; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G08850 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G08850
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionMediator of RNA polymerase II transcription subunit 2-like
Genome locationChr3:7336749..7338204
RNA-Seq ExpressionCSPI03G08850
SyntenyCSPI03G08850
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048973.1 mediator of RNA polymerase II transcription subunit 2-like [Cucumis melo var. makuwa]2.6e-2896.3Show/hide
Query:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNSMKVDGSGKKKKGGGGFQVGKKKVKTKLTATAKAKASQAMELDK
        MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKN+MKVDGSGKKKKGGGGFQVGKKKVKTKLTA AKAKASQAM+LDK
Subjt:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNSMKVDGSGKKKKGGGGFQVGKKKVKTKLTATAKAKASQAMELDK
KGN56523.1 hypothetical protein Csa_010072 [Cucumis sativus]1.4e-29100Show/hide
Query:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNSMKVDGSGKKKKGGGGFQVGKKKVKTKLTATAKAKASQAMELDK
        MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNSMKVDGSGKKKKGGGGFQVGKKKVKTKLTATAKAKASQAMELDK
Subjt:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNSMKVDGSGKKKKGGGGFQVGKKKVKTKLTATAKAKASQAMELDK
XP_022147302.1 uncharacterized protein LOC111016287 [Momordica charantia]5.9e-2587.65Show/hide
Query:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNSMKVDGSGKKKKGGGGFQVGKKKVKTKLTATAKAKASQAMELDK
        MSKKN+LSRRKKQ+EFDL+REK E+EKAAKKLQAKKN MKVDGSGK+KKGGGGFQVGKKKVKTKLTA AKAKA+QAMELD+
Subjt:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNSMKVDGSGKKKKGGGGFQVGKKKVKTKLTATAKAKASQAMELDK
XP_022941890.1 uncharacterized protein LOC111447114 [Cucurbita moschata]1.6e-2590.12Show/hide
Query:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNSMKVDGSGKKKKGGGGFQVGKKKVKTKLTATAKAKASQAMELDK
        MSKKN+LSRRK Q+EFDL+REKQEKEKAAKKLQAKKN MKVDGSGKKKKGG GFQVGKKKVKTKLTA AKAKA+QAMELDK
Subjt:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNSMKVDGSGKKKKGGGGFQVGKKKVKTKLTATAKAKASQAMELDK
XP_030457135.1 uncharacterized protein LOC115678006 [Syzygium oleosum]1.6e-2590.12Show/hide
Query:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNSMKVDGSGKKKKGGGGFQVGKKKVKTKLTATAKAKASQAMELDK
        MSKKNSLSRRKKQYEFDL+REK EKEKAAKKLQAKKN MKVDGSGKKKKG GGFQVGK+K+KTKLTA AKAKA+QAMELDK
Subjt:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNSMKVDGSGKKKKGGGGFQVGKKKVKTKLTATAKAKASQAMELDK
TrEMBL top hitse value%identityAlignment
A0A0A0L493 Uncharacterized protein6.6e-30100Show/hide
Query:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNSMKVDGSGKKKKGGGGFQVGKKKVKTKLTATAKAKASQAMELDK
        MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNSMKVDGSGKKKKGGGGFQVGKKKVKTKLTATAKAKASQAMELDK
Subjt:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNSMKVDGSGKKKKGGGGFQVGKKKVKTKLTATAKAKASQAMELDK
A0A5A7TZC8 Mediator of RNA polymerase II transcription subunit 2-like1.2e-2896.3Show/hide
Query:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNSMKVDGSGKKKKGGGGFQVGKKKVKTKLTATAKAKASQAMELDK
        MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKN+MKVDGSGKKKKGGGGFQVGKKKVKTKLTA AKAKASQAM+LDK
Subjt:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNSMKVDGSGKKKKGGGGFQVGKKKVKTKLTATAKAKASQAMELDK
A0A6J1D208 uncharacterized protein LOC1110162872.9e-2587.65Show/hide
Query:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNSMKVDGSGKKKKGGGGFQVGKKKVKTKLTATAKAKASQAMELDK
        MSKKN+LSRRKKQ+EFDL+REK E+EKAAKKLQAKKN MKVDGSGK+KKGGGGFQVGKKKVKTKLTA AKAKA+QAMELD+
Subjt:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNSMKVDGSGKKKKGGGGFQVGKKKVKTKLTATAKAKASQAMELDK
A0A6J1FV29 uncharacterized protein LOC1114471147.5e-2690.12Show/hide
Query:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNSMKVDGSGKKKKGGGGFQVGKKKVKTKLTATAKAKASQAMELDK
        MSKKN+LSRRK Q+EFDL+REKQEKEKAAKKLQAKKN MKVDGSGKKKKGG GFQVGKKKVKTKLTA AKAKA+QAMELDK
Subjt:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNSMKVDGSGKKKKGGGGFQVGKKKVKTKLTATAKAKASQAMELDK
A0A6J1IED7 uncharacterized protein LOC1114732887.5e-2690.12Show/hide
Query:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNSMKVDGSGKKKKGGGGFQVGKKKVKTKLTATAKAKASQAMELDK
        MSKKN+LSRRK Q+EFDL+REKQEKEKAAKKLQAKKN MKVDGSGKKKKGG GFQVGKKKVKTKLTA AKAKA+QAMELDK
Subjt:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNSMKVDGSGKKKKGGGGFQVGKKKVKTKLTATAKAKASQAMELDK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G45860.1 unknown protein9.4e-2172.5Show/hide
Query:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNSMKVDGSGKKKKGGGGFQVGKKKVKTKLTATAKAKASQAMELD
        MSKKN+L++RKKQ+E++LQ+EK+ ++K  KKL A KN MKVDGSGKKKK  GGF VGKKK+KTKLT TAKAKA+QAMELD
Subjt:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNSMKVDGSGKKKKGGGGFQVGKKKVKTKLTATAKAKASQAMELD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAGAAGAACAGTCTTTCGCGCAGGAAGAAACAATATGAATTCGACCTTCAAAGGGAGAAACAAGAAAAGGAAAAGGCTGCTAAGAAGCTTCAAGCAAAGAAGAA
TAGTATGAAAGTTGATGGTAGTGGAAAGAAAAAGAAGGGTGGAGGTGGATTTCAAGTTGGGAAGAAAAAAGTGAAGACCAAGTTGACGGCAACAGCAAAAGCAAAAGCTT
CTCAAGCTATGGAGCTTGATAAATGA
mRNA sequenceShow/hide mRNA sequence
ATTATGAATTAGGGTTTAAGAAGACGACGTTGGGATATCCAAATTTCTGGCGGCAGACCAACAATATGTCGAAGAAGAACAGTCTTTCGCGCAGGAAGAAACAATATGAA
TTCGACCTTCAAAGGGAGAAACAAGAAAAGGAAAAGGCTGCTAAGAAGCTTCAAGCAAAGAAGAATAGTATGAAAGTTGATGGTAGTGGAAAGAAAAAGAAGGGTGGAGG
TGGATTTCAAGTTGGGAAGAAAAAAGTGAAGACCAAGTTGACGGCAACAGCAAAAGCAAAAGCTTCTCAAGCTATGGAGCTTGATAAATGAGGTTGGCAATGGGTGCAGA
GGCTGAATCTTCAGGGTACCATTAGCCCTTCGTTTTGGAGAAAATCTGGTGAAATGCATTGGCATTATTTGAACTCAAGTAGTTTATCATTGAAGATCCAATTCGTCTCA
TTCTTTTAGATCTCAGTCCCTTTCTTGTAATCTAATTCGAGTAGTACTCATTTGATATTTTTCCTTCTGTTTAGCATGTCCTTGTACATTATTTCATACTTTTCAATGAA
AGCTCCACTTTTTTGTCAAGAAAACATATGGCTTATGGGTT
Protein sequenceShow/hide protein sequence
MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNSMKVDGSGKKKKGGGGFQVGKKKVKTKLTATAKAKASQAMELDK