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CSPI03G05900 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G05900
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionHepatitis A virus cellular receptor 1 like
Genome locationChr3:5004107..5006466
RNA-Seq ExpressionCSPI03G05900
SyntenyCSPI03G05900
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046872.1 uncharacterized protein E6C27_scaffold230G00270 [Cucumis melo var. makuwa]1.2e-6388.51Show/hide
Query:  MDDVLGNNRFRYLKDTSQRRDIRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKTEVHKIRQGGLKDTPYSSSLNEKKPEEVKLVVDKMQAEMEEKEGNVNK
        MD VL NNR R LKD SQ RD+R+KI QFLTGVGKFAVDSTIFSSLKAVSGK +VHKIRQGGLKDTP+SSSLNE+KPEEVKLV+DKMQAEMEEKEGN NK
Subjt:  MDDVLGNNRFRYLKDTSQRRDIRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKTEVHKIRQGGLKDTPYSSSLNEKKPEEVKLVVDKMQAEMEEKEGNVNK

Query:  MKQQQHHCTSAEIVDDDSEPLKKKPGEGDKGSANVIQNKKRIFIRSRL
        MKQ+QHHCTSAEIVDDDSEPLKKKPGE DKGSANVIQNKKRIFIRSRL
Subjt:  MKQQQHHCTSAEIVDDDSEPLKKKPGEGDKGSANVIQNKKRIFIRSRL

KAG6577390.1 hypothetical protein SDJN03_24964, partial [Cucurbita argyrosperma subsp. sororia]9.6e-5076.35Show/hide
Query:  MDDVLGNNRFRYLKDTSQRRDIRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKTEVHKIRQGGLKDTPYSSSLNEKKPEEVKLVVDKMQAEMEEKEGNVNK
        MDDV GNNR R LKD    RD+RTKII FL GVGKFAVDSTIF+SLKAVSG  +V+KIRQGGLKD P+S SLNEK+PEE+KLV+DKM AEMEE E N NK
Subjt:  MDDVLGNNRFRYLKDTSQRRDIRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKTEVHKIRQGGLKDTPYSSSLNEKKPEEVKLVVDKMQAEMEEKEGNVNK

Query:  MKQQQHHCTSAEIVDDDSEPLKKKPGEGDKGSANVIQNKKRIFIRSRL
        MK   HHCTSA IV D S PLKK PGEG KGSANV+QNKKRIFIRSRL
Subjt:  MKQQQHHCTSAEIVDDDSEPLKKKPGEGDKGSANVIQNKKRIFIRSRL

XP_004149292.2 uncharacterized protein LOC101206320 [Cucumis sativus]2.4e-6991.72Show/hide
Query:  MDDVLGNNRFRYLKDTSQRRDIRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKTEVHKIRQGGLKDTPYSSSLNEK---------KPEEVKLVVDKMQAEM
        MDDVLGNNRFRYLKDTSQ RDIRTKIIQFLTGVGKFAVDSTIFSSLKAVSGK+EVHKIRQGGLKDTPYSSSLNEK         KPEEVKLV+DKMQAEM
Subjt:  MDDVLGNNRFRYLKDTSQRRDIRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKTEVHKIRQGGLKDTPYSSSLNEK---------KPEEVKLVVDKMQAEM

Query:  EEKEGNVNKMKQQQHHCTSAEIVDDDSEPLKKKPGEGDKGSANVIQNKKRIFIRSRL
        EEKEGNVNKMKQQQHHCTSAEIVDDDSEPLKKK GEGDKGSANVIQNKKRIFIRSRL
Subjt:  EEKEGNVNKMKQQQHHCTSAEIVDDDSEPLKKKPGEGDKGSANVIQNKKRIFIRSRL

XP_008452286.1 PREDICTED: uncharacterized protein LOC103493357 [Cucumis melo]1.2e-6388.51Show/hide
Query:  MDDVLGNNRFRYLKDTSQRRDIRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKTEVHKIRQGGLKDTPYSSSLNEKKPEEVKLVVDKMQAEMEEKEGNVNK
        MD VL NNR R LKD SQ RD+R+KI QFLTGVGKFAVDSTIFSSLKAVSGK +VHKIRQGGLKDTP+SSSLNE+KPEEVKLV+DKMQAEMEEKEGN NK
Subjt:  MDDVLGNNRFRYLKDTSQRRDIRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKTEVHKIRQGGLKDTPYSSSLNEKKPEEVKLVVDKMQAEMEEKEGNVNK

Query:  MKQQQHHCTSAEIVDDDSEPLKKKPGEGDKGSANVIQNKKRIFIRSRL
        MKQ+QHHCTSAEIVDDDSEPLKKKPGE DKGSANVIQNKKRIFIRSRL
Subjt:  MKQQQHHCTSAEIVDDDSEPLKKKPGEGDKGSANVIQNKKRIFIRSRL

