CuGenDBv2

Gene ID	CSPI03G06110
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Winged helix-turn-helix DNA-binding domain containing protein
Genome location	Chr3:5257399..5260717
RNA-Seq Expression	CSPI03G06110
Synteny	CSPI03G06110
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0003677 - DNA binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004133703.1 uncharacterized protein LOC101203530 isoform X2 [Cucumis sativus]

5.4e-24

100

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Query:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
        MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
Subjt:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV

XP_008452266.1 PREDICTED: uncharacterized protein LOC103493339 [Cucumis melo]

3.0e-22

93.22

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Query:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
        MGGRGVIGDKWS+RVLW+CALGS IGMYMVAQER+LQNRQRMLTESLKDVESGGNVENV
Subjt:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV

XP_022929341.1 uncharacterized protein LOC111435944 [Cucurbita moschata]

1.1e-19

86.44

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Query:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
        MGGRGVIGDKWS RVLWVCALGS +G+YMVAQERQLQNR RML ESLKDVESGG+ ENV
Subjt:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV

XP_022943152.1 uncharacterized protein LOC111447969 [Cucurbita moschata]

1.1e-19

86.44

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Query:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
        MGGRGVIGDKWS RVLWVCALGS IG+YMV+QERQLQNR+RML ESLKDVESGG+ ENV
Subjt:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV

XP_038903238.1 uncharacterized protein LOC120089884 [Benincasa hispida]

4.7e-20

88.14

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Query:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
        MGGRGVIGDKWS RVLWVCALGS IG+YMVAQERQLQNRQRML ESLKD ESGG+ ENV
Subjt:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L386 Uncharacterized protein

9.4e-91

90.31

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Query:  MILITWHGKSPQVINRKSTLKDMAIFPPTQKLIKSPPFIFTSLNNGVFGVFVSQKPPSPATASPPPHAAVRRRPSYLKRSHRLHRISLPLTLSPLPEIAS
        MILITWHGKSPQVINRKST KDMAIF PTQKLIKSPPFIFTSLNNGVFGVFVSQK PSPATASPPPHAAVRRRPSYLK+SHRLHRISLPLTLSPLPEIA+
Subjt:  MILITWHGKSPQVINRKSTLKDMAIFPPTQKLIKSPPFIFTSLNNGVFGVFVSQKPPSPATASPPPHAAVRRRPSYLKRSHRLHRISLPLTLSPLPEIAS

Query:  FLEYRTNYRGITGVRRAYSSFLNIEESFEIVPNSGKDMGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
         L  R N+        AYSSFL+IEESFEIVPNSGKDMGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
Subjt:  FLEYRTNYRGITGVRRAYSSFLNIEESFEIVPNSGKDMGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV

A0A1S3BUK9 uncharacterized protein LOC103493339

1.4e-22

93.22

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Query:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
        MGGRGVIGDKWS+RVLW+CALGS IGMYMVAQER+LQNRQRMLTESLKDVESGGNVENV
Subjt:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV

A0A6J1CPB9 uncharacterized protein LOC111012874

6.7e-20

86.44

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Query:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
        MGGRGVIGDKWS RVLWVCA+GS IG+YMVAQERQLQNRQRML ESL DVESGG  ENV
Subjt:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV

A0A6J1EMV3 uncharacterized protein LOC111435944

5.1e-20

86.44

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Query:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
        MGGRGVIGDKWS RVLWVCALGS +G+YMVAQERQLQNR RML ESLKDVESGG+ ENV
Subjt:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV

A0A6J1FS83 uncharacterized protein LOC111447969

5.1e-20

86.44

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Query:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
        MGGRGVIGDKWS RVLWVCALGS IG+YMV+QERQLQNR+RML ESLKDVESGG+ ENV
Subjt:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G15395.1 unknown protein

7.5e-16

62.71

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Query:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
        MG RG+I DKWS R+LW CA+GS IG+YMVA ERQ QNR R + ESL+  ES G+ +NV
Subjt:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV

AT3G15395.2 unknown protein

7.5e-16

62.71

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Query:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
        MG RG+I DKWS R+LW CA+GS IG+YMVA ERQ QNR R + ESL+  ES G+ +NV
Subjt:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV

AT3G15395.3 unknown protein

7.5e-16

62.71

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Query:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
        MG RG+I DKWS R+LW CA+GS IG+YMVA ERQ QNR R + ESL+  ES G+ +NV
Subjt:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV

AT3G15395.4 unknown protein

7.5e-16

62.71

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Query:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
        MG RG+I DKWS R+LW CA+GS IG+YMVA ERQ QNR R + ESL+  ES G+ +NV
Subjt:  MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV

Sequences

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CDS sequence

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ATGATCTTGATCACCTGGCATGGGAAATCGCCACAAGTCATCAATAGAAAATCAACTTTAAAAGATATGGCAATTTTTCCTCCAACACAAAAGCTTATCAAGTCGCCTCC
CTTCATCTTCACTTCTCTCAACAATGGTGTTTTTGGTGTTTTTGTTTCGCAAAAGCCTCCCTCCCCAGCTACTGCATCCCCTCCGCCGCACGCAGCAGTCCGCCGCCGCC
CCTCCTACCTGAAACGGTCTCACCGTCTGCACCGCATCTCTCTCCCTCTCACACTCTCACCTCTCCCTGAAATCGCAAGTTTTCTTGAATATAGAACAAACTATCGAGGG
ATAACTGGTGTGAGGAGGGCGTATAGTTCTTTCTTGAATATAGAAGAATCATTTGAAATTGTCCCAAATTCAGGGAAGGATATGGGAGGCAGAGGAGTCATTGGTGACAA
ATGGTCGACGAGGGTTCTCTGGGTTTGTGCTCTAGGAAGTGTAATCGGTATGTATATGGTTGCTCAAGAAAGACAATTACAGAACAGGCAAAGAATGTTGACTGAGAGTC
TTAAAGACGTTGAATCTGGAGGAAATGTTGAAAATGTTTAG

mRNA sequence

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Protein sequence

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MILITWHGKSPQVINRKSTLKDMAIFPPTQKLIKSPPFIFTSLNNGVFGVFVSQKPPSPATASPPPHAAVRRRPSYLKRSHRLHRISLPLTLSPLPEIASFLEYRTNYRG
ITGVRRAYSSFLNIEESFEIVPNSGKDMGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV

CSPI03G06110 (gene) of Cucumber (PI 183967) v1 genome