; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G05660 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G05660
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionSesquiterpene synthase Tps1
Genome locationChr3:4787218..4790683
RNA-Seq ExpressionCSPI03G05660
SyntenyCSPI03G05660
Gene Ontology termsGO:0016102 - diterpenoid biosynthetic process (biological process)
GO:0000287 - magnesium ion binding (molecular function)
GO:0010333 - terpene synthase activity (molecular function)
InterPro domainsIPR005630 - Terpene synthase, metal-binding domain
IPR008949 - Isoprenoid synthase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650156.1 hypothetical protein Csa_010514 [Cucumis sativus]3.4e-6198.41Show/hide
Query:  MRRVHMVNLLLPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIA
        MRRVHMVNLLLPEYMKVYYRTDLL LFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFI MGDIA
Subjt:  MRRVHMVNLLLPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIA

Query:  TKEVFDWLSDCPKILKASSIICRALT
        TKEVFDWLSDCPKILKASSIICRALT
Subjt:  TKEVFDWLSDCPKILKASSIICRALT

KAE8650158.1 hypothetical protein Csa_009547 [Cucumis sativus]5.8e-4572.34Show/hide
Query:  MVNLLLPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVF
        MVN LLP+YMKV+Y T LL LFEEMDK IVNDGISYRS FAKEAMKRQAESYFKEA WLNKNYKPKY EYMEVAL +SGYELLSTISF+CMGDIATKEVF
Subjt:  MVNLLLPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVF

Query:  DWLSDCPKILKASSIICRAL--------TRDKTSVTAAIRC
        +WL DCPKILKAS+ I R +         +++  + +A+ C
Subjt:  DWLSDCPKILKASSIICRAL--------TRDKTSVTAAIRC

NP_001292628.1 (+)-gamma-cadinene synthase [Cucumis sativus]4.9e-4470.92Show/hide
Query:  MVNLLLPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVF
        MVN LLP+YMKV+Y T LL LFEEMDK IVNDGISYRS F KEAMKRQAESYFKEA WLNKNYKPKY EYMEVAL +SGYELLSTISF+CMGDIATKEVF
Subjt:  MVNLLLPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVF

Query:  DWLSDCPKILKASSIICRAL--------TRDKTSVTAAIRC
        +WL DCP+ILKAS+ I R +         +++  + +A+ C
Subjt:  DWLSDCPKILKASSIICRAL--------TRDKTSVTAAIRC

NP_001315388.1 (+)-gamma-cadinene synthase-like [Cucumis melo]7.6e-4571.63Show/hide
Query:  MVNLLLPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVF
        M+N LLP+YMKVYY T LL LFEE+DKEIVND  SYR  FAKEAMKRQAESYFKEA WLNKNYKPKYEEYMEVAL +SGYELLSTISF+CMGDIATKE+F
Subjt:  MVNLLLPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVF

Query:  DWLSDCPKILKASSIICRAL--------TRDKTSVTAAIRC
        DWL DCPKILKAS+ I R +         +++  V +A+ C
Subjt:  DWLSDCPKILKASSIICRAL--------TRDKTSVTAAIRC

XP_031738839.1 LOW QUALITY PROTEIN: (+)-gamma-cadinene synthase-like [Cucumis sativus]9.2e-5998.36Show/hide
Query:  MVNLLLPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVF
        MVNLLLPEYMKVYYRTDLL LFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFI MGDIATKEVF
Subjt:  MVNLLLPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVF

Query:  DWLSDCPKILKASSIICRALTR
        DWLSDCPKILKASSIICRALTR
Subjt:  DWLSDCPKILKASSIICRALTR

TrEMBL top hitse value%identityAlignment
A0A0A0L337 Uncharacterized protein1.6e-6198.41Show/hide
Query:  MRRVHMVNLLLPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIA
        MRRVHMVNLLLPEYMKVYYRTDLL LFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFI MGDIA
Subjt:  MRRVHMVNLLLPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIA

Query:  TKEVFDWLSDCPKILKASSIICRALT
        TKEVFDWLSDCPKILKASSIICRALT
Subjt:  TKEVFDWLSDCPKILKASSIICRALT

A0A0A0L579 Uncharacterized protein2.8e-4572.34Show/hide
Query:  MVNLLLPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVF
        MVN LLP+YMKV+Y T LL LFEEMDK IVNDGISYRS FAKEAMKRQAESYFKEA WLNKNYKPKY EYMEVAL +SGYELLSTISF+CMGDIATKEVF
Subjt:  MVNLLLPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVF

Query:  DWLSDCPKILKASSIICRAL--------TRDKTSVTAAIRC
        +WL DCPKILKAS+ I R +         +++  + +A+ C
Subjt:  DWLSDCPKILKASSIICRAL--------TRDKTSVTAAIRC

A0A0B4VEV4 Sesquiterpene synthase Tps13.7e-4571.63Show/hide
Query:  MVNLLLPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVF
        M+N LLP+YMKVYY T LL LFEE+DKEIVND  SYR  FAKEAMKRQAESYFKEA WLNKNYKPKYEEYMEVAL +SGYELLSTISF+CMGDIATKE+F
Subjt:  MVNLLLPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVF

Query:  DWLSDCPKILKASSIICRAL--------TRDKTSVTAAIRC
        DWL DCPKILKAS+ I R +         +++  V +A+ C
Subjt:  DWLSDCPKILKASSIICRAL--------TRDKTSVTAAIRC

A0A1S4DZR2 (+)-gamma-cadinene synthase-like2.2e-4571.63Show/hide
Query:  MVNLLLPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVF
        M+N LLP+YMKVYY T LL LFEE+DKEIVND  SYRS FAKEAMKRQAESYFKEA WLNKNYKPKYEEYMEVAL +SGYELLSTISF+CMGDIAT+E+F
Subjt:  MVNLLLPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVF

Query:  DWLSDCPKILKASSIICRAL--------TRDKTSVTAAIRC
        DWL DCPKILKAS+ I R +         +++  V +A+ C
Subjt:  DWLSDCPKILKASSIICRAL--------TRDKTSVTAAIRC

Q66PX8 Beta-caryophyllene synthase2.4e-4470.92Show/hide
Query:  MVNLLLPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVF
        MVN LLP+YMKV+Y T LL LFEEMDK IVNDGISYRS F KEAMKRQAESYFKEA WLNKNYKPKY EYMEVAL +SGYELLSTISF+CMGDIATKEVF
Subjt:  MVNLLLPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVF

Query:  DWLSDCPKILKASSIICRAL--------TRDKTSVTAAIRC
        +WL DCP+ILKAS+ I R +         +++  + +A+ C
Subjt:  DWLSDCPKILKASSIICRAL--------TRDKTSVTAAIRC

SwissProt top hitse value%identityAlignment
B2KSJ5 (+)-gamma-cadinene synthase7.0e-2547.45Show/hide
Query:  LPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGD-IATKEVFDWLS
        LP YMK +Y   +L L+EE+ KEI  D  S     A   +KR +ESYF+EA WLNK YKP ++EYME+AL T+GY +L +ISF+ +GD I T EV  WLS
Subjt:  LPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGD-IATKEVFDWLS

Query:  DCPKILKASSIICRAL--------TRDKTSVTAAIRC
        + P+I+KAS+IICR +         +++  V +A+ C
Subjt:  DCPKILKASSIICRAL--------TRDKTSVTAAIRC

B5A435 Sesquiterpene synthase1.2e-2447.83Show/hide
Query:  LPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVFDWLSD
        LPEYMK  Y++ +L ++ E+++E+ N G  +R  +AKE MK+  E Y  EA W ++ Y P +EEYM VAL TSGY  L+TIS++ MG+IA+KE FDWL  
Subjt:  LPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVFDWLSD

Query:  CPKILKASSIICRAL
         P +++AS  +CR +
Subjt:  CPKILKASSIICRAL

B9SCB6 Probable terpene synthase 21.8e-2853.91Show/hide
Query:  LPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVFDWLSD
        LPEYMKV Y+  LL ++EE+++ +   G SYR  +AKEAMK+  ++Y  EA W+NKNY P  +EYM +AL +  Y LL+  SF+ MGDIATKEVFDW S+
Subjt:  LPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVFDWLSD

Query:  CPKILKASSIICRAL
         PKI++ +SIICR +
Subjt:  CPKILKASSIICRAL

Q6Q3H2 Valencene synthase4.8e-2646.32Show/hide
Query:  LPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVFDWLSD
        LPEYMK+ Y   LL +++E+++E+  +G  YR  +AKE MK Q  +YF EA WL++ + P +EEYM VAL +SGY LL+T SF+ MG+IATKE FDW++ 
Subjt:  LPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVFDWLSD

Query:  CPKILKASSIICRALTRDKT--------SVTAAIRC
         PKI+ +S+ I R +   K+         VT+A+ C
Subjt:  CPKILKASSIICRALTRDKT--------SVTAAIRC

Q6Q3H3 (-)-germacrene D synthase2.8e-2651.3Show/hide
Query:  LPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVFDWLSD
        LPEYM+V Y+  LL ++ E+++E+  +G SYR  +AKEAMK Q  +Y++EA WL     P  EEYM VAL TS Y +L+T SF+ MGD  TKE FDW+  
Subjt:  LPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVFDWLSD

Query:  CPKILKASSIICRAL
         PKI++AS+I+CR +
Subjt:  CPKILKASSIICRAL

Arabidopsis top hitse value%identityAlignment
AT1G70080.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein3.3e-1435.19Show/hide
Query:  LLPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVFDWLS
        +LP+Y+KV +RT    LF+E+++ + ++  S+   +A E ++   + Y +EA W N+ + P +EEY+EV + ++  E+L  ++FI MGD A   V++WL 
Subjt:  LLPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVFDWLS

Query:  DCPKILKA
          PK+  A
Subjt:  DCPKILKA

AT3G14540.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein7.2e-0931.67Show/hide
Query:  VNLLLPEYMKVYYRTDLLVLFE---EMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKE
        +N+   + +  Y R  L  +FE   E+++E+   G SY      E  K  A++Y +   W  K + P ++EYM+V L T+G    +   FI M DI  KE
Subjt:  VNLLLPEYMKVYYRTDLLVLFE---EMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKE

Query:  VFDWLSDCPKILKASSIICR
         F+WL+  P ++ A +++ R
Subjt:  VFDWLSDCPKILKASSIICR

AT5G23960.1 terpene synthase 218.7e-1536.28Show/hide
Query:  LPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVFDWLSD
        +P+ MK  Y    +  ++++D+E+  +G S      K+++++ A  Y +EA WL K+Y   ++EY E A+ +SGY  L  ++F+ M D+A  + F+WLS 
Subjt:  LPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVFDWLSD

Query:  CPKILKASSIICR
         PKI  AS II R
Subjt:  CPKILKASSIICR

AT5G23960.2 terpene synthase 218.7e-1536.28Show/hide
Query:  LPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVFDWLSD
        +P+ MK  Y    +  ++++D+E+  +G S      K+++++ A  Y +EA WL K+Y   ++EY E A+ +SGY  L  ++F+ M D+A  + F+WLS 
Subjt:  LPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVFDWLSD

Query:  CPKILKASSIICR
         PKI  AS II R
Subjt:  CPKILKASSIICR

AT5G48110.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein5.9e-1132.74Show/hide
Query:  LPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVFDWLSD
        +P++MKV  R+ L+ L E+   E+ ++G  Y   +  +  KR   +    + W    Y P Y+EYMEV + T G ++    +FI MG+ A KE FDW+  
Subjt:  LPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVFDWLSD

