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CSPI03G07280 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G07280
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionProtein transport protein Sec61 subunit beta
Genome locationChr3:6461651..6461899
RNA-Seq ExpressionCSPI03G07280
SyntenyCSPI03G07280
Gene Ontology termsGO:0006616 - SRP-dependent cotranslational protein targeting to membrane, translocation (biological process)
GO:0031204 - posttranslational protein targeting to membrane, translocation (biological process)
GO:0005784 - Sec61 translocon complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR016482 - Protein transport protein SecG/Sec61-beta/Sbh
IPR030671 - Protein transport Sec61-beta/Sbh


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008437786.1 PREDICTED: protein transport protein Sec61 subunit beta [Cucumis melo]8.6e-3298.78Show/hide
Query:  MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA
        MAL GGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA
Subjt:  MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA

XP_011650635.1 protein transport protein Sec61 subunit beta [Cucumis sativus]1.2e-33100Show/hide
Query:  MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA
        MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA
Subjt:  MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA

XP_022146520.1 protein transport protein Sec61 subunit beta-like [Momordica charantia]3.9e-3296.34Show/hide
Query:  MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA
        MALGG  PQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHVMGKLYFVRREA
Subjt:  MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA

XP_022950482.1 protein transport protein Sec61 subunit beta-like [Cucurbita moschata]7.8e-3397.56Show/hide
Query:  MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA
        MALGGG PQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHVMGKLYFVRREA
Subjt:  MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA

XP_038875187.1 protein transport protein Sec61 subunit beta-like isoform X1 [Benincasa hispida]3.9e-3296.34Show/hide
Query:  MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA
        MALGG  PQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHVMGKLYFVRREA
Subjt:  MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA

TrEMBL top hitse value%identityAlignment
A0A0A0L6Y8 Protein transport protein Sec61 subunit beta5.8e-34100Show/hide
Query:  MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA
        MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA
Subjt:  MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA

A0A6J1EFZ9 Protein transport protein Sec61 subunit beta1.9e-3296.34Show/hide
Query:  MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA
        MALGG  PQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHVMGKLYFVRREA
Subjt:  MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA

A0A6J1GEY3 Protein transport protein Sec61 subunit beta3.8e-3397.56Show/hide
Query:  MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA
        MALGGG PQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHVMGKLYFVRREA
Subjt:  MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA

A0A6J1IH25 Protein transport protein Sec61 subunit beta3.8e-3397.56Show/hide
Query:  MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA
        MALGGG PQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHVMGKLYFVRREA
Subjt:  MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA

A0A6J1J088 Protein transport protein Sec61 subunit beta1.9e-3296.34Show/hide
Query:  MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA
        MALGG  PQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHVMGKLYFVRREA
Subjt:  MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA

SwissProt top hitse value%identityAlignment
A8I6P9 Protein transport protein Sec61 subunit beta1.8e-0847.37Show/hide
Query:  MALGGGGPQRGSAAATASMRRRRTTSSGTSG--GAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGK
        +A GG         A  ++RRR    SG SG   A    + FYTDD PG K+SP VV+ MS+ FIAFV +LHV+GK
Subjt:  MALGGGGPQRGSAAATASMRRRRTTSSGTSG--GAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGK

P38389 Protein transport protein Sec61 subunit beta3.0e-2782.72Show/hide
Query:  LGGGGPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR
        +G G PQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVMGKLYFV+
Subjt:  LGGGGPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR

P60467 Protein transport protein Sec61 subunit beta6.5e-0643.59Show/hide
Query:  GGGPQRGSA--AATASMRRRRTTSSG------TSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGK
        G  P +  A  AA +++R+R+  S G      T+    G M +FYT+D+PGLK+ P  VLVMS+ FIA V +LH+ GK
Subjt:  GGGPQRGSA--AATASMRRRRTTSSG------TSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGK

P60468 Protein transport protein Sec61 subunit beta6.5e-0643.59Show/hide
Query:  GGGPQRGSA--AATASMRRRRTTSSG------TSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGK
        G  P +  A  AA +++R+R+  S G      T+    G M +FYT+D+PGLK+ P  VLVMS+ FIA V +LH+ GK
Subjt:  GGGPQRGSA--AATASMRRRRTTSSG------TSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGK

Q9HFC7 Protein transport protein Sec61 subunit beta4.5e-0749.18Show/hide
Query:  ATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKL
        A AS R   T S G +GG++ TML+ YTD++ GLK+ P VV+V+S+GFI  V  LH++ K+
Subjt:  ATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKL

Arabidopsis top hitse value%identityAlignment
AT2G45070.1 Preprotein translocase Sec, Sec61-beta subunit protein2.1e-2882.72Show/hide
Query:  LGGGGPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR
        +G G PQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVMGKLYFV+
Subjt:  LGGGGPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR

AT2G45070.2 Preprotein translocase Sec, Sec61-beta subunit protein2.1e-2882.72Show/hide
Query:  LGGGGPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR
        +G G PQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVMGKLYFV+
Subjt:  LGGGGPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR

AT2G45070.3 Preprotein translocase Sec, Sec61-beta subunit protein2.1e-2882.72Show/hide
Query:  LGGGGPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR
        +G G PQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVMGKLYFV+
Subjt:  LGGGGPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR

AT2G45070.4 Preprotein translocase Sec, Sec61-beta subunit protein2.1e-2882.72Show/hide
Query:  LGGGGPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR
        +G G PQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVMGKLYFV+
Subjt:  LGGGGPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR

AT3G60540.1 Preprotein translocase Sec, Sec61-beta subunit protein6.2e-2883.33Show/hide
Query:  LGGGGPQRGSAAATASMRRRRTT-SSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR
        +GGG PQRGSAAATASMRRR+    S ++GG AGTMLQFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVMGKLYFV+
Subjt:  LGGGGPQRGSAAATASMRRRRTT-SSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTAGGTGGAGGAGGTCCCCAGAGAGGAAGTGCGGCAGCTACTGCCAGCATGCGCAGGAGAAGAACAACAAGTTCTGGTACATCTGGAGGGGCAGCTGGAACGAT
GCTGCAGTTTTACACGGATGATGCTCCTGGACTCAAGATATCCCCGAATGTTGTTCTCGTCATGAGCATTGGTTTCATTGCTTTTGTTGCCGTTCTCCATGTTATGGGTA
AGCTGTACTTCGTGCGAAGAGAAGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTAGGTGGAGGAGGTCCCCAGAGAGGAAGTGCGGCAGCTACTGCCAGCATGCGCAGGAGAAGAACAACAAGTTCTGGTACATCTGGAGGGGCAGCTGGAACGAT
GCTGCAGTTTTACACGGATGATGCTCCTGGACTCAAGATATCCCCGAATGTTGTTCTCGTCATGAGCATTGGTTTCATTGCTTTTGTTGCCGTTCTCCATGTTATGGGTA
AGCTGTACTTCGTGCGAAGAGAAGCCTAG
Protein sequenceShow/hide protein sequence
MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA