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CSPI03G07070 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G07070
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionEthylene-responsive transcription factor
Genome locationChr3:6310685..6311158
RNA-Seq ExpressionCSPI03G07070
SyntenyCSPI03G07070
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily
IPR044808 - Ethylene-responsive transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048804.1 putative Ethylene-responsive element binding factor 13 [Cucumis melo var. makuwa]1.9e-7295.45Show/hide
Query:  SSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMS-NNNNNMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWGK
        SSSSSSLEGSSSDLF LEQIRRHLLEDDLGKGST+NNVEDGIIRYDIS SGAGWEMS NNNNNMVDQMSSIIIRDNPEEKS  RPRGLQFRGVRRRPWGK
Subjt:  SSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMS-NNNNNMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWGK

Query:  YAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN
        YAAEIRDPS+KGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN
Subjt:  YAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN

KAE8650208.1 hypothetical protein Csa_010866 [Cucumis sativus]2.2e-6081.53Show/hide
Query:  MLSSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMSNNNNNMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWG
        MLSSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDG                             IIRDNPEEKSQPRPRGLQFRGVRRRPWG
Subjt:  MLSSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMSNNNNNMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWG

Query:  KYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS
        KYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS
Subjt:  KYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS

XP_004134277.2 ethylene-responsive transcription factor 1 [Cucumis sativus]2.7e-82100Show/hide
Query:  MLSSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMSNNNNNMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWG
        MLSSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMSNNNNNMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWG
Subjt:  MLSSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMSNNNNNMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWG

Query:  KYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS
        KYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS
Subjt:  KYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS

XP_022950239.1 ethylene-responsive transcription factor 1-like [Cucurbita moschata]7.4e-3256.6Show/hide
Query:  MLSSSSSSLEGSSSDLFHLEQIRRHLLEDD------LGKGSTHNNVEDGIIRYDISRSGAGWEMSNNNNNMVDQMSSIIIRDNPEEKSQPRPRGLQFRGV
        M S+S+ S   SSS++F LE IRRHLLED+      LGK +      DG+   DI   G G              SSI              RGLQFRGV
Subjt:  MLSSSSSSLEGSSSDLFHLEQIRRHLLEDD------LGKGSTHNNVEDGIIRYDISRSGAGWEMSNNNNNMVDQMSSIIIRDNPEEKSQPRPRGLQFRGV

Query:  RRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS
        RRRPWGKYAAEIRDP++KGARIWLGTY TA++AALAYDRAAFQMRGAKAKLNFPH+I S
Subjt:  RRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS

XP_022974259.1 ethylene-responsive transcription factor 13-like [Cucurbita maxima]5.6e-3256.69Show/hide
Query:  MLSSSSSSLEGSSSDLFHLEQIRRHLLEDDL----GKGSTHNNVEDGIIRYDISRSGAGWEMSNNNNNMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRR
        M S+S+ S   SSS++F LE IRRHLLED+L    G G    +++ G    DI   G G              SSI              RGLQFRGVRR
Subjt:  MLSSSSSSLEGSSSDLFHLEQIRRHLLEDDL----GKGSTHNNVEDGIIRYDISRSGAGWEMSNNNNNMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRR

Query:  RPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS
        RPWGKYAAEIRDP++KGARIWLGTY TA++AALAYDRAAFQMRGAKAKLNFPH+I S
Subjt:  RPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS

TrEMBL top hitse value%identityAlignment
A0A0A0L893 AP2/ERF domain-containing protein1.3e-82100Show/hide
Query:  MLSSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMSNNNNNMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWG
        MLSSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMSNNNNNMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWG
Subjt:  MLSSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMSNNNNNMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWG

Query:  KYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS
        KYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS
Subjt:  KYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS

A0A5D3DAY8 Putative Ethylene-responsive element binding factor 139.3e-7395.45Show/hide
Query:  SSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMS-NNNNNMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWGK
        SSSSSSLEGSSSDLF LEQIRRHLLEDDLGKGST+NNVEDGIIRYDIS SGAGWEMS NNNNNMVDQMSSIIIRDNPEEKS  RPRGLQFRGVRRRPWGK
Subjt:  SSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMS-NNNNNMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWGK

