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CSPI03G05600 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G05600
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionSpindle pole body component protein
Genome locationChr3:4740764..4741845
RNA-Seq ExpressionCSPI03G05600
SyntenyCSPI03G05600
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577452.1 hypothetical protein SDJN03_25026, partial [Cucurbita argyrosperma subsp. sororia]7.6e-5281.12Show/hide
Query:  MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRK
        MKFLFEFVSCCVPVNMSR++NPE T A G +EM+SL PITTRKHRRRKR ALLPS AAKLAADWKPSLGAISEDKVVLV+ EREKSD+QT E ERSVKRK
Subjt:  MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRK

Query:  SRSRDGESRGVHGRNNSNDFSLRQSPSAIPVVIPAFSPAPFLF
        S S DGE+RGV+GR+NSNDF  R+SP++IPVVIPAFSP PFLF
Subjt:  SRSRDGESRGVHGRNNSNDFSLRQSPSAIPVVIPAFSPAPFLF

XP_004149939.2 uncharacterized protein LOC101213465 [Cucumis sativus]2.4e-69100Show/hide
Query:  MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRK
        MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRK
Subjt:  MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRK

Query:  SRSRDGESRGVHGRNNSNDFSLRQSPSAIPVVIPAFSPAPFLF
        SRSRDGESRGVHGRNNSNDFSLRQSPSAIPVVIPAFSPAPFLF
Subjt:  SRSRDGESRGVHGRNNSNDFSLRQSPSAIPVVIPAFSPAPFLF

XP_008452335.1 PREDICTED: uncharacterized protein LOC103493394 [Cucumis melo]1.8e-6192.31Show/hide
Query:  MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRK
        MKFLFEFVSCCVPVNMSRI+NPEETEAA SKEMR+L PITTRKHRRRKRSALLPSAAAKLAADWKPSLGAISEDKVVLVVMEREKSD+Q  ELERSVKRK
Subjt:  MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRK

Query:  SRSRDGESRGVHGRNNSNDFSLRQSPSAIPVVIPAFSPAPFLF
        S SRDGESR VHGR NSNDFSLRQ+PSAIPVVIPAFSPAPFLF
Subjt:  SRSRDGESRGVHGRNNSNDFSLRQSPSAIPVVIPAFSPAPFLF

XP_022932132.1 uncharacterized protein LOC111438455 [Cucurbita moschata]1.2e-5281.82Show/hide
Query:  MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRK
        MKFLFEFVSCCVPVNMSR++NPE T A G +EM+SL PITTRKHRRRKR ALLPS AAKLAADWKPSLGAISEDKVVLV+ EREKSD+QT E ERSVKRK
Subjt:  MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRK

Query:  SRSRDGESRGVHGRNNSNDFSLRQSPSAIPVVIPAFSPAPFLF
        S SRDGE+RGV+GR+NSNDF  R+SP++IPVVIPAFSP PFLF
Subjt:  SRSRDGESRGVHGRNNSNDFSLRQSPSAIPVVIPAFSPAPFLF

XP_038905048.1 uncharacterized protein LOC120091204 [Benincasa hispida]1.3e-5989.51Show/hide
Query:  MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRK
        MKFLFEFVSCCVPVNMSRI+NPEETEA G KE+RSL PITTRKHRRRKRSA LPS AAKLA DWKPSLGAISEDKVVLVVMEREKSDEQT E ERSVKRK
Subjt:  MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRK

Query:  SRSRDGESRGVHGRNNSNDFSLRQSPSAIPVVIPAFSPAPFLF
        S SRDGESRGVHGRNNSNDFS+R+SP+AIPVVIPAFSP PFLF
Subjt:  SRSRDGESRGVHGRNNSNDFSLRQSPSAIPVVIPAFSPAPFLF

TrEMBL top hitse value%identityAlignment
A0A0A0L6G1 Uncharacterized protein1.1e-69100Show/hide
Query:  MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRK
        MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRK
Subjt:  MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRK

Query:  SRSRDGESRGVHGRNNSNDFSLRQSPSAIPVVIPAFSPAPFLF
        SRSRDGESRGVHGRNNSNDFSLRQSPSAIPVVIPAFSPAPFLF
Subjt:  SRSRDGESRGVHGRNNSNDFSLRQSPSAIPVVIPAFSPAPFLF

A0A1S3BTM8 uncharacterized protein LOC1034933948.8e-6292.31Show/hide
Query:  MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRK
        MKFLFEFVSCCVPVNMSRI+NPEETEAA SKEMR+L PITTRKHRRRKRSALLPSAAAKLAADWKPSLGAISEDKVVLVVMEREKSD+Q  ELERSVKRK
Subjt:  MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRK

Query:  SRSRDGESRGVHGRNNSNDFSLRQSPSAIPVVIPAFSPAPFLF
        S SRDGESR VHGR NSNDFSLRQ+PSAIPVVIPAFSPAPFLF
Subjt:  SRSRDGESRGVHGRNNSNDFSLRQSPSAIPVVIPAFSPAPFLF

A0A5A7TVI5 Spindle pole body component protein4.8e-5291.41Show/hide
Query:  MSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRKSRSRDGESRGVHGRN
        MSRI+NPEETEAA SKEMR+L PITTRKHRRRKRSALLPSAAAKLAADWKPSLGAISEDKVVLVVMEREKSD+Q  ELERSVKRKS SRDGESR VHGR 
Subjt:  MSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRKSRSRDGESRGVHGRN

Query:  NSNDFSLRQSPSAIPVVIPAFSPAPFLF
        NSNDFSLRQ+PSAIPVVIPAFSPAPFLF
Subjt:  NSNDFSLRQSPSAIPVVIPAFSPAPFLF

A0A6J1EVT0 uncharacterized protein LOC1114384555.7e-5381.82Show/hide
Query:  MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRK
        MKFLFEFVSCCVPVNMSR++NPE T A G +EM+SL PITTRKHRRRKR ALLPS AAKLAADWKPSLGAISEDKVVLV+ EREKSD+QT E ERSVKRK
Subjt:  MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRK

Query:  SRSRDGESRGVHGRNNSNDFSLRQSPSAIPVVIPAFSPAPFLF
        S SRDGE+RGV+GR+NSNDF  R+SP++IPVVIPAFSP PFLF
Subjt:  SRSRDGESRGVHGRNNSNDFSLRQSPSAIPVVIPAFSPAPFLF

A0A6J1JD62 uncharacterized protein LOC1114833131.4e-5180.42Show/hide
Query:  MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRK
        MKFLFEFVSCCVPVNMSR++NPE T A G +EM+SL PI TRKHRRRKR ALLPS AAKLAADWKPSLGAISEDKVVLV+ EREKSD+QT   ERSVKRK
Subjt:  MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRK

Query:  SRSRDGESRGVHGRNNSNDFSLRQSPSAIPVVIPAFSPAPFLF
        S SRDGE+RGV+GR+NSNDF  R+SP++IPVVIPAFSP PFLF
Subjt:  SRSRDGESRGVHGRNNSNDFSLRQSPSAIPVVIPAFSPAPFLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G54585.1 unknown protein3.6e-0734.46Show/hide
Query:  MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRK
        MKFL E V  C      +       + + S E ++L  +  R+ R+R R A  P       A+W+PSL  ISE+K  +  +  EK++E     ++ V+RK
Subjt:  MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRK

Query:  SRSRDG-----ESRGVHGRNNSNDFSLRQSPSAIPVVIPAFSPAPFLF
        S    G      S G H R  S+DF      +A   VIPAFSP PF+F
Subjt:  SRSRDG-----ESRGVHGRNNSNDFSLRQSPSAIPVVIPAFSPAPFLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTCCTTTTTGAGTTCGTTTCTTGCTGCGTGCCGGTCAACATGTCGCGCATAGACAATCCGGAGGAGACAGAGGCGGCAGGCTCCAAGGAGATGAGATCTCTGCC
TCCGATTACCACCAGAAAACACCGGCGGAGAAAACGAAGCGCGTTGTTACCTTCGGCGGCGGCGAAACTAGCCGCCGATTGGAAGCCGTCGCTGGGAGCGATTTCAGAGG
ATAAGGTAGTTCTGGTAGTGATGGAGAGAGAGAAGAGCGATGAGCAGACGACGGAGTTGGAACGATCGGTGAAAAGAAAGAGTAGATCCCGAGACGGAGAAAGCAGAGGA
GTTCACGGCCGTAATAACAGTAACGATTTCAGCCTTAGGCAAAGTCCGTCGGCGATTCCGGTGGTGATCCCGGCGTTTTCTCCGGCTCCGTTCTTGTTCTGA
mRNA sequenceShow/hide mRNA sequence
TGCTACAAATGTAGATACCGGGAATTCAATACCCAACCGTTTCTATAAATTGAGAACCAAGTCCTCTCCACTGAGGGAACTCACCACCGCCACCAATAACCGGAATTCTA
CGACGGAGCACAAAATGGACTCCCCTCCTATCACTCAATGCTTCCCATTCTAAATTTCTCCTACCTTCAACCTCTCGCTTCTTTCCTGGAGTCGGTTCAGTTCAGAGCCC
TCCTTCTCGTTCTGACCACTCTTGAAACTCCCCGGAGCGCTTAACTTTCCAGATGAAATTCCTTTTTGAGTTCGTTTCTTGCTGCGTGCCGGTCAACATGTCGCGCATAG
ACAATCCGGAGGAGACAGAGGCGGCAGGCTCCAAGGAGATGAGATCTCTGCCTCCGATTACCACCAGAAAACACCGGCGGAGAAAACGAAGCGCGTTGTTACCTTCGGCG
GCGGCGAAACTAGCCGCCGATTGGAAGCCGTCGCTGGGAGCGATTTCAGAGGATAAGGTAGTTCTGGTAGTGATGGAGAGAGAGAAGAGCGATGAGCAGACGACGGAGTT
GGAACGATCGGTGAAAAGAAAGAGTAGATCCCGAGACGGAGAAAGCAGAGGAGTTCACGGCCGTAATAACAGTAACGATTTCAGCCTTAGGCAAAGTCCGTCGGCGATTC
CGGTGGTGATCCCGGCGTTTTCTCCGGCTCCGTTCTTGTTCTGATGCAATTTAGGCTTCCTCTTTCCGATCAATCAGGGGTGTTTAGTATATGTAGATATCAATATATGT
TATATGTATATATAGATTTATCGATTAGGATGGTTGAAGTGTAATATTTGTATAATTATTAATCATGATCTGGAAACAGAAAGTTTAGATTATCGAGAAAGAAAACTTTG
TTCATGAAATTTGTAGCTTGTTTGAGTGGTTTCTTTAATGGAAACACTCGTCAAATTAATTGTTCCCATTTTT
Protein sequenceShow/hide protein sequence
MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRKSRSRDGESRG
VHGRNNSNDFSLRQSPSAIPVVIPAFSPAPFLF