTPEEM ELEARRERV+ NVALLKKEE E+
Subjt:  MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLR-NSNEKEAVQ-EKPIPESSEPVGSGHTFKPGTWQPPT
         ++ G  RK I+ G+V GPDL SF+RQ P  S+G +  E     D  R   +E E V  E P P+++EP GSG +F+PGTWQPP+
Subjt:  NSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLR-NSNEKEAVQ-EKPIPESSEPVGSGHTFKPGTWQPPT

AT4G26965.2 NADH:ubiquinone oxidoreductase, 17.2kDa subunit

2.3e-43

62.16

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Query:  MKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQD
        MKEKRWV F+ E+DPTSIPVEWICWLNGQRK+APTPEEM ELEARRERV+ NVALLKKEE E+ ++ G  RK I+ G+V GPDL SF+RQ P  S+G + 
Subjt:  MKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQD

Query:  VEGLPTRDSLR-NSNEKEAVQ-EKPIPESSEPVGSGHTFKPGTWQPPT
         E     D  R   +E E V  E P P+++EP GSG +F+PGTWQPP+
Subjt:  VEGLPTRDSLR-NSNEKEAVQ-EKPIPESSEPVGSGHTFKPGTWQPPT

Sequences

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CDS sequence

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ATGTCGAAACTTTTTGGGAAAATTGCTGCTTTCTTCAGCAATAGAACTCTGGTGGGAGTGGACAAAGCGGGAAACAGATACTTCTTCGTAAAAGAAGAAATAGATGGTAT
AATGAAAGAGAAGAGATGGGTGCTATTTAAGGGTGAGGATGATCCAACGTCAATTCCAGTGGAGTGGATATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACCCCAG
AGGAAATGAGGGAGCTAGAAGCTAGGCGTGAACGCGTACGACAAAATGTTGCTCTTCTCAAGAAAGAAGAGATGGAAAGAAACTCTAAAGAAGGCAATTTACGGAAAATC
ATCAGCACCGGTCAAGTTATGGGTCCTGACTTGAAAAGCTTTATCCGACAGGTCCCAACTGGTTCAGAAGGTGCCCAAGATGTGGAAGGATTGCCTACAAGGGATAGCCT
GAGGAACTCAAACGAAAAGGAGGCAGTTCAAGAAAAACCAATTCCCGAGTCCTCCGAGCCTGTTGGGTCTGGCCATACATTTAAACCAGGAACATGGCAGCCACCAACAT
GA

mRNA sequence

Show/hide mRNA sequence

TTTTTTCTACAAAATAAACATCATATTCATACCGTAGGATCTTCGATACAAAATTCGATTCCGACTATTTTAATTCAGGGGACAAGAAGGAAGAAAAATCGAGGGATCTC
CAAATTCAGAGCTTAAACCGAGAGAGAGCACGATCTTAAGGCAAGTCTACAATGGGGAGAGCATAATTTTTCTGGAGTGGAAGAGGAGAAAGAAATTTTGGGATATGAAT
GCTCTGTAATACCCCCATCAAACGGTGGTTGGAACGAAGATAATGTCGAAACTTTTTGGGAAAATTGCTGCTTTCTTCAGCAATAGAACTCTGGTGGGAGTGGACAAAGC
GGGAAACAGATACTTCTTCGTAAAAGAAGAAATAGATGGTATAATGAAAGAGAAGAGATGGGTGCTATTTAAGGGTGAGGATGATCCAACGTCAATTCCAGTGGAGTGGA
TATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACCCCAGAGGAAATGAGGGAGCTAGAAGCTAGGCGTGAACGCGTACGACAAAATGTTGCTCTTCTCAAGAAAGAA
GAGATGGAAAGAAACTCTAAAGAAGGCAATTTACGGAAAATCATCAGCACCGGTCAAGTTATGGGTCCTGACTTGAAAAGCTTTATCCGACAGGTCCCAACTGGTTCAGA
AGGTGCCCAAGATGTGGAAGGATTGCCTACAAGGGATAGCCTGAGGAACTCAAACGAAAAGGAGGCAGTTCAAGAAAAACCAATTCCCGAGTCCTCCGAGCCTGTTGGGT
CTGGCCATACATTTAAACCAGGAACATGGCAGCCACCAACATGAATGGTGATTGCCCTTCAAGGAGAACTCGCGAACATTAAAGCTAGCAGTTCGTTCTATTCCCAACAA
TTGATCCTGCCCTCCGAAGGTCTAAAACAAGATTGTCACTCTGCATTGCCTTGGTTTTCAAATGGTCATATGTAGTATTTGTCTGATGAAAAGCAGTTGTTACTTAAATT
TTATGTAGTAAGTTCAATAAGTATCCTTATAGAATACTTGTGACAGTTTTGACCTCCCCCATTCTATCTAGAGGCTGAGAAAAGTAACTTGCAATTGTCGGTAGCAGCAT
TCCCTTGGAAGATTCACTGTGGGATTGATATCATTCCTGTTGGTTATGATTTGATTTGTAAAACATTTTATCCCAGATTGGTTGGAATTCATTGTAATAATGTTTTCAGG
CTCAGCTTGAGGGATTAATAGTGTTGATGCATTCGATATTTTGTTGTGTGCTCCTGCTACTAACATTTGTGGGGGTATAAGGATAGAAATGGGAAGCCTGAGAACATGAT
GTTAGGGCATAGGAATAGGATTAATGTGTGATTGTTTAGGCCTTTGAGAATGAGAATTTTGGAGATTTTTATTTCATTTGGCTGTCTAGACTATTATATTTTTGTCCTAA
ACTAATTCATTATATAAAGTTTATTTACCCTGTATGATAGGATCGGGGGTTTCGAAGCA

Protein sequence

Show/hide protein sequence

MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKI
ISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQPPT

CSPI03G05130 (gene) of Cucumber (PI 183967) v1 genome