CuGenDBv2

Gene ID	CSPI03G11230
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	S-protein homolog
Genome location	Chr3:8819338..8820489
RNA-Seq Expression	CSPI03G11230
Synteny	CSPI03G11230
Gene Ontology terms	GO:0060320 - rejection of self pollen (biological process) GO:0005576 - extracellular region (cellular component)
InterPro domains	IPR010264 - Plant self-incompatibility S1

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7018836.1 Self-incompatibility protein S1, partial [Cucurbita argyrosperma subsp. argyrosperma]

6.7e-72

93.79

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Query:  MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTR
        MIMKILVSILMLI FPFFTVF+SLLP EQL+GIEYEVRVINGFTNNSSLPLVIWCASKD DIGGRALQEHDDFSWPV+TNFWI TTTSQFSCTVKLDRTR
Subjt:  MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTR

Query:  KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        KSFDAFKVPRDIYRCSALRKC+WLV+EDGFYFSDDEVNWKKDFSW
Subjt:  KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

TYK17379.1 self-incompatibility family protein [Cucumis melo var. makuwa]

5.9e-76

99.31

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Query:  MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTR
        MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLDRTR
Subjt:  MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTR

Query:  KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

XP_004134017.2 S-protein homolog 6 [Cucumis sativus]

3.1e-77

100

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Query:  MKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKS
        MKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKS
Subjt:  MKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKS

Query:  FDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        FDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  FDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

XP_016898907.1 PREDICTED: uncharacterized protein LOC103483510 [Cucumis melo]

6.3e-78

100

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Query:  MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTR
        MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTR
Subjt:  MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTR

Query:  KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

XP_038876719.1 S-protein homolog 6-like [Benincasa hispida]

4.2e-74

97.2

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Query:  MKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKS
        MKIL+SILMLIFFPFF+VFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKD DIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLDRTRKS
Subjt:  MKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKS

Query:  FDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        FDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  FDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L6V3 S-protein homolog

7.8e-66

100

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Query:  EQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVME
        EQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVME
Subjt:  EQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVME

Query:  DGFYFSDDEVNWKKDFSW
        DGFYFSDDEVNWKKDFSW
Subjt:  DGFYFSDDEVNWKKDFSW

A0A1S4DSD2 S-protein homolog

3.0e-78

100

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Query:  MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTR
        MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTR
Subjt:  MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTR

Query:  KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

A0A5A7U6C9 S-protein homolog

3.0e-78

100

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Query:  MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTR
        MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTR
Subjt:  MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTR

Query:  KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

A0A5D3D3G0 S-protein homolog

2.8e-76

99.31

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Query:  MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTR
        MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLDRTR
Subjt:  MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTR

Query:  KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

A0A6J1GCS3 S-protein homolog

4.0e-70

91.61

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Query:  MKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKS
        MKIL+SILMLIFFPFFTVF+SLLP + L+GIEYEVRVINGFTNNSSLPLVIWCASKD DIGGRALQEHDDFSW VKTNFWI TTTSQFSCTVKLDRTR+S
Subjt:  MKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKS

Query:  FDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        FDAFKVPRDIYRCSA RKCSWLVMEDGFYFSDDEVNWKK+FSW
Subjt:  FDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G26798.1 Plant self-incompatibility protein S1 family

2.8e-07

33.33

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Query:  VRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPRD---IYRCSALRKCSWLVMEDG
        V +IN  T N    LV+ C +K  D+G  AL+  +   +  + N   TTT   ++CT       K+FD F+V RD      C   R+C W + E G
Subjt:  VRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPRD---IYRCSALRKCSWLVMEDG

AT3G24060.1 Plant self-incompatibility protein S1 family

1.6e-39

54.23

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Query:  ILVSILMLIFFPFFTVFVSLLPAEQLF-GIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSF
        I++ + MLI      +F  +L  + +F G E++VRVIN F +NSSLPLVIWC S  GD+GGRALQE DDF W  K + W  +  ++++CT+K D  RK F
Subjt:  ILVSILMLIFFPFFTVFVSLLPAEQLF-GIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSF

Query:  DAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        +AFKV RD  RC + +KCSW V EDGFYFS DEV W KDFSW
Subjt:  DAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

Sequences

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CDS sequence

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ATGATCATGAAGATTCTCGTTAGCATTCTGATGCTCATTTTCTTCCCATTCTTCACTGTTTTCGTGTCACTGTTACCTGCAGAGCAACTGTTTGGCATAGAATACGAAGT
CCGTGTGATCAATGGCTTCACAAACAACTCCTCACTTCCTCTAGTGATATGGTGCGCTTCCAAAGACGGTGATATTGGCGGGCGTGCGCTCCAGGAGCATGATGATTTCA
GTTGGCCTGTCAAGACCAACTTCTGGATTACTACAACAACCTCTCAATTCTCATGCACTGTCAAATTGGACCGTACAAGGAAAAGTTTTGATGCATTCAAGGTACCAAGA
GATATCTATCGCTGTAGTGCTCTCAGGAAATGCTCGTGGTTGGTTATGGAAGATGGGTTTTATTTCAGCGATGATGAAGTAAACTGGAAGAAGGATTTCTCGTGGTAA

mRNA sequence

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GGGCTAACTTGAATGTGