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CSPI03G07630 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G07630
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptioneukaryotic translation initiation factor 5B
Genome locationChr3:6669702..6675934
RNA-Seq ExpressionCSPI03G07630
SyntenyCSPI03G07630
Gene Ontology termsGO:0001763 - morphogenesis of a branching structure (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0020037 - heme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR044989 - Protein TILLER ANGLE CONTROL 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011650662.1 uncharacterized protein LOC105434808 [Cucumis sativus]3.8e-8198.69Show/hide
Query:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRDNGDLIIVDNAEDEDDDEL
        MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRDNGD+IIVDNAEDEDDDEL
Subjt:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRDNGDLIIVDNAEDEDDDEL

Query:  IPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRRRVTLADLLCWF
        IPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIR+RVTLADLLCWF
Subjt:  IPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRRRVTLADLLCWF

XP_016898944.1 PREDICTED: uncharacterized protein LOC103483155 [Cucumis melo]7.4e-5388.52Show/hide
Query:  KEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRDNGDLIIVDNAEDEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQV
        +  KTQGLLA+QVDEFVDDWRIN+GRR TIFFMGFEK+SKTKTY NLRKEGKR+N D+IIVDNA DEDDDELIPLMSTTFQNNFDD+NGEFCTEFEKSQV
Subjt:  KEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRDNGDLIIVDNAEDEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQV

Query:  VLAIQRHVAQRIRRRVTLADLL
        V+AIQRHVAQRIRRRVTLADLL
Subjt:  VLAIQRHVAQRIRRRVTLADLL

XP_023521995.1 bystin-like, partial [Cucurbita pepo subsp. pepo]7.7e-4268.15Show/hide
Query:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFV---DDWRINNGRRLTIFFMGFEKSSKTKT----YFNLRKEGKRDNGDLIIVDNAE
        MFNWVH+ FHY PLK     RKK ESI KEAK QG LA+QVDE V   DDWRI NGRRLTIFFMGF+KSSK++     YFNL KEGK D  D    D+ +
Subjt:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFV---DDWRINNGRRLTIFFMGFEKSSKTKT----YFNLRKEGKRDNGDLIIVDNAE

Query:  DEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRRRVTLADLL
        D+D+D L PLM+TTF NNFDD NGEFCTEF+KS+VV+AI+R+VAQR+RRRVTLADLL
Subjt:  DEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRRRVTLADLL

XP_023540247.1 uncharacterized protein LOC111800673 [Cucurbita pepo subsp. pepo]4.1e-4369.43Show/hide
Query:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFV---DDWRINNGRRLTIFFMGFEKSSKTKT----YFNLRKEGKRDNGDLIIVDNAE
        MFNWVH+ FHY PLK    SRKK ESITKEAK QG LA+QVDE V   DDWRI NGRRLTIFFMGF+KSSK+      YFNL KEGKRD    I+ D+ +
Subjt:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFV---DDWRINNGRRLTIFFMGFEKSSKTKT----YFNLRKEGKRDNGDLIIVDNAE

Query:  DEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRRRVTLADLL
        D+D+D+L PLM+TTF NNFDD NGEFCT+F+KS+VV+AI+RHVA R+RRRVTLADLL
Subjt:  DEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRRRVTLADLL

XP_038903821.1 protein TILLER ANGLE CONTROL 1-like [Benincasa hispida]2.3e-6282.35Show/hide
Query:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRDN--GDLIIVDNAEDEDD-
        MFNWVHTKFHYNPLK GN SRKKGESI K  KTQGLL +QVDEFVDDW+INNGRRLTI FMGFEKSSK + YFNLRKEGKRDN   D+IIVDN  DE+D 
Subjt:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRDN--GDLIIVDNAEDEDD-

Query:  -DELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRRRVTLADL
         DEL PLM+TTFQ NFD++NGEFCTEFEKSQVV+AIQRHVAQRIRRRVTLADL
Subjt:  -DELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRRRVTLADL

TrEMBL top hitse value%identityAlignment
A0A1S4DSI3 uncharacterized protein LOC1034831553.6e-5388.52Show/hide
Query:  KEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRDNGDLIIVDNAEDEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQV
        +  KTQGLLA+QVDEFVDDWRIN+GRR TIFFMGFEK+SKTKTY NLRKEGKR+N D+IIVDNA DEDDDELIPLMSTTFQNNFDD+NGEFCTEFEKSQV
Subjt:  KEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRDNGDLIIVDNAEDEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQV

Query:  VLAIQRHVAQRIRRRVTLADLL
        V+AIQRHVAQRIRRRVTLADLL
Subjt:  VLAIQRHVAQRIRRRVTLADLL

A0A6J1D0S4 uncharacterized protein LOC1110162442.9e-2352.76Show/hide
Query:  MFNWVHTKFHYNPLK---DGNTSRKKGESITKEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKT----YFNLRKEGKRDNGDLIIVDNAE
        MFNW+H+ FHYNPLK     N  RK  +S+ K         +++ + ++DWRI NGRRLTI  +GFE+SSK +     Y NL+KEGKR   D ++ D+  
Subjt:  MFNWVHTKFHYNPLK---DGNTSRKKGESITKEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKT----YFNLRKEGKRDNGDLIIVDNAE

Query:  DEDDDELIPLMSTTFQNNFDDSNGEFC
        D+DDDEL PLM+TTFQNNFDDS GEFC
Subjt:  DEDDDELIPLMSTTFQNNFDDSNGEFC

A0A6J1EIR9 uncharacterized protein LOC1114343435.0e-3967.52Show/hide
Query:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFV---DDWRINNGRRLTIFFMGFEKSSKTKT----YFNLRKEGKRDNGDLIIVDNAE
        MFNWVH+ FHY PLK     RKK  SI KEAK QG L++QVDE V   DDWRI NGRRLTIFFMGF+KSSK++     YFNL KEGK+D  D    DN  
Subjt:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFV---DDWRINNGRRLTIFFMGFEKSSKTKT----YFNLRKEGKRDNGDLIIVDNAE

Query:  DEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRRRVTLADLL
        D D+D L PLM+TTF NNFDD NGEFCTEF+KS+VV+AI+RHVA R+RRRVTLADLL
Subjt:  DEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRRRVTLADLL

A0A6J1ICK1 uncharacterized protein LOC1114736214.5e-4064.97Show/hide
Query:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFV---DDWRINNGRRLTIFFMGFEKSSKTKT----YFNLRKEGKRDNGDLIIVDNAE
        MFNWVH+ FHY PLK     RKK ES+ KEAK QG LA+Q+DE V   DDWRI NGRRLTIFFMGF+KSSK++     YFNL KE KRD   ++  D+ +
Subjt:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFV---DDWRINNGRRLTIFFMGFEKSSKTKT----YFNLRKEGKRDNGDLIIVDNAE

Query:  DEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRRRVTLADLL
        D+D+D L  LM+TTF NNFDD NGEFCTEF+KS+VV+AI+R++AQR+RRRVTLADLL
Subjt:  DEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRRRVTLADLL

A0A6J1ICL7 uncharacterized protein LOC1114744061.7e-3966.24Show/hide
Query:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFV---DDWRINNGRRLTIFFMGFEKSSKTKT----YFNLRKEGKRDNGDLIIVDNAE
        MFNWVH+ FHY PLK     RKK ES+ KEAK QG LA+Q+DE V   DDWRI NGRRLTIFFMGF+KSSK++     YFNL KE KRD     IVD+ +
Subjt:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFV---DDWRINNGRRLTIFFMGFEKSSKTKT----YFNLRKEGKRDNGDLIIVDNAE

Query:  DEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRRRVTLADLL
        D+D+D L  LM+TTF NNFDD NGEFCTEF+KS+VV+AI+R++AQR+RRRVTLADLL
Subjt:  DEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRRRVTLADLL

SwissProt top hitse value%identityAlignment
U3MMQ4 Protein TILLER ANGLE CONTROL 11.8e-0632.89Show/hide
Query:  MFNWVHTKFHYNPLKDGNTSR-KKGESITKEAKTQGLLAE----QVDEFVDDWRINNGRRLTIFFMGFE---KSSKTKTYFNLR-KEGKRDNGDLIIVDN
        +FNWVH + H   +KDG     KK E  T +  TQ  L +     VD  +D WR      LTI   GF+    S+    YF L  +E  +++       N
Subjt:  MFNWVHTKFHYNPLKDGNTSR-KKGESITKEAKTQGLLAE----QVDEFVDDWRINNGRRLTIFFMGFE---KSSKTKTYFNLR-KEGKRDNGDLIIVDN

Query:  AEDEDDD----------ELIPLMSTTFQNNFDDSNGEFCTEFEK-SQVVLAI
         +D+DDD          EL PLM TTF+++F+D    F    +K + V+L +
Subjt:  AEDEDDD----------ELIPLMSTTFQNNFDDSNGEFCTEFEK-SQVVLAI

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAACTGGGTTCACACGAAGTTCCACTACAACCCTCTTAAAGATGGAAATACGTCAAGAAAGAAGGGCGAATCTATCACGAAGGAGGCAAAAACACAAGGATTATT
AGCAGAACAAGTCGATGAATTTGTTGATGATTGGAGGATCAACAATGGCCGCCGTCTTACCATTTTCTTTATGGGATTTGAGAAGTCATCAAAAACCAAAACTTATTTCA
ATTTGAGGAAGGAGGGAAAGAGAGATAATGGAGATCTTATTATTGTTGATAATGCTGAGGACGAGGATGATGATGAGTTGATCCCATTAATGTCGACCACATTTCAGAAC
AACTTTGACGATAGTAATGGTGAATTTTGTACGGAATTCGAGAAGTCTCAAGTAGTCTTGGCTATTCAACGACATGTCGCTCAAAGAATCCGCCGGAGAGTCACGCTGGC
GGACCTGCTTTGTTGGTTTTAA
mRNA sequenceShow/hide mRNA sequence
CAAGAACACTCCACATAATCGTCCTAATCAGTTAGGTGTAGCAGGTAAAGAAAACAAGTGGAAATAAGGGATGAAAACAGGTGCATATTTCTTAAATAAGCTTATGGAGG
CCGTTCCAGAGCCATGTTCAACTGGGTTCACACGAAGTTCCACTACAACCCTCTTAAAGATGGAAATACGTCAAGAAAGAAGGGCGAATCTATCACGAAGGAGGCAAAAA
CACAAGGATTATTAGCAGAACAAGTCGATGAATTTGTTGATGATTGGAGGATCAACAATGGCCGCCGTCTTACCATTTTCTTTATGGGATTTGAGAAGTCATCAAAAACC
AAAACTTATTTCAATTTGAGGAAGGAGGGAAAGAGAGATAATGGAGATCTTATTATTGTTGATAATGCTGAGGACGAGGATGATGATGAGTTGATCCCATTAATGTCGAC
CACATTTCAGAACAACTTTGACGATAGTAATGGTGAATTTTGTACGGAATTCGAGAAGTCTCAAGTAGTCTTGGCTATTCAACGACATGTCGCTCAAAGAATCCGCCGGA
GAGTCACGCTGGCGGACCTGCTTTGTTGGTTTTAAAACAAAGGATCTGTAAAATCTCACGCACTCTTTTTGAAGAAAACAAAGATAAATACGTAGTAAGATATATTGCCA
AGAGGGAGAGAATGTAACAACAAGTGAAAACTACATAAGTTGCAGAAGAAAAA
Protein sequenceShow/hide protein sequence
MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRDNGDLIIVDNAEDEDDDELIPLMSTTFQN
NFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRRRVTLADLLCWF