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CSPI03G06660 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G06660
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionFlocculation protein FLO11-like
Genome locationChr3:5870770..5871714
RNA-Seq ExpressionCSPI03G06660
SyntenyCSPI03G06660
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036856.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.6e-0444.59Show/hide
Query:  PTSVSKILHHPSVKRQEV---ITTKAGQ--------------LSFHSEDSVHKWKYVVQRTIADELKISHKHHS
        P+SV   L     K Q++   ITTKAG+              +SFH E+++H+WK+VVQR IADE+ IS KHHS
Subjt:  PTSVSKILHHPSVKRQEV---ITTKAGQ--------------LSFHSEDSVHKWKYVVQRTIADELKISHKHHS

KAA0068080.1 hypothetical protein E6C27_scaffold238G00300 [Cucumis melo var. makuwa]8.5e-0644.55Show/hide
Query:  MAPSDSRSKEQLVPRVGKIV----HVPTASTFVSSHKPSISSQRPTMSFSRVLAQNRVSID--FPPTSNVATPVASTAPPKAHVSNAYGALSSPSCSSNI
        M+ S   + E ++P   K V    HV  ASTFV SHK S + Q PTMS +R+L    VS     PPTS+VA  VA  AP    +S+A G   SPSC SN+
Subjt:  MAPSDSRSKEQLVPRVGKIV----HVPTASTFVSSHKPSISSQRPTMSFSRVLAQNRVSID--FPPTSNVATPVASTAPPKAHVSNAYGALSSPSCSSNI

Query:  ESPTVDPPVD
        ES  +D   D
Subjt:  ESPTVDPPVD

KGN56296.1 hypothetical protein Csa_011479 [Cucumis sativus]1.8e-4888.52Show/hide
Query:  MAPSDSRSKEQLVPRVGKIVHVPTASTFVSSHKPSISSQRPTMSFSRVLAQNRVSIDFPPTSNVATPVASTAPPKAHVSNAYGALSSPSCSSNIESPTVD
        M PSDSRSKEQLVPRVGKIVHVPTASTFVSSHKPSISSQRPTMSFSRVLAQN VS DFPPTSNVATP+ASTAPPKAHVSNAYGALSSPSCSSNIESPTVD
Subjt:  MAPSDSRSKEQLVPRVGKIVHVPTASTFVSSHKPSISSQRPTMSFSRVLAQNRVSIDFPPTSNVATPVASTAPPKAHVSNAYGALSSPSCSSNIESPTVD

Query:  PPVDATADDFFYASESFFGTNF
         PVDAT DDFF     F G  F
Subjt:  PPVDATADDFFYASESFFGTNF

TYK07239.1 flocculation protein FLO11-like [Cucumis melo var. makuwa]1.6e-0440Show/hide
Query:  EPVSSFAPPYVP---TSVSKILHHPSVKRQEVITTKAG--------------QLSFHSEDSVHKWKYVVQRTIADELKISHKHHS
        E  S F+ P  P    + S   H P    Q VI+TKAG              ++SFHSE+  HKWKYVV+R IADE  I+ +++S
Subjt:  EPVSSFAPPYVP---TSVSKILHHPSVKRQEVITTKAG--------------QLSFHSEDSVHKWKYVVQRTIADELKISHKHHS

TYK27163.1 cell wall protein RBR3-like [Cucumis melo var. makuwa]9.4e-0552.63Show/hide
Query:  RQEVITTKAGQ--------------LSFHSEDSVHKWKYVVQRTIADELKISHKHHS
        R +VITTK G               +SFH E+SVH+WKYVVQR  ADE+ IS KHHS
Subjt:  RQEVITTKAGQ--------------LSFHSEDSVHKWKYVVQRTIADELKISHKHHS

TrEMBL top hitse value%identityAlignment
A0A0A0L853 Uncharacterized protein8.8e-4988.52Show/hide
Query:  MAPSDSRSKEQLVPRVGKIVHVPTASTFVSSHKPSISSQRPTMSFSRVLAQNRVSIDFPPTSNVATPVASTAPPKAHVSNAYGALSSPSCSSNIESPTVD
        M PSDSRSKEQLVPRVGKIVHVPTASTFVSSHKPSISSQRPTMSFSRVLAQN VS DFPPTSNVATP+ASTAPPKAHVSNAYGALSSPSCSSNIESPTVD
Subjt:  MAPSDSRSKEQLVPRVGKIVHVPTASTFVSSHKPSISSQRPTMSFSRVLAQNRVSIDFPPTSNVATPVASTAPPKAHVSNAYGALSSPSCSSNIESPTVD

Query:  PPVDATADDFFYASESFFGTNF
         PVDAT DDFF     F G  F
Subjt:  PPVDATADDFFYASESFFGTNF

A0A5D3B7L1 Gag-pol polyprotein7.8e-0544.59Show/hide
Query:  PTSVSKILHHPSVKRQEV---ITTKAGQ--------------LSFHSEDSVHKWKYVVQRTIADELKISHKHHS
        P+SV   L     K Q++   ITTKAG+              +SFH E+++H+WK+VVQR IADE+ IS KHHS
Subjt:  PTSVSKILHHPSVKRQEV---ITTKAGQ--------------LSFHSEDSVHKWKYVVQRTIADELKISHKHHS

A0A5D3CAA3 Flocculation protein FLO11-like7.8e-0540Show/hide
Query:  EPVSSFAPPYVP---TSVSKILHHPSVKRQEVITTKAG--------------QLSFHSEDSVHKWKYVVQRTIADELKISHKHHS
        E  S F+ P  P    + S   H P    Q VI+TKAG              ++SFHSE+  HKWKYVV+R IADE  I+ +++S
Subjt:  EPVSSFAPPYVP---TSVSKILHHPSVKRQEVITTKAG--------------QLSFHSEDSVHKWKYVVQRTIADELKISHKHHS

A0A5D3DR51 Uncharacterized protein4.1e-0644.55Show/hide
Query:  MAPSDSRSKEQLVPRVGKIV----HVPTASTFVSSHKPSISSQRPTMSFSRVLAQNRVSID--FPPTSNVATPVASTAPPKAHVSNAYGALSSPSCSSNI
        M+ S   + E ++P   K V    HV  ASTFV SHK S + Q PTMS +R+L    VS     PPTS+VA  VA  AP    +S+A G   SPSC SN+
Subjt:  MAPSDSRSKEQLVPRVGKIV----HVPTASTFVSSHKPSISSQRPTMSFSRVLAQNRVSID--FPPTSNVATPVASTAPPKAHVSNAYGALSSPSCSSNI

Query:  ESPTVDPPVD
        ES  +D   D
Subjt:  ESPTVDPPVD

A0A5D3DU39 Cell wall protein RBR3-like4.6e-0552.63Show/hide
Query:  RQEVITTKAGQ--------------LSFHSEDSVHKWKYVVQRTIADELKISHKHHS
        R +VITTK G               +SFH E+SVH+WKYVVQR  ADE+ IS KHHS
Subjt:  RQEVITTKAGQ--------------LSFHSEDSVHKWKYVVQRTIADELKISHKHHS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCTTCTGATTCTAGGTCTAAAGAGCAACTTGTTCCTCGTGTTGGCAAGATTGTTCATGTTCCTACTGCTTCTACATTTGTCTCTTCTCACAAACCTTCCATCTC
GTCTCAACGACCTACGATGAGTTTTTCTAGGGTTCTTGCCCAAAATCGGGTTTCTATTGATTTTCCTCCTACTTCAAATGTTGCTACTCCTGTTGCATCTACTGCCCCTC
CCAAGGCTCATGTGTCTAATGCTTATGGTGCTTTGAGTTCTCCTTCTTGTTCTTCAAATATTGAGTCTCCTACAGTTGACCCTCCAGTTGATGCAACCGCTGACGATTTT
TTTTATGCCTCTGAGTCTTTTTTTGGGACTAATTTTCACCATGCCTCATCTACTTCTAATGTTTATGATCTTGTTGGTTCTTCTTCTTCCTCTCCACTTGCTACAACTTT
TGTACTTGCTTTTGCCTATGATGTCCCTACATTGCATCTGGTGTTCCTACACCTGCTTCTACTGTTGCTCCTGTTGGTACAACGTCTGGCACTTCTACCACCGCTTCTAG
TCAATGAGCCTGTCTCATCGTTTGCTCCTCCATATGTACCCACTTCTGTTTCAAAAATTCTCCATCATCCTTCTGTCAAAAGGCAAGAGGTGATCACTACTAAGGCTGGA
CAACTCTCATTTCATTCAGAAGATAGTGTGCATAAGTGGAAGTACGTGGTTCAACGTACAATTGCTGATGAGTTGAAAATCTCTCATAAGCATCACTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCTTCTGATTCTAGGTCTAAAGAGCAACTTGTTCCTCGTGTTGGCAAGATTGTTCATGTTCCTACTGCTTCTACATTTGTCTCTTCTCACAAACCTTCCATCTC
GTCTCAACGACCTACGATGAGTTTTTCTAGGGTTCTTGCCCAAAATCGGGTTTCTATTGATTTTCCTCCTACTTCAAATGTTGCTACTCCTGTTGCATCTACTGCCCCTC
CCAAGGCTCATGTGTCTAATGCTTATGGTGCTTTGAGTTCTCCTTCTTGTTCTTCAAATATTGAGTCTCCTACAGTTGACCCTCCAGTTGATGCAACCGCTGACGATTTT
TTTTATGCCTCTGAGTCTTTTTTTGGGACTAATTTTCACCATGCCTCATCTACTTCTAATGTTTATGATCTTGTTGGTTCTTCTTCTTCCTCTCCACTTGCTACAACTTT
TGTACTTGCTTTTGCCTATGATGTCCCTACATTGCATCTGGTGTTCCTACACCTGCTTCTACTGTTGCTCCTGTTGGTACAACGTCTGGCACTTCTACCACCGCTTCTAG
TCAATGAGCCTGTCTCATCGTTTGCTCCTCCATATGTACCCACTTCTGTTTCAAAAATTCTCCATCATCCTTCTGTCAAAAGGCAAGAGGTGATCACTACTAAGGCTGGA
CAACTCTCATTTCATTCAGAAGATAGTGTGCATAAGTGGAAGTACGTGGTTCAACGTACAATTGCTGATGAGTTGAAAATCTCTCATAAGCATCACTCATGA
Protein sequenceShow/hide protein sequence
MAPSDSRSKEQLVPRVGKIVHVPTASTFVSSHKPSISSQRPTMSFSRVLAQNRVSIDFPPTSNVATPVASTAPPKAHVSNAYGALSSPSCSSNIESPTVDPPVDATADDF
FYASESFFGTNFHHASSTSNVYDLVGSSSSSPLATTFVLAFAYDVPTLHLVFLHLLLLLLLLVQRLALLPPLLVNEPVSSFAPPYVPTSVSKILHHPSVKRQEVITTKAG
QLSFHSEDSVHKWKYVVQRTIADELKISHKHHS