; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G05860 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G05860
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr3:4980141..4982025
RNA-Seq ExpressionCSPI03G05860
SyntenyCSPI03G05860
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577394.1 Chlorophyll a-b binding protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.5e-3483.65Show/hide
Query:  SYLSAMAKNRN-KKRSGAVSMDVTENSVQELPQAMDVSMSSVHKPASGALDLKLKKGRPMKRTKNVRKTKAIAKAISKSEQSMEKILKNHSKTTRIQSAK
        +YLSAMAKN+N KKRSGA+SMD+TEN+ QELPQAMDVS S+VHKPASGAL+LKLKKGRPMKR+KNVRKT A AKAISK+EQS EKILKN SKTTRI SAK
Subjt:  SYLSAMAKNRN-KKRSGAVSMDVTENSVQELPQAMDVSMSSVHKPASGALDLKLKKGRPMKRTKNVRKTKAIAKAISKSEQSMEKILKNHSKTTRIQSAK

Query:  TLYE
        TLYE
Subjt:  TLYE

XP_004149295.1 uncharacterized protein LOC101207037 [Cucumis sativus]2.2e-41100Show/hide
Query:  MAKNRNKKRSGAVSMDVTENSVQELPQAMDVSMSSVHKPASGALDLKLKKGRPMKRTKNVRKTKAIAKAISKSEQSMEKILKNHSKTTRIQSAKTLYE
        MAKNRNKKRSGAVSMDVTENSVQELPQAMDVSMSSVHKPASGALDLKLKKGRPMKRTKNVRKTKAIAKAISKSEQSMEKILKNHSKTTRIQSAKTLYE
Subjt:  MAKNRNKKRSGAVSMDVTENSVQELPQAMDVSMSSVHKPASGALDLKLKKGRPMKRTKNVRKTKAIAKAISKSEQSMEKILKNHSKTTRIQSAKTLYE

XP_008452291.1 PREDICTED: uncharacterized protein LOC103493362 [Cucumis melo]1.6e-3692.93Show/hide
Query:  MAKNRN-KKRSGAVSMDVTENSVQELPQAMDVSMSSVHKPASGALDLKLKKGRPMKRTKNVRKTKAIAKAISKSEQSMEKILKNHSKTTRIQSAKTLYE
        MAKNRN KKR GAVSMDVTENSV ELPQAMDVS S+VHKPASGALDLKLKKGRPMKR+KNVRKTKAIAKAISKSEQSMEKILKN SKTTRIQSAKTLYE
Subjt:  MAKNRN-KKRSGAVSMDVTENSVQELPQAMDVSMSSVHKPASGALDLKLKKGRPMKRTKNVRKTKAIAKAISKSEQSMEKILKNHSKTTRIQSAKTLYE

XP_022985277.1 uncharacterized protein LOC111483316 [Cucurbita maxima]3.7e-3383.67Show/hide
Query:  MAKNRNKKRSGAVSMDVTENSVQELPQAMDVSMSSVHKPASGALDLKLKKGRPMKRTKNVRKTKAIAKAISKSEQSMEKILKNHSKTTRIQSAKTLYE
        MAKN+NKKRSGA+SMD+TEN+  ELPQAMDVS S+VHKPASGAL+LKLKKGRPMKR+KNVRKT A AKAISK+EQS EKILKN SKTTRI SAKTLYE
Subjt:  MAKNRNKKRSGAVSMDVTENSVQELPQAMDVSMSSVHKPASGALDLKLKKGRPMKRTKNVRKTKAIAKAISKSEQSMEKILKNHSKTTRIQSAKTLYE

XP_038903593.1 uncharacterized protein LOC120090147 [Benincasa hispida]1.1e-3285.86Show/hide
Query:  MAKNRN-KKRSGAVSMDVTENSVQELPQAMDVSMSSVHKPASGALDLKLKKGRPMKRTKNVRKTKAIAKAISKSEQSMEKILKNHSKTTRIQSAKTLYE
        MAKNRN KKRSG VSMDVTEN+V ELPQAMDVS S+VHKP SGAL+LKLKKGRPMKR+KNVRKTKA+AKAISKSEQS EKILKN SKT RIQSAK LYE
Subjt:  MAKNRN-KKRSGAVSMDVTENSVQELPQAMDVSMSSVHKPASGALDLKLKKGRPMKRTKNVRKTKAIAKAISKSEQSMEKILKNHSKTTRIQSAKTLYE

TrEMBL top hitse value%identityAlignment
A0A0A0L355 Uncharacterized protein1.6e-26100Show/hide
Query:  MDVSMSSVHKPASGALDLKLKKGRPMKRTKNVRKTKAIAKAISKSEQSMEKILKNHSKTTRIQSAKTLYE
        MDVSMSSVHKPASGALDLKLKKGRPMKRTKNVRKTKAIAKAISKSEQSMEKILKNHSKTTRIQSAKTLYE
Subjt:  MDVSMSSVHKPASGALDLKLKKGRPMKRTKNVRKTKAIAKAISKSEQSMEKILKNHSKTTRIQSAKTLYE

A0A1S3BUB2 uncharacterized protein LOC1034933627.7e-3792.93Show/hide
Query:  MAKNRN-KKRSGAVSMDVTENSVQELPQAMDVSMSSVHKPASGALDLKLKKGRPMKRTKNVRKTKAIAKAISKSEQSMEKILKNHSKTTRIQSAKTLYE
        MAKNRN KKR GAVSMDVTENSV ELPQAMDVS S+VHKPASGALDLKLKKGRPMKR+KNVRKTKAIAKAISKSEQSMEKILKN SKTTRIQSAKTLYE
Subjt:  MAKNRN-KKRSGAVSMDVTENSVQELPQAMDVSMSSVHKPASGALDLKLKKGRPMKRTKNVRKTKAIAKAISKSEQSMEKILKNHSKTTRIQSAKTLYE

A0A6J1CP23 uncharacterized protein LOC1110127894.4e-2479.27Show/hide
Query:  MDVTENSVQELPQAMDVSMSSVHKPASGALDLKLKKGRPMKRTKNVRKTKAIAKAISKSEQSMEKILKNHSKTTRIQSAKTL
        MD+TEN+V +LPQAMDVS S VHKP SG L+LKL+KGRPMKR++NVRKTKA+AKAI KSEQS EKI+KN SKTTRIQSAKTL
Subjt:  MDVTENSVQELPQAMDVSMSSVHKPASGALDLKLKKGRPMKRTKNVRKTKAIAKAISKSEQSMEKILKNHSKTTRIQSAKTL

A0A6J1EMH0 uncharacterized protein LOC1114358671.2e-3283.84Show/hide
Query:  MAKNRN-KKRSGAVSMDVTENSVQELPQAMDVSMSSVHKPASGALDLKLKKGRPMKRTKNVRKTKAIAKAISKSEQSMEKILKNHSKTTRIQSAKTLYE
        MAKN+N KKRSGA+SMD+TEN+ QELPQAMDVS S+VHKPASGAL+LKLKKGRPMKR+KNVRKT A AKAISK+EQS EKILKN SKTTRI SAKTLYE
Subjt:  MAKNRN-KKRSGAVSMDVTENSVQELPQAMDVSMSSVHKPASGALDLKLKKGRPMKRTKNVRKTKAIAKAISKSEQSMEKILKNHSKTTRIQSAKTLYE

A0A6J1J4F8 uncharacterized protein LOC1114833161.8e-3383.67Show/hide
Query:  MAKNRNKKRSGAVSMDVTENSVQELPQAMDVSMSSVHKPASGALDLKLKKGRPMKRTKNVRKTKAIAKAISKSEQSMEKILKNHSKTTRIQSAKTLYE
        MAKN+NKKRSGA+SMD+TEN+  ELPQAMDVS S+VHKPASGAL+LKLKKGRPMKR+KNVRKT A AKAISK+EQS EKILKN SKTTRI SAKTLYE
Subjt:  MAKNRNKKRSGAVSMDVTENSVQELPQAMDVSMSSVHKPASGALDLKLKKGRPMKRTKNVRKTKAIAKAISKSEQSMEKILKNHSKTTRIQSAKTLYE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G27380.1 unknown protein1.2e-0543.33Show/hide
Query:  AVSMDVTE-NSVQELPQAMDVSMSSVHKPASGALDLKLKKGRP--MKRTKNVRKTKAIAKAISKSEQSMEKILKNHSKTTRIQSAKTLYE
        AV+MD TE   V+   +  D+ +++     +G L L      P  MKRTKN RK KA+AKAI+ SE+   K  K+ +KT R  SAK LYE
Subjt:  AVSMDVTE-NSVQELPQAMDVSMSSVHKPASGALDLKLKKGRP--MKRTKNVRKTKAIAKAISKSEQSMEKILKNHSKTTRIQSAKTLYE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTCCGACCCGATCCGACCCGACCTCACCACTACCCAATACCATCCAACTTTCATGGGCCAACAACACAGCCCAAAAACACAATTCGTCGATCGTCATTCGACTAC
AGTTGGAAGCACAAACTTCTCGCTCTCTTATCTCTCAGCGATGGCGAAGAACAGGAATAAGAAGCGAAGTGGGGCTGTTTCAATGGACGTAACGGAAAATTCCGTTCAAG
AGCTCCCTCAAGCGATGGACGTGTCTATGTCTTCAGTTCATAAACCAGCTTCTGGCGCTCTCGATTTAAAGTTGAAAAAGGGAAGGCCAATGAAGCGAACAAAGAATGTT
AGGAAGACAAAAGCCATCGCGAAGGCCATTTCTAAGAGCGAGCAATCAATGGAGAAAATTTTGAAAAATCATAGCAAAACTACGAGAATACAATCTGCAAAAACATTGTA
TGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACTCCGACCCGATCCGACCCGACCTCACCACTACCCAATACCATCCAACTTTCATGGGCCAACAACACAGCCCAAAAACACAATTCGTCGATCGTCATTCGACTAC
AGTTGGAAGCACAAACTTCTCGCTCTCTTATCTCTCAGCGATGGCGAAGAACAGGAATAAGAAGCGAAGTGGGGCTGTTTCAATGGACGTAACGGAAAATTCCGTTCAAG
AGCTCCCTCAAGCGATGGACGTGTCTATGTCTTCAGTTCATAAACCAGCTTCTGGCGCTCTCGATTTAAAGTTGAAAAAGGGAAGGCCAATGAAGCGAACAAAGAATGTT
AGGAAGACAAAAGCCATCGCGAAGGCCATTTCTAAGAGCGAGCAATCAATGGAGAAAATTTTGAAAAATCATAGCAAAACTACGAGAATACAATCTGCAAAAACATTGTA
TGAATGA
Protein sequenceShow/hide protein sequence
MDSDPIRPDLTTTQYHPTFMGQQHSPKTQFVDRHSTTVGSTNFSLSYLSAMAKNRNKKRSGAVSMDVTENSVQELPQAMDVSMSSVHKPASGALDLKLKKGRPMKRTKNV
RKTKAIAKAISKSEQSMEKILKNHSKTTRIQSAKTLYE