Query:  CPKILKASSIICR
         PK ++   +  R
Subjt:  CPKILKASSIICR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGACGTGTGCATATGGTCAATCTACTACTTCCGGAGTACATGAAAGTTTATTATAGAACTGATCTGCTTGTTCTTTTTGAAGAGATGGATAAAGAGATAGTCAATGA
TGGAATATCCTATCGCTCTCCCTTTGCAAAAGAAGCTATGAAAAGACAAGCTGAATCCTATTTCAAAGAAGCTGGATGGCTAAACAAAAATTATAAACCAAAATATGAAG
AATACATGGAAGTTGCTTTAACTACATCAGGTTATGAATTACTTTCAACTATTTCATTTATTTGCATGGGTGATATTGCAACAAAGGAAGTATTTGATTGGCTTTCTGAT
TGTCCCAAAATTCTCAAAGCCTCAAGCATCATTTGTAGAGCTCTTACAAGGGATAAAACAAGCGTCACCGCAGCAATACGGTGTCAAGGGCCAGGGATAAAACAAGCTTC
TTATGACAAAAGAATAAATAAGCTGGAGACCAGGGATAAAACAAGCGTCACCGCAGCAATACGGTGTCAAGGGCCAGGGATAAAACAAGCTTCTTATGACAAAAGAATAA
ATAAGCTGGAGACCAGGGATAAAACAAGCGTCACCGCAGCAATACGGTCAACATGGTATCAAGGATCAGGGATAAAACAAGCACCTCATGACAAAAGAATAAATAAGCTG
GAGACCAGGGATAAAACAAGCGTCACCGCAGCAATACGGTGTCAAGAGTCAGAGATAAAACAAGTGCCTCATGACAAAAGAATAAATAAGCTGGAGGTAGAGATAAAAGA
AACGTCACCACAACAACATGGTGTCAAGGGCCAGGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGCGACGTGTGCATATGGTCAATCTACTACTTCCGGAGTACATGAAAGTTTATTATAGAACTGATCTGCTTGTTCTTTTTGAAGAGATGGATAAAGAGATAGTCAATGA
TGGAATATCCTATCGCTCTCCCTTTGCAAAAGAAGCTATGAAAAGACAAGCTGAATCCTATTTCAAAGAAGCTGGATGGCTAAACAAAAATTATAAACCAAAATATGAAG
AATACATGGAAGTTGCTTTAACTACATCAGGTTATGAATTACTTTCAACTATTTCATTTATTTGCATGGGTGATATTGCAACAAAGGAAGTATTTGATTGGCTTTCTGAT
TGTCCCAAAATTCTCAAAGCCTCAAGCATCATTTGTAGAGCTCTTACAAGGGATAAAACAAGCGTCACCGCAGCAATACGGTGTCAAGGGCCAGGGATAAAACAAGCTTC
TTATGACAAAAGAATAAATAAGCTGGAGACCAGGGATAAAACAAGCGTCACCGCAGCAATACGGTGTCAAGGGCCAGGGATAAAACAAGCTTCTTATGACAAAAGAATAA
ATAAGCTGGAGACCAGGGATAAAACAAGCGTCACCGCAGCAATACGGTCAACATGGTATCAAGGATCAGGGATAAAACAAGCACCTCATGACAAAAGAATAAATAAGCTG
GAGACCAGGGATAAAACAAGCGTCACCGCAGCAATACGGTGTCAAGAGTCAGAGATAAAACAAGTGCCTCATGACAAAAGAATAAATAAGCTGGAGGTAGAGATAAAAGA
AACGTCACCACAACAACATGGTGTCAAGGGCCAGGGATAA
Protein sequenceShow/hide protein sequence
MRRVHMVNLLLPEYMKVYYRTDLLVLFEEMDKEIVNDGISYRSPFAKEAMKRQAESYFKEAGWLNKNYKPKYEEYMEVALTTSGYELLSTISFICMGDIATKEVFDWLSD
CPKILKASSIICRALTRDKTSVTAAIRCQGPGIKQASYDKRINKLETRDKTSVTAAIRCQGPGIKQASYDKRINKLETRDKTSVTAAIRSTWYQGSGIKQAPHDKRINKL
ETRDKTSVTAAIRCQESEIKQVPHDKRINKLEVEIKETSPQQHGVKGQG