XP_038905013.1 uncharacterized protein LOC120091185 [Benincasa hispida]1.4e-5379.73Show/hide
Query:  MDDVLGNNRFRYLKDTSQRRDIRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKTEVHKIRQGGLKDTPYSSSLNEKKPEEVKLVVDKMQAEMEEKEGNVNK
        MDDV+GNNR R L+D    RD+RTKIIQFLTGVGKFAVDST FSSLKAVSGK + HK+  GGLKDTP+SSSLNEKKPEE+KLV+DKMQAEME+ E + NK
Subjt:  MDDVLGNNRFRYLKDTSQRRDIRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKTEVHKIRQGGLKDTPYSSSLNEKKPEEVKLVVDKMQAEMEEKEGNVNK

Query:  MKQQQHHCTSAEIVDDDSEPLKKKPGEGDKGSANVIQNKKRIFIRSRL
        MK  QHHCTSAEIV DDSEPLKK PGEG KGSAN IQNKKRIFIRSRL
Subjt:  MKQQQHHCTSAEIVDDDSEPLKKKPGEGDKGSANVIQNKKRIFIRSRL

TrEMBL top hitse value%identityAlignment
A0A0A0L6J4 Uncharacterized protein1.2e-6991.72Show/hide
Query:  MDDVLGNNRFRYLKDTSQRRDIRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKTEVHKIRQGGLKDTPYSSSLNEK---------KPEEVKLVVDKMQAEM
        MDDVLGNNRFRYLKDTSQ RDIRTKIIQFLTGVGKFAVDSTIFSSLKAVSGK+EVHKIRQGGLKDTPYSSSLNEK         KPEEVKLV+DKMQAEM
Subjt:  MDDVLGNNRFRYLKDTSQRRDIRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKTEVHKIRQGGLKDTPYSSSLNEK---------KPEEVKLVVDKMQAEM

Query:  EEKEGNVNKMKQQQHHCTSAEIVDDDSEPLKKKPGEGDKGSANVIQNKKRIFIRSRL
        EEKEGNVNKMKQQQHHCTSAEIVDDDSEPLKKK GEGDKGSANVIQNKKRIFIRSRL
Subjt:  EEKEGNVNKMKQQQHHCTSAEIVDDDSEPLKKKPGEGDKGSANVIQNKKRIFIRSRL

A0A1S3BUM3 uncharacterized protein LOC1034933575.7e-6488.51Show/hide
Query:  MDDVLGNNRFRYLKDTSQRRDIRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKTEVHKIRQGGLKDTPYSSSLNEKKPEEVKLVVDKMQAEMEEKEGNVNK
        MD VL NNR R LKD SQ RD+R+KI QFLTGVGKFAVDSTIFSSLKAVSGK +VHKIRQGGLKDTP+SSSLNE+KPEEVKLV+DKMQAEMEEKEGN NK
Subjt:  MDDVLGNNRFRYLKDTSQRRDIRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKTEVHKIRQGGLKDTPYSSSLNEKKPEEVKLVVDKMQAEMEEKEGNVNK

Query:  MKQQQHHCTSAEIVDDDSEPLKKKPGEGDKGSANVIQNKKRIFIRSRL
        MKQ+QHHCTSAEIVDDDSEPLKKKPGE DKGSANVIQNKKRIFIRSRL
Subjt:  MKQQQHHCTSAEIVDDDSEPLKKKPGEGDKGSANVIQNKKRIFIRSRL

A0A5D3BVT6 Uncharacterized protein5.7e-6488.51Show/hide
Query:  MDDVLGNNRFRYLKDTSQRRDIRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKTEVHKIRQGGLKDTPYSSSLNEKKPEEVKLVVDKMQAEMEEKEGNVNK
        MD VL NNR R LKD SQ RD+R+KI QFLTGVGKFAVDSTIFSSLKAVSGK +VHKIRQGGLKDTP+SSSLNE+KPEEVKLV+DKMQAEMEEKEGN NK
Subjt:  MDDVLGNNRFRYLKDTSQRRDIRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKTEVHKIRQGGLKDTPYSSSLNEKKPEEVKLVVDKMQAEMEEKEGNVNK

Query:  MKQQQHHCTSAEIVDDDSEPLKKKPGEGDKGSANVIQNKKRIFIRSRL
        MKQ+QHHCTSAEIVDDDSEPLKKKPGE DKGSANVIQNKKRIFIRSRL
Subjt:  MKQQQHHCTSAEIVDDDSEPLKKKPGEGDKGSANVIQNKKRIFIRSRL

A0A6J1CP03 uncharacterized protein LOC1110127751.6e-4272.19Show/hide
Query:  MDDVLGNNRFRYLKDTSQRRDIRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKTEVHK-IRQGGLKDTPYSSSLNEKKPEEVKLVVD-KMQAEMEEKEGNV
        M DV G+ R R LKD     D+R KIIQFLTGVGKFAVDSTIF+SL A +GK +VHK I QGGLKD P+SSSLN+KKPEE+KLV+D KMQAEMEE E   
Subjt:  MDDVLGNNRFRYLKDTSQRRDIRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKTEVHK-IRQGGLKDTPYSSSLNEKKPEEVKLVVD-KMQAEMEEKEGNV

Query:  NKMKQQQHHCTSAEIVDDDSEPLKKKPGEGDKGSANVIQN-KKRIFIRSRL
        NKMK  QHHCTSA IV   SEPLKK PGEG KGSAN +QN KKRIFIRSRL
Subjt:  NKMKQQQHHCTSAEIVDDDSEPLKKKPGEGDKGSANVIQN-KKRIFIRSRL

A0A7N2M8R1 Uncharacterized protein1.0e-2045.64Show/hide
Query:  MDDVLGNNRFRYLKDTSQRRDIRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKTEVHKIRQGGLKDTPYSSSLN-EKKPEEVKLVVDKMQAEMEEKEGNVN
        M D +  +R R LK+ +   D R KI + LT +GKFAVDS +  SLKAV+G  +VH+I Q G K  P S SLN EKK E++KLV++++QA MEE + +++
Subjt:  MDDVLGNNRFRYLKDTSQRRDIRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKTEVHKIRQGGLKDTPYSSSLN-EKKPEEVKLVVDKMQAEMEEKEGNVN

Query:  KMKQQQHHCTSAEIVDDDSEPLKKKPGEGDKGSANVIQNKKRIFIRSRL
        K KQ       +    ++ EP KK P EG+K       +KKR+FIRSRL
Subjt:  KMKQQQHHCTSAEIVDDDSEPLKKKPGEGDKGSANVIQNKKRIFIRSRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGACGTCCTCGGAAACAACCGTTTTCGTTATCTGAAGGATACCTCTCAGCGCCGTGACATTCGGACGAAGATTATCCAATTTCTCACAGGCGTTGGCAAGTTCGC
CGTGGACTCTACCATCTTCAGCTCACTCAAGGCCGTCTCCGGTAAGACTGAGGTGCATAAGATTAGGCAGGGAGGGTTAAAGGATACGCCCTATTCATCATCTTTGAATG
AAAAGAAACCAGAAGAGGTTAAACTAGTGGTGGATAAGATGCAGGCAGAGATGGAGGAAAAAGAGGGAAACGTGAATAAAATGAAGCAACAGCAACACCATTGTACATCT
GCAGAGATTGTTGATGATGACTCTGAACCACTGAAGAAGAAGCCGGGGGAAGGCGACAAAGGATCAGCCAACGTAATTCAAAACAAGAAAAGGATCTTCATCCGTTCCCG
ACTATAG
mRNA sequenceShow/hide mRNA sequence
GGGGGCTCCTAAGGTTTTTCCAATTTAACGTGAAACCGTGCGACGTGGCCAAATTTTGGTACTTGAATCATGAATGGGCAGGCCGAACAGCTACATAATCTTACAACGGA
TCAACGTGAAGACACAATCGGAGCCCACATATTTTGATTCCTTTTGCCGCCGGACGATAACATGGACGACGTCCTCGGAAACAACCGTTTTCGTTATCTGAAGGATACCT
CTCAGCGCCGTGACATTCGGACGAAGATTATCCAATTTCTCACAGGCGTTGGCAAGTTCGCCGTGGACTCTACCATCTTCAGCTCACTCAAGGCCGTCTCCGGTAAGACT
GAGGTGCATAAGATTAGGCAGGGAGGGTTAAAGGATACGCCCTATTCATCATCTTTGAATGAAAAGAAACCAGAAGAGGTTAAACTAGTGGTGGATAAGATGCAGGCAGA
GATGGAGGAAAAAGAGGGAAACGTGAATAAAATGAAGCAACAGCAACACCATTGTACATCTGCAGAGATTGTTGATGATGACTCTGAACCACTGAAGAAGAAGCCGGGGG
AAGGCGACAAAGGATCAGCCAACGTAATTCAAAACAAGAAAAGGATCTTCATCCGTTCCCGACTATAGACACAATCCAGTTCATTATTATTGTATTGTAGCATAATAGTA
AGAATAATGGATTCCTTTCTTGACAGGGTACGTAAGTTGTACTTAGATGGAGACTTTTATTATATTATCATAATTTGTAAAGCTATGCATCCAATATTTTCATGGATGGA
ATTCCTTAGCTTAGCAAGTTGTAAACAAATTCCTCTCTTGTTGGAAACAAAATAGACGTTGATTAATAGCATTTTGTTTTTGGCAGGATTAGTATATTGACTACACGGG
Protein sequenceShow/hide protein sequence
MDDVLGNNRFRYLKDTSQRRDIRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKTEVHKIRQGGLKDTPYSSSLNEKKPEEVKLVVDKMQAEMEEKEGNVNKMKQQQHHCTS
AEIVDDDSEPLKKKPGEGDKGSANVIQNKKRIFIRSRL