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CSPI03G10350 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G10350
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationChr3:8298959..8299513
RNA-Seq ExpressionCSPI03G10350
SyntenyCSPI03G10350
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN56686.1 hypothetical protein Csa_011352 [Cucumis sativus]3.2e-46100Show/hide
Query:  MFPIFLILKNWAEIVSTAQLADELLNRAQFSAQIQLSKAHFRNNMPICQNVVFLLDHTKQSPVRSSFPPLSPAFTLQLLAVRRVIADHTARWNGIR
        MFPIFLILKNWAEIVSTAQLADELLNRAQFSAQIQLSKAHFRNNMPICQNVVFLLDHTKQSPVRSSFPPLSPAFTLQLLAVRRVIADHTARWNGIR
Subjt:  MFPIFLILKNWAEIVSTAQLADELLNRAQFSAQIQLSKAHFRNNMPICQNVVFLLDHTKQSPVRSSFPPLSPAFTLQLLAVRRVIADHTARWNGIR
TYK17450.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]2.7e-1690Show/hide
Query:  MPICQNVVFLLDHTKQSPVRSSFPPLSPAFTLQLLAVRRVIADHTA-RWN
        MPICQNVVFLLDHTKQSPVRSSFPP+SPAFTLQ LAVRRVI+DHTA +WN
Subjt:  MPICQNVVFLLDHTKQSPVRSSFPPLSPAFTLQLLAVRRVIADHTA-RWN
TrEMBL top hitse value%identityAlignment
A0A0A0L994 Uncharacterized protein1.6e-46100Show/hide
Query:  MFPIFLILKNWAEIVSTAQLADELLNRAQFSAQIQLSKAHFRNNMPICQNVVFLLDHTKQSPVRSSFPPLSPAFTLQLLAVRRVIADHTARWNGIR
        MFPIFLILKNWAEIVSTAQLADELLNRAQFSAQIQLSKAHFRNNMPICQNVVFLLDHTKQSPVRSSFPPLSPAFTLQLLAVRRVIADHTARWNGIR
Subjt:  MFPIFLILKNWAEIVSTAQLADELLNRAQFSAQIQLSKAHFRNNMPICQNVVFLLDHTKQSPVRSSFPPLSPAFTLQLLAVRRVIADHTARWNGIR
A0A5D3D1G3 Pentatricopeptide repeat-containing protein1.3e-1690Show/hide
Query:  MPICQNVVFLLDHTKQSPVRSSFPPLSPAFTLQLLAVRRVIADHTA-RWN
        MPICQNVVFLLDHTKQSPVRSSFPP+SPAFTLQ LAVRRVI+DHTA +WN
Subjt:  MPICQNVVFLLDHTKQSPVRSSFPPLSPAFTLQLLAVRRVIADHTA-RWN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCCTATCTTTCTCATCTTGAAAAATTGGGCTGAAATCGTTTCAACAGCCCAACTAGCAGACGAGCTTCTCAACAGAGCCCAATTTTCGGCCCAAATTCAGCTGAG
TAAGGCCCATTTCAGAAACAACATGCCCATTTGCCAAAACGTCGTCTTCCTTCTTGACCATACAAAACAAAGTCCCGTTCGTAGTTCCTTCCCGCCTCTTTCGCCGGCAT
TTACGCTTCAGCTACTCGCCGTCCGGCGAGTTATCGCCGATCATACTGCGCGTTGGAATGGAATTCGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCCCTATCTTTCTCATCTTGAAAAATTGGGCTGAAATCGTTTCAACAGCCCAACTAGCAGACGAGCTTCTCAACAGAGCCCAATTTTCGGCCCAAATTCAGCTGAG
TAAGGCCCATTTCAGAAACAACATGCCCATTTGCCAAAACGTCGTCTTCCTTCTTGACCATACAAAACAAAGTCCCGTTCGTAGTTCCTTCCCGCCTCTTTCGCCGGCAT
TTACGCTTCAGCTACTCGCCGTCCGGCGAGTTATCGCCGATCATACTGCGCGTTGGAATGGAATTCGGTAG
Protein sequenceShow/hide protein sequence
MFPIFLILKNWAEIVSTAQLADELLNRAQFSAQIQLSKAHFRNNMPICQNVVFLLDHTKQSPVRSSFPPLSPAFTLQLLAVRRVIADHTARWNGIR