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CSPI03G09960 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G09960
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionlate embryogenesis abundant protein 6-like
Genome locationChr3:8037559..8038723
RNA-Seq ExpressionCSPI03G09960
SyntenyCSPI03G09960
Gene Ontology termsGO:0009793 - embryo development ending in seed dormancy (biological process)
InterPro domainsIPR005513 - Late embryogenesis abundant protein, LEA_1 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134355.1 late embryogenesis abundant protein 6 [Cucumis sativus]2.4e-5499.17Show/hide
Query:  MQAVREKLHDMSIMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPGGTTTLPDYSVPVAPGMTM
        MQAVREKLHDMS+MRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPGGTTTLPDYSVPVAPGMTM
Subjt:  MQAVREKLHDMSIMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPGGTTTLPDYSVPVAPGMTM

Query:  VGAPGTVDMAGAPSPVNKKLL
        VGAPGTVDMAGAPSPVNKKLL
Subjt:  VGAPGTVDMAGAPSPVNKKLL

XP_008438228.1 PREDICTED: uncharacterized protein LOC103483397 [Cucumis melo]2.7e-5093.5Show/hide
Query:  MQAVREKLHDMSIMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPGGTTTLPDYS--VPVAPGM
        MQAV+EKLHDMS+MRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFV+PGGT T PDYS  VPVAPGM
Subjt:  MQAVREKLHDMSIMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPGGTTTLPDYS--VPVAPGM

Query:  TMVGAPGTVDMAGAPSPVNKKLL
        TMVGAPGTVDMAGAPSP NKKLL
Subjt:  TMVGAPGTVDMAGAPSPVNKKLL

XP_022924652.1 late embryogenesis abundant protein 6-like [Cucurbita moschata]3.2e-3577.87Show/hide
Query:  MQAVREKLHDMSIMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPG-GTTTLPDYSVPVAPGMT
        MQAVR+KLHD++ MRKAK+EAKAEEKAEKELAKARVEVAHEVRLAREAEAAM LHVAKAG +AEKEMAK+A+ HTN FV+PG GTTT    +V  APG+T
Subjt:  MQAVREKLHDMSIMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPG-GTTTLPDYSVPVAPGMT

Query:  MVGAPGTVDMAGAPSPVNKKLL
        MVGAPGTVDMAG P  V+KK L
Subjt:  MVGAPGTVDMAGAPSPVNKKLL

XP_023526293.1 late embryogenesis abundant protein 6-like isoform X2 [Cucurbita pepo subsp. pepo]4.2e-3577.87Show/hide
Query:  MQAVREKLHDMSIMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPG-GTTTLPDYSVPVAPGMT
        MQAVR+KLHD++ MRKAK+EAKAEEKAEKELAKARVEVAHEVRLAREAEAAM LHVAKAG +AEKEMAK+A+THTN FV+PG GTTT     V  APG+T
Subjt:  MQAVREKLHDMSIMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPG-GTTTLPDYSVPVAPGMT

Query:  MVGAPGTVDMAGAPSPVNKKLL
        MVGAPGTVDM G P  V+KK L
Subjt:  MVGAPGTVDMAGAPSPVNKKLL

XP_038878054.1 late embryogenesis abundant protein 6-like [Benincasa hispida]4.3e-4081.97Show/hide
Query:  MQAVREKLHDMSIMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPGGTTTLP-DYSVPVAPGMT
        MQAV++KLHD+S+MRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEM KYA+THT+TFV+PGGT  L     + VAPG+T
Subjt:  MQAVREKLHDMSIMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPGGTTTLP-DYSVPVAPGMT

Query:  MVGAPGTVDMAGAPSPVNKKLL
        +V APGTV+MAGAP PVNKKLL
Subjt:  MVGAPGTVDMAGAPSPVNKKLL

TrEMBL top hitse value%identityAlignment
A0A0A0L6I7 Uncharacterized protein1.1e-5499.17Show/hide
Query:  MQAVREKLHDMSIMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPGGTTTLPDYSVPVAPGMTM
        MQAVREKLHDMS+MRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPGGTTTLPDYSVPVAPGMTM
Subjt:  MQAVREKLHDMSIMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPGGTTTLPDYSVPVAPGMTM

Query:  VGAPGTVDMAGAPSPVNKKLL
        VGAPGTVDMAGAPSPVNKKLL
Subjt:  VGAPGTVDMAGAPSPVNKKLL

A0A1S3AWI7 uncharacterized protein LOC1034833971.3e-5093.5Show/hide
Query:  MQAVREKLHDMSIMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPGGTTTLPDYS--VPVAPGM
        MQAV+EKLHDMS+MRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFV+PGGT T PDYS  VPVAPGM
Subjt:  MQAVREKLHDMSIMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPGGTTTLPDYS--VPVAPGM

Query:  TMVGAPGTVDMAGAPSPVNKKLL
        TMVGAPGTVDMAGAPSP NKKLL
Subjt:  TMVGAPGTVDMAGAPSPVNKKLL

A0A5A7U624 Late embryogenesis abundant protein1.3e-5093.5Show/hide
Query:  MQAVREKLHDMSIMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPGGTTTLPDYS--VPVAPGM
        MQAV+EKLHDMS+MRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFV+PGGT T PDYS  VPVAPGM
Subjt:  MQAVREKLHDMSIMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPGGTTTLPDYS--VPVAPGM

Query:  TMVGAPGTVDMAGAPSPVNKKLL
        TMVGAPGTVDMAGAPSP NKKLL
Subjt:  TMVGAPGTVDMAGAPSPVNKKLL

A0A6J1ED39 late embryogenesis abundant protein 6-like1.6e-3577.87Show/hide
Query:  MQAVREKLHDMSIMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPG-GTTTLPDYSVPVAPGMT
        MQAVR+KLHD++ MRKAK+EAKAEEKAEKELAKARVEVAHEVRLAREAEAAM LHVAKAG +AEKEMAK+A+ HTN FV+PG GTTT    +V  APG+T
Subjt:  MQAVREKLHDMSIMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPG-GTTTLPDYSVPVAPGMT

Query:  MVGAPGTVDMAGAPSPVNKKLL
        MVGAPGTVDMAG P  V+KK L
Subjt:  MVGAPGTVDMAGAPSPVNKKLL

A0A6J1IRE5 late embryogenesis abundant protein 6-like4.5e-3577.05Show/hide
Query:  MQAVREKLHDMSIMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPG-GTTTLPDYSVPVAPGMT
        MQAVR+KLHD++ MRKAK+EAKAEEKAEKELAKARVEVAHEVRLAREAEAAM LHVAKAG +AEKEMAK+A+ HTN FV+PG GTTT    +V  APG+T
Subjt:  MQAVREKLHDMSIMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPG-GTTTLPDYSVPVAPGMT

Query:  MVGAPGTVDMAGAPSPVNKKLL
        MVGAPGTVDM G P  V+KK L
Subjt:  MVGAPGTVDMAGAPSPVNKKLL

SwissProt top hitse value%identityAlignment
Q39138 Late embryogenesis abundant protein 69.5e-0645.57Show/hide
Query:  MQAVREKLHDMSIMRKAK---AEAKAEEKAEKELA--KARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTH
        MQ+ ++K+ DM+   K K    +AKA+EKAE+ +A  K   E+AH+ R A+EAEA MD+H+AKA    +K MAK +  H
Subjt:  MQAVREKLHDMSIMRKAK---AEAKAEEKAEKELA--KARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTH

Arabidopsis top hitse value%identityAlignment
AT1G32560.1 Late embryogenesis abundant protein, group 1 protein6.7e-0745.57Show/hide
Query:  MQAVREKLHDMSIMRKAK---AEAKAEEKAEKELA--KARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTH
        MQ+ ++K+ DM+   K K    +AKA+EKAE+ +A  K   E+AH+ R A+EAEA MD+H+AKA    +K MAK +  H
Subjt:  MQAVREKLHDMSIMRKAK---AEAKAEEKAEKELA--KARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGCAGTTAGGGAGAAGCTACACGATATGAGCATCATGCGCAAGGCCAAGGCCGAGGCAAAGGCCGAAGAGAAGGCAGAGAAGGAGCTAGCAAAAGCAAGAGTGGA
AGTGGCTCATGAGGTAAGATTGGCACGAGAGGCTGAAGCTGCGATGGATCTTCATGTAGCCAAAGCTGGAATGAAGGCTGAGAAAGAGATGGCTAAGTATGCTGATACTC
ACACCAATACCTTTGTGTCTCCTGGCGGAACCACCACCCTTCCTGATTACTCCGTACCAGTAGCTCCCGGCATGACTATGGTTGGAGCCCCTGGCACCGTCGACATGGCC
GGAGCTCCTTCTCCCGTTAATAAGAAGTTATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATTAACATTCTCTCTAAAGCTTTCCAAAGGCTGAATTTCAAACAGACAATCTTCAATTTTTACAAGTCCATAAACAAAAAGATGCAAGCAGTTAGGGAGAAGCTACACGA
TATGAGCATCATGCGCAAGGCCAAGGCCGAGGCAAAGGCCGAAGAGAAGGCAGAGAAGGAGCTAGCAAAAGCAAGAGTGGAAGTGGCTCATGAGGTAAGATTGGCACGAG
AGGCTGAAGCTGCGATGGATCTTCATGTAGCCAAAGCTGGAATGAAGGCTGAGAAAGAGATGGCTAAGTATGCTGATACTCACACCAATACCTTTGTGTCTCCTGGCGGA
ACCACCACCCTTCCTGATTACTCCGTACCAGTAGCTCCCGGCATGACTATGGTTGGAGCCCCTGGCACCGTCGACATGGCCGGAGCTCCTTCTCCCGTTAATAAGAAGTT
ATTGTAAAAAAAAGTTCTTGTGTAACGCCATGCATAAAAAGTTTCATCTTTTATTTGCAAATAATGTACTTTGATTTGTTTTCTTTTTTCTACAAAGTTCTATATTATTC
TACCACATCTTTAGATGTTGTGTAGTATATATTATAATCAATACACACAATAGCATTTAAGATCCTATTTTCGTT
Protein sequenceShow/hide protein sequence
MQAVREKLHDMSIMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVSPGGTTTLPDYSVPVAPGMTMVGAPGTVDMA
GAPSPVNKKLL