Query:  YAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN
        YAAEIRDPS+KGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN
Subjt:  YAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN

A0A6J1A158 ethylene-responsive transcription factor 13-like7.0e-2858.41Show/hide
Query:  SGAGWEMSNNNNN----MVDQMSSIIIRDNPEEKSQPR------PRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGA
        + +GW  SN  +N     ++++ S   R+  +E+S+ +      PRG+ F+GVRRRPWGKYAAEIRDP + GARIWLGTY T +DAALAYDRAAF+MRGA
Subjt:  SGAGWEMSNNNNN----MVDQMSSIIIRDNPEEKSQPR------PRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGA

Query:  KAKLNFPHIISSN
        KAKLNFPH+I SN
Subjt:  KAKLNFPHIISSN

A0A6J1GF81 ethylene-responsive transcription factor 1-like3.6e-3256.6Show/hide
Query:  MLSSSSSSLEGSSSDLFHLEQIRRHLLEDD------LGKGSTHNNVEDGIIRYDISRSGAGWEMSNNNNNMVDQMSSIIIRDNPEEKSQPRPRGLQFRGV
        M S+S+ S   SSS++F LE IRRHLLED+      LGK +      DG+   DI   G G              SSI              RGLQFRGV
Subjt:  MLSSSSSSLEGSSSDLFHLEQIRRHLLEDD------LGKGSTHNNVEDGIIRYDISRSGAGWEMSNNNNNMVDQMSSIIIRDNPEEKSQPRPRGLQFRGV

Query:  RRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS
        RRRPWGKYAAEIRDP++KGARIWLGTY TA++AALAYDRAAFQMRGAKAKLNFPH+I S
Subjt:  RRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS

A0A6J1IH30 ethylene-responsive transcription factor 13-like2.7e-3256.69Show/hide
Query:  MLSSSSSSLEGSSSDLFHLEQIRRHLLEDDL----GKGSTHNNVEDGIIRYDISRSGAGWEMSNNNNNMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRR
        M S+S+ S   SSS++F LE IRRHLLED+L    G G    +++ G    DI   G G              SSI              RGLQFRGVRR
Subjt:  MLSSSSSSLEGSSSDLFHLEQIRRHLLEDDL----GKGSTHNNVEDGIIRYDISRSGAGWEMSNNNNNMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRR

Query:  RPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS
        RPWGKYAAEIRDP++KGARIWLGTY TA++AALAYDRAAFQMRGAKAKLNFPH+I S
Subjt:  RPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS

SwissProt top hitse value%identityAlignment
Q40476 Ethylene-responsive transcription factor 15.9e-2454.29Show/hide
Query:  GWEMSNNNNNMV--DQMSSIIIRDNPEEKSQPR---PRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPH
        GW   N +   V  +Q    I+    E  + P    PRG  +RGVRRRPWGK+AAEIRDP+K GAR+WLGTY T ++AA+AYD+AA++MRG+KA LNFPH
Subjt:  GWEMSNNNNNMV--DQMSSIIIRDNPEEKSQPR---PRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPH

Query:  IISSN
         I  N
Subjt:  IISSN

Q40479 Ethylene-responsive transcription factor 22.6e-2471.01Show/hide
Query:  PRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN
        P+G  +RGVR+RPWGK+AAEIRDP+K GAR+WLGTY TA++AALAYD+AA++MRG+KA LNFPH I  N
Subjt:  PRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN

Q84XB3 Ethylene-responsive transcription factor 12.9e-2368.57Show/hide
Query:  RPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN
        +P+G  +RGVR+RPWGK+AAEIRDP+K GAR+WLGTY +A++AALAY +AAF+MRG KA LNFPH I  N
Subjt:  RPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN

Q8L9K1 Ethylene-responsive transcription factor 133.0e-2875.34Show/hide
Query:  PRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNY
        PR +G+Q+RGVRRRPWGK+AAEIRDP K GAR+WLGTY T +DAA+AYDRAAFQ+RG+KAKLNFPH+I S  Y
Subjt:  PRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNY

Q9LW50 Ethylene-responsive transcription factor 22.6e-2471.01Show/hide
Query:  PRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN
        P+G  +RGVR+RPWGK+AAEIRDP+K GAR+WLGTY TA++AALAYD+AA++MRG+KA LNFPH I  N
Subjt:  PRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN

Arabidopsis top hitse value%identityAlignment
AT2G33710.1 Integrase-type DNA-binding superfamily protein3.3e-2261.36Show/hide
Query:  DQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN
        DQ SS+ +    +EKS  R R   +RGVR+RPWGK+AAEIRDP+ K AR+WLGT+ TA++AALAYD+AAF+ RG KAKLNFP  I  N
Subjt:  DQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN

AT2G33710.2 Integrase-type DNA-binding superfamily protein3.3e-2261.36Show/hide
Query:  DQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN
        DQ SS+ +    +EKS  R R   +RGVR+RPWGK+AAEIRDP+ K AR+WLGT+ TA++AALAYD+AAF+ RG KAKLNFP  I  N
Subjt:  DQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN

AT2G44840.1 ethylene-responsive element binding factor 132.1e-2975.34Show/hide
Query:  PRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNY
        PR +G+Q+RGVRRRPWGK+AAEIRDP K GAR+WLGTY T +DAA+AYDRAAFQ+RG+KAKLNFPH+I S  Y
Subjt:  PRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNY

AT4G17500.1 ethylene responsive element binding factor 11.8e-2360.76Show/hide
Query:  RDNPEEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS
        + +P   +    +G  +RGVR+RPWGK+AAEIRDP+K GAR+WLGT+ TA+DAALAYDRAAF+MRG++A LNFP  ++S
Subjt:  RDNPEEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS

AT5G47220.1 ethylene responsive element binding factor 24.3e-2271.43Show/hide
Query:  FRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS
        +RGVR+RPWGK+AAEIRDP+K GAR+WLGT+ TA+DAALAYD AAF+MRG++A LNFP  ++S
Subjt:  FRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAGCAGCAGCAGCAGCAGCTTGGAAGGGTCGTCGTCGGATTTATTTCATTTGGAGCAGATTCGGCGGCATCTTCTAGAAGATGACTTAGGGAAAGGGAGTACTCA
TAATAATGTTGAGGATGGAATAATCAGGTATGATATTAGTAGGAGTGGAGCTGGTTGGGAGATGAGTAATAACAACAACAATATGGTGGATCAAATGTCTTCAATTATTA
TTAGAGACAATCCGGAGGAGAAGTCTCAGCCTCGGCCTCGAGGTTTGCAGTTCAGAGGAGTGAGGAGGAGGCCTTGGGGGAAGTACGCGGCAGAAATCAGAGACCCGAGC
AAAAAAGGAGCTCGAATATGGCTGGGAACTTACCACACCGCCCAAGACGCTGCTTTAGCTTACGATCGAGCTGCTTTTCAGATGCGAGGGGCCAAAGCAAAACTCAACTT
CCCTCACATCATTTCTTCTAACAACTACTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAGCAGCAGCAGCAGCAGCTTGGAAGGGTCGTCGTCGGATTTATTTCATTTGGAGCAGATTCGGCGGCATCTTCTAGAAGATGACTTAGGGAAAGGGAGTACTCA
TAATAATGTTGAGGATGGAATAATCAGGTATGATATTAGTAGGAGTGGAGCTGGTTGGGAGATGAGTAATAACAACAACAATATGGTGGATCAAATGTCTTCAATTATTA
TTAGAGACAATCCGGAGGAGAAGTCTCAGCCTCGGCCTCGAGGTTTGCAGTTCAGAGGAGTGAGGAGGAGGCCTTGGGGGAAGTACGCGGCAGAAATCAGAGACCCGAGC
AAAAAAGGAGCTCGAATATGGCTGGGAACTTACCACACCGCCCAAGACGCTGCTTTAGCTTACGATCGAGCTGCTTTTCAGATGCGAGGGGCCAAAGCAAAACTCAACTT
CCCTCACATCATTTCTTCTAACAACTACTCATGA
Protein sequenceShow/hide protein sequence
MLSSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMSNNNNNMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPS
KKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS