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CSPI03G06170 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G06170
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRING-type domain-containing protein
Genome locationChr3:5297007..5297573
RNA-Seq ExpressionCSPI03G06170
SyntenyCSPI03G06170
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33914.1 hypothetical protein [Cucumis melo subsp. melo]2.6e-6889.87Show/hide
Query:  MIPQALTVPQSNPPPSILPFLTAFSIVIVIFITIIIFSVVASFAIIVCIYVICKYLIGSTSLDGHSSNLEAGEPNENQMMITRSRILLTHHQTSSHGRDI
        MIPQALTVPQSNPPPSILPFLTAFSIVIVIFI+IIIFSVVASFAII+ IY+ICKYLIGSTSLD H S+LEAGE NENQ MI RSRILLTHHQTSSHGRDI
Subjt:  MIPQALTVPQSNPPPSILPFLTAFSIVIVIFITIIIFSVVASFAIIVCIYVICKYLIGSTSLDGHSSNLEAGEPNENQMMITRSRILLTHHQTSSHGRDI

Query:  MERSESNAWREDMERTIMIEKVAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPV
        MERSESN WRE MERTIMIEKVAAPVSYGSSE   KCIDCAICLEDFENGELCQNFP+
Subjt:  MERSESNAWREDMERTIMIEKVAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPV

KAA0060638.1 putative RING-H2 finger protein ATL19 [Cucumis melo var. makuwa]1.9e-9092.02Show/hide
Query:  MIPQALTVPQSNPPPSILPFLTAFSIVIVIFITIIIFSVVASFAIIVCIYVICKYLIGSTSLDGHSSNLEAGEPNENQMMITRSRILLTHHQTSSHGRDI
        MIPQALTVPQSNPPPSILPFLTAFSIVIVIFI+IIIFSVVASFAII+ IY+ICKYLIGSTSLD H S+LEAGE NENQ MI RSRILLTHHQTSSHGRDI
Subjt:  MIPQALTVPQSNPPPSILPFLTAFSIVIVIFITIIIFSVVASFAIIVCIYVICKYLIGSTSLDGHSSNLEAGEPNENQMMITRSRILLTHHQTSSHGRDI

Query:  MERSESNAWREDMERTIMIEKVAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVND
        MERSESN WRE MERTIMIEKVAAPVSYGSSE   KCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVND
Subjt:  MERSESNAWREDMERTIMIEKVAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVND

KAG6600727.1 putative RING-H2 finger protein ATL19, partial [Cucurbita argyrosperma subsp. sororia]1.2e-5260.41Show/hide
Query:  MIPQAL-TVPQSNPPPSILPFLTAFSIVIVIFITIIIFSVVASFAIIVCIYVICKYLIGSTSLDGHSSNLEAGEPNENQMMITRSRILLTHHQTSSHGRD
        MIPQAL TVPQSNPPPS LPFLTAFSIVIVI I+I+IFS++ASF+II+ I+V+C+YLIGST+LDGH  ++EAGE N+NQ    R             GR 
Subjt:  MIPQAL-TVPQSNPPPSILPFLTAFSIVIVIFITIIIFSVVASFAIIVCIYVICKYLIGSTSLDGHSSNLEAGEPNENQMMITRSRILLTHHQTSSHGRD

Query:  IMERSESNAWREDMERTI---------MIEKVAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVN
        ++ R ESN WRE +ERT+         ++ K+A  V YG SE A K  DCAICLE+FENGE CQ F VC HIFHYSCIQ WL++NMTCPICR  I N
Subjt:  IMERSESNAWREDMERTI---------MIEKVAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVN

TYK02232.1 putative RING-H2 finger protein ATL19 [Cucumis melo var. makuwa]1.2e-6890.51Show/hide
Query:  MIPQALTVPQSNPPPSILPFLTAFSIVIVIFITIIIFSVVASFAIIVCIYVICKYLIGSTSLDGHSSNLEAGEPNENQMMITRSRILLTHHQTSSHGRDI
        MIPQALTVPQSNPPPSILPFLTAFSIVIVIFI+IIIFSVVASFAII+ IY+ICKYLIGSTSLD H S+LEAGE NENQ MI RSRILLTHHQTSSHGRDI
Subjt:  MIPQALTVPQSNPPPSILPFLTAFSIVIVIFITIIIFSVVASFAIIVCIYVICKYLIGSTSLDGHSSNLEAGEPNENQMMITRSRILLTHHQTSSHGRDI

Query:  MERSESNAWREDMERTIMIEKVAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPV
        MERSESN WRE MERTIMIEKVAAPVSYGSSE   KCIDCAICLEDFENGELCQNFPV
Subjt:  MERSESNAWREDMERTIMIEKVAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPV

XP_011652743.1 uncharacterized protein LOC105435076 [Cucumis sativus]6.2e-7864.55Show/hide
Query:  MIPQALTVPQSNPPPSILPFLTAFSIVIVIFITIIIFSVVASFAIIVCIYVICKYLIGSTSLDGHSSNLEAGEPNENQMMITRSRILLTHHQTSSHGRDI
        MIPQALTVPQSNPPPSILPFLTAFSIVIVIFITIIIFSVVASFAIIVCIYVICKYLIGSTSLDGHSSNLEAGEPNENQMMITRSRILLTHHQTSSHGRDI
Subjt:  MIPQALTVPQSNPPPSILPFLTAFSIVIVIFITIIIFSVVASFAIIVCIYVICKYLIGSTSLDGHSSNLEAGEPNENQMMITRSRILLTHHQTSSHGRDI

Query:  MERSESNAWREDMERTIMIEKVAAPVSYGSSEAATKCIDCAICLEDFENGELCQN---------------------------------------------
        MERSESNAWREDMERTIMIEKVAAPVSYGSSEAATKCIDCAICLEDFENGELCQN                                             
Subjt:  MERSESNAWREDMERTIMIEKVAAPVSYGSSEAATKCIDCAICLEDFENGELCQN---------------------------------------------

Query:  --------------------------------------FPVCNHIFHYSCIQHWLKKNMTCPICRCSI
                                              FP C HIFH  CI +WL+ N TCPICR  +
Subjt:  --------------------------------------FPVCNHIFHYSCIQHWLKKNMTCPICRCSI

TrEMBL top hitse value%identityAlignment
A0A0A0L6M6 RING-type domain-containing protein6.2e-100100Show/hide
Query:  MIPQALTVPQSNPPPSILPFLTAFSIVIVIFITIIIFSVVASFAIIVCIYVICKYLIGSTSLDGHSSNLEAGEPNENQMMITRSRILLTHHQTSSHGRDI
        MIPQALTVPQSNPPPSILPFLTAFSIVIVIFITIIIFSVVASFAIIVCIYVICKYLIGSTSLDGHSSNLEAGEPNENQMMITRSRILLTHHQTSSHGRDI
Subjt:  MIPQALTVPQSNPPPSILPFLTAFSIVIVIFITIIIFSVVASFAIIVCIYVICKYLIGSTSLDGHSSNLEAGEPNENQMMITRSRILLTHHQTSSHGRDI

Query:  MERSESNAWREDMERTIMIEKVAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVND
        MERSESNAWREDMERTIMIEKVAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVND
Subjt:  MERSESNAWREDMERTIMIEKVAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVND

A0A5A7UZF7 Putative RING-H2 finger protein ATL199.0e-9192.02Show/hide
Query:  MIPQALTVPQSNPPPSILPFLTAFSIVIVIFITIIIFSVVASFAIIVCIYVICKYLIGSTSLDGHSSNLEAGEPNENQMMITRSRILLTHHQTSSHGRDI
        MIPQALTVPQSNPPPSILPFLTAFSIVIVIFI+IIIFSVVASFAII+ IY+ICKYLIGSTSLD H S+LEAGE NENQ MI RSRILLTHHQTSSHGRDI
Subjt:  MIPQALTVPQSNPPPSILPFLTAFSIVIVIFITIIIFSVVASFAIIVCIYVICKYLIGSTSLDGHSSNLEAGEPNENQMMITRSRILLTHHQTSSHGRDI

Query:  MERSESNAWREDMERTIMIEKVAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVND
        MERSESN WRE MERTIMIEKVAAPVSYGSSE   KCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVND
Subjt:  MERSESNAWREDMERTIMIEKVAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVND

A0A5D3BTV2 Putative RING-H2 finger protein ATL195.7e-6990.51Show/hide
Query:  MIPQALTVPQSNPPPSILPFLTAFSIVIVIFITIIIFSVVASFAIIVCIYVICKYLIGSTSLDGHSSNLEAGEPNENQMMITRSRILLTHHQTSSHGRDI
        MIPQALTVPQSNPPPSILPFLTAFSIVIVIFI+IIIFSVVASFAII+ IY+ICKYLIGSTSLD H S+LEAGE NENQ MI RSRILLTHHQTSSHGRDI
Subjt:  MIPQALTVPQSNPPPSILPFLTAFSIVIVIFITIIIFSVVASFAIIVCIYVICKYLIGSTSLDGHSSNLEAGEPNENQMMITRSRILLTHHQTSSHGRDI

Query:  MERSESNAWREDMERTIMIEKVAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPV
        MERSESN WRE MERTIMIEKVAAPVSYGSSE   KCIDCAICLEDFENGELCQNFPV
Subjt:  MERSESNAWREDMERTIMIEKVAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPV

A0A7N2L6L4 RING-type domain-containing protein6.4e-2038.62Show/hide
Query:  MIPQALTVPQSNPPP--SILPFLTAFSIVIVIFITIIIFSVVASFAIIVCIYVICKYLIGSTSLDGHSSNLEAGEPNENQMM-ITRSRILLTHHQTSSHG
        M+PQA   P   PPP   IL F+    I I+ ++ II+ SVV    I++ I  IC  L    S +    +LE GE   +Q   I  S   + + +  +  
Subjt:  MIPQALTVPQSNPPP--SILPFLTAFSIVIVIFITIIIFSVVASFAIIVCIYVICKYLIGSTSLDGHSSNLEAGEPNENQMM-ITRSRILLTHHQTSSHG

Query:  RDIMERSESNAWREDMERTIMIEKVAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV
        + ++E     + RE  +    +EK+   V+YGS E A+ C  C ICLEDF+NG+ CQ FP CNH+FH +CI +WLKK+ TCPICR  ++
Subjt:  RDIMERSESNAWREDMERTIMIEKVAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV

E5GBS2 Uncharacterized protein1.3e-6889.87Show/hide
Query:  MIPQALTVPQSNPPPSILPFLTAFSIVIVIFITIIIFSVVASFAIIVCIYVICKYLIGSTSLDGHSSNLEAGEPNENQMMITRSRILLTHHQTSSHGRDI
        MIPQALTVPQSNPPPSILPFLTAFSIVIVIFI+IIIFSVVASFAII+ IY+ICKYLIGSTSLD H S+LEAGE NENQ MI RSRILLTHHQTSSHGRDI
Subjt:  MIPQALTVPQSNPPPSILPFLTAFSIVIVIFITIIIFSVVASFAIIVCIYVICKYLIGSTSLDGHSSNLEAGEPNENQMMITRSRILLTHHQTSSHGRDI

Query:  MERSESNAWREDMERTIMIEKVAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPV
        MERSESN WRE MERTIMIEKVAAPVSYGSSE   KCIDCAICLEDFENGELCQNFP+
Subjt:  MERSESNAWREDMERTIMIEKVAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPV

SwissProt top hitse value%identityAlignment
Q67YI6 RING-H2 finger protein ATL652.0e-1044.44Show/hide
Query:  AATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV
        +A  C DCA+CL +FE G+  +  P+C H FH  CI  WL+ +  CP+CR +I+
Subjt:  AATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV

Q8RX29 RING-H2 finger protein ATL703.4e-1044.07Show/hide
Query:  VSYGSSEAATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCS
        + Y  ++  T    CAICL D++   L +  P CNH+FH  CI  WL+ N TCP+CR S
Subjt:  VSYGSSEAATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCS

Q8W571 RING-H2 finger protein ATL322.6e-1042.19Show/hide
Query:  VAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCSI
        V A  S   S+  +K ++CAICL + E+ E  +  P+CNH+FH  CI  WL  + TCP+CR ++
Subjt:  VAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCSI

Q9LZV8 RING-H2 finger protein ATL741.5e-1047.46Show/hide
Query:  YGSSEAATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV
        YGS E      +CAICL +F +GE  +  P CNH FH SCI  WL  + +CP CR S++
Subjt:  YGSSEAATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV

Q9ZV51 RING-H2 finger protein ATL564.4e-1040Show/hide
Query:  KVAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCSI
        K + P +Y   E+     DC +C + F  G+ C+N P C H+FH  C+  WL K  TCPICR  +
Subjt:  KVAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCSI

Arabidopsis top hitse value%identityAlignment
AT2G35910.1 RING/U-box superfamily protein2.4e-1144.07Show/hide
Query:  VSYGSSEAATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCS
        + Y  ++  T    CAICL D++   L +  P CNH+FH  CI  WL+ N TCP+CR S
Subjt:  VSYGSSEAATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCS

AT3G18930.1 RING/U-box superfamily protein1.4e-1144.44Show/hide
Query:  AATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV
        +A  C DCA+CL +FE G+  +  P+C H FH  CI  WL+ +  CP+CR +I+
Subjt:  AATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV

AT3G18930.2 RING/U-box superfamily protein1.4e-1144.44Show/hide
Query:  AATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV
        +A  C DCA+CL +FE G+  +  P+C H FH  CI  WL+ +  CP+CR +I+
Subjt:  AATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV

AT4G40070.1 RING/U-box superfamily protein1.8e-1142.19Show/hide
Query:  VAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCSI
        V A  S   S+  +K ++CAICL + E+ E  +  P+CNH+FH  CI  WL  + TCP+CR ++
Subjt:  VAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCSI

AT5G01880.1 RING/U-box superfamily protein1.1e-1147.46Show/hide
Query:  YGSSEAATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV
        YGS E      +CAICL +F +GE  +  P CNH FH SCI  WL  + +CP CR S++
Subjt:  YGSSEAATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCCTCAAGCTCTTACTGTTCCACAATCCAACCCTCCTCCTTCCATCCTCCCTTTCCTCACCGCGTTCTCGATCGTAATTGTCATCTTCATCACCATCATCATATT
CTCTGTGGTTGCTTCTTTTGCCATCATAGTCTGCATCTATGTCATTTGCAAATACCTAATTGGGTCAACGAGTTTAGATGGCCACAGTTCCAACCTCGAAGCGGGTGAGC
CAAACGAAAACCAAATGATGATCACTAGGAGTAGGATTTTGTTAACTCATCATCAAACGAGTAGTCATGGAAGAGACATCATGGAGAGGTCAGAAAGTAATGCATGGAGG
GAGGACATGGAGAGAACAATAATGATAGAGAAAGTGGCCGCGCCGGTGAGCTATGGGAGCTCGGAGGCGGCGACAAAATGCATTGATTGTGCAATATGTCTGGAGGATTT
TGAAAATGGAGAGCTTTGCCAGAATTTTCCAGTGTGTAATCACATCTTTCATTATTCTTGTATTCAACATTGGTTGAAGAAGAACATGACTTGTCCCATTTGTCGCTGTT
CTATTGTCAATGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCCCTCAAGCTCTTACTGTTCCACAATCCAACCCTCCTCCTTCCATCCTCCCTTTCCTCACCGCGTTCTCGATCGTAATTGTCATCTTCATCACCATCATCATATT
CTCTGTGGTTGCTTCTTTTGCCATCATAGTCTGCATCTATGTCATTTGCAAATACCTAATTGGGTCAACGAGTTTAGATGGCCACAGTTCCAACCTCGAAGCGGGTGAGC
CAAACGAAAACCAAATGATGATCACTAGGAGTAGGATTTTGTTAACTCATCATCAAACGAGTAGTCATGGAAGAGACATCATGGAGAGGTCAGAAAGTAATGCATGGAGG
GAGGACATGGAGAGAACAATAATGATAGAGAAAGTGGCCGCGCCGGTGAGCTATGGGAGCTCGGAGGCGGCGACAAAATGCATTGATTGTGCAATATGTCTGGAGGATTT
TGAAAATGGAGAGCTTTGCCAGAATTTTCCAGTGTGTAATCACATCTTTCATTATTCTTGTATTCAACATTGGTTGAAGAAGAACATGACTTGTCCCATTTGTCGCTGTT
CTATTGTCAATGATTAA
Protein sequenceShow/hide protein sequence
MIPQALTVPQSNPPPSILPFLTAFSIVIVIFITIIIFSVVASFAIIVCIYVICKYLIGSTSLDGHSSNLEAGEPNENQMMITRSRILLTHHQTSSHGRDIMERSESNAWR
EDMERTIMIEKVAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVND