CuGenDBv2

Gene ID	CSPI03G10770
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Chromatin assembly factor 1 subunit A
Genome location	Chr3:8509221..8512330
RNA-Seq Expression	CSPI03G10770
Synteny	CSPI03G10770
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6582480.1 hypothetical protein SDJN03_22482, partial [Cucurbita argyrosperma subsp. sororia]

4.7e-73

82.9

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Query:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK
        MA  S S IR ATNLSNNLLRSFSTSIK+A HNNH QT +YLEA++F+GSW+APK+PKEAQA+LA LRR+YAKQVKQVRKNYIQEVE+LRLE+++KDEAK
Subjt:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK

Query:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL
        +EALRVANEERKKLKAEAAK RAEERKVADEEFR TL+KER EKLEHWRMMEKKREEKKKEK E +RRQSSMWVDE KLEEKLL+AIVNTI L
Subjt:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL

XP_004133989.1 chromatin assembly factor 1 subunit A [Cucumis sativus]

1.6e-89

100

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Query:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK
        MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK
Subjt:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK

Query:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL
        KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL
Subjt:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL

XP_008438350.1 PREDICTED: LOW QUALITY PROTEIN: chromatin assembly factor 1 subunit A [Cucumis melo]

1.0e-83

93.26

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Query:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK
        MAFASGSVIRNATNLSNNLLRSFSTSIK+A +NNHLQT EYLEANSFIGSWQAPK+PKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLE+EQKDEAK
Subjt:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK

Query:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL
        +EALRVANEERKKLKAEAAKVRAEERK+ADEEFRLTL+KERAEKLEHWRMMEKKREEK KEKKELLRRQSS W+DENKLEEKLLEAIVNT+TL
Subjt:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL

XP_022980429.1 uncharacterized protein LOC111479798 [Cucurbita maxima]

1.2e-73

83.42

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Query:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK
        MA  S S IR+ATNLSNNLLRSFSTSIK+A HNNH QT +YLEA++F+GSW+APK+PKEAQA+LA LRR+YAKQVKQVRKNYIQEVELLRLE++ KDEAK
Subjt:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK

Query:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL
        +EALRVANEERKKLKAEAAK RAEERKVADEEFR TL+KER EKLEHWRMMEKKREEKKKEK E++RRQSSMWVDE KLEEKLL+AIVNTI L
Subjt:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL

XP_038892259.1 chromatin assembly factor 1 subunit A [Benincasa hispida]

3.3e-74

83.94

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Query:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK
        MAF   S IR AT+LSNNLLRS STS K+A HNNH QT +YLEAN+FIGSW+APK+PKEAQA+LA+LRR+YAKQ+KQVRKNYIQEVELLRLE+E+KDEAK
Subjt:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK

Query:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL
        +EALRVANEERKKLKAEAAKVRAEERKVADEEFRLTL+KERAEKLEHWRMMEKKR+EKKKEK +LLRRQSS+WVDENKLEEKLL+AIVNT  L
Subjt:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L7X4 Uncharacterized protein

7.9e-90

100

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Query:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK
        MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK
Subjt:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK

Query:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL
        KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL
Subjt:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL

A0A1S3AWS6 LOW QUALITY PROTEIN: chromatin assembly factor 1 subunit A

4.9e-84

93.26

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Query:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK
        MAFASGSVIRNATNLSNNLLRSFSTSIK+A +NNHLQT EYLEANSFIGSWQAPK+PKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLE+EQKDEAK
Subjt:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK

Query:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL
        +EALRVANEERKKLKAEAAKVRAEERK+ADEEFRLTL+KERAEKLEHWRMMEKKREEK KEKKELLRRQSS W+DENKLEEKLLEAIVNT+TL
Subjt:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL

A0A6J1E8D4 UPF0329 protein ECU05_1680/ECU11_0050-like

5.1e-73

82.38

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Query:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK
        MA  S S IR ATN+SNNLLRSFSTSIK+A HNNH QT +YLEA++F+GSW+APK+PKEAQA+LA LRR+YAKQVKQVRKNYIQEVE+LRLE+++KDEAK
Subjt:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK

Query:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL
        +EALRVANEERKKLKAEAAK RAEERKVADEEFR TL+KER EKLEHWRMMEKKREEKKKEK E +RRQSSMWVDE KLEEKLL+AIVNTI L
Subjt:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL

A0A6J1FLI1 UPF0329 protein ECU05_1680/ECU11_0050-like

8.2e-71

80.83

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Query:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK
        MAFAS S IR ATN S+ LLRSFSTS K+A HNNH QT +YLEAN+F+GSW+APK+PKEAQARLA LRR+YAK+VKQVRKNYIQEVELLRLE+++KDEAK
Subjt:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK

Query:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL
        +EALRV NEERKKLKAEAAK RAEERKVADEEFR TL+KERAEKLEHWRMMEK REEKK EK EL+RRQS MW+DE KLEEKLL+AIVNT  L
Subjt:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL

A0A6J1IZ92 uncharacterized protein LOC111479798

6.0e-74

83.42

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Query:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK
        MA  S S IR+ATNLSNNLLRSFSTSIK+A HNNH QT +YLEA++F+GSW+APK+PKEAQA+LA LRR+YAKQVKQVRKNYIQEVELLRLE++ KDEAK
Subjt:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK

Query:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL
        +EALRVANEERKKLKAEAAK RAEERKVADEEFR TL+KER EKLEHWRMMEKKREEKKKEK E++RRQSSMWVDE KLEEKLL+AIVNTI L
Subjt:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G49210.1 unknown protein

1.5e-45

58.62

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Query:  LRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAKKEALRVANEERKKLKAEAA
        LRSFS       H  H +T  +LE   +IGSW+AP +PK+A+ +LA+LRR+YAK+V+  RK YI E+E+LR+E+++KDEA+  A R ANEER+ LKAEAA
Subjt:  LRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAKKEALRVANEERKKLKAEAA

Query:  KVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL
        KVRAEERK+ADEEFR TL+KERAEKLE W+MM +KREEK KE+++LLR QSS+W+++ +LE K+ EA+V+ + L
Subjt:  KVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL

AT5G49210.2 unknown protein

1.5e-45

58.62

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Query:  LRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAKKEALRVANEERKKLKAEAA
        LRSFS       H  H +T  +LE   +IGSW+AP +PK+A+ +LA+LRR+YAK+V+  RK YI E+E+LR+E+++KDEA+  A R ANEER+ LKAEAA
Subjt:  LRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAKKEALRVANEERKKLKAEAA

Query:  KVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL
        KVRAEERK+ADEEFR TL+KERAEKLE W+MM +KREEK KE+++LLR QSS+W+++ +LE K+ EA+V+ + L
Subjt:  KVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL

Sequences

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CDS sequence

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ATGGCGTTTGCGTCTGGTTCCGTGATCCGCAATGCAACCAATCTCTCTAATAACCTTCTTCGTTCCTTCTCCACTTCCATCAAAACCGCTCAACATAACAATCACCTGCA
GACCCAAGAATACTTGGAGGCGAACAGCTTTATTGGTAGCTGGCAGGCCCCGAAAAACCCCAAGGAAGCGCAGGCCAGACTTGCTCGGCTCCGAAGGGAGTATGCCAAGC
AGGTGAAACAGGTACGTAAGAATTACATCCAGGAGGTTGAACTCTTGAGGCTCGAAAGGGAGCAGAAGGACGAAGCCAAGAAAGAAGCGCTTAGGGTTGCCAATGAGGAA
CGCAAGAAGCTTAAAGCTGAAGCTGCTAAAGTCCGAGCTGAAGAGCGTAAGGTTGCTGATGAAGAGTTCCGACTGACTTTGGTGAAAGAAAGAGCTGAGAAGTTGGAGCA
TTGGAGAATGATGGAAAAGAAGAGGGAAGAAAAAAAGAAAGAAAAGAAGGAGCTACTAAGACGGCAGAGTTCCATGTGGGTTGATGAAAATAAATTGGAAGAGAAGCTAT
TAGAAGCCATTGTTAATACCATCACTCTCTGA

mRNA sequence

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TCTCTTTTTCATATCAACCGTTCCCATCTTATTCCTCTCTCTACTCTCACTCCCCAAGCTGCCATTTGCAAAATGCTTCCATCTCGAGCTCTATAATCAACCCTTTGTTT
TTTTCGTTCTTCAATTCGTAATTTTGAAATCCCTGTTTTTGTTCGAATTTATTTTTTCAAATCGTTTTGATTTTGAAGCCCAGAAGCTTGTACGACACCGATGGCGTTTG
CGTCTGGTTCCGTGATCCGCAATGCAACCAATCTCTCTAATAACCTTCTTCGTTCCTTCTCCACTTCCATCAAAACCGCTCAACATAACAATCACCTGCAGACCCAAGAA
TACTTGGAGGCGAACAGCTTTATTGGTAGCTGGCAGGCCCCGAAAAACCCCAAGGAAGCGCAGGCCAGACTTGCTCGGCTCCGAAGGGAGTATGCCAAGCAGGTGAAACA
GGTACGTAAGAATTACATCCAGGAGGTTGAACTCTTGAGGCTCGAAAGGGAGCAGAAGGACGAAGCCAAGAAAGAAGCGCTTAGGGTTGCCAATGAGGAACGCAAGAAGC
TTAAAGCTGAAGCTGCTAAAGTCCGAGCTGAAGAGCGTAAGGTTGCTGATGAAGAGTTCCGACTGACTTTGGTGAAAGAAAGAGCTGAGAAGTTGGAGCATTGGAGAATG
ATGGAAAAGAAGAGGGAAGAAAAAAAGAAAGAAAAGAAGGAGCTACTAAGACGGCAGAGTTCCATGTGGGTTGATGAAAATAAATTGGAAGAGAAGCTATTAGAAGCCAT
TGTTAATACCATCACTCTCTGAGCTTTCTTACTTTCCAGTGATAATTGCCCAACTTTCTCTTACGTTTCTTTGTTGGAAGCAATTTTTAGTTACTGGATTCTAGCTGAGA
AGTTTCTGCATAATCCAAGTTTTTGACTCTTGCGATGAAGCACTCGACATCTTGTACACCCTTTTGTTACTGTTATTATTATCGTTTGGGGGAAAATCAGTTTCTACTCT
TTGATGTTGTTTCTGTTATTATTATCATTAGGGGGGAAAGTCAGTTTCTTCTACACTTTGATGTTGTAGCATTTAAAACTTCAAACTAATAATTCTATAATTCTATCAAT
TTTGTGCATGTTATCTTCATTACAAAGTTATAGAATTTTAGTTCTCTTCTTGTCT

Protein sequence

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MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAKKEALRVANEE
RKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL

CSPI03G10770 (gene) of Cucumber (PI 183967) v1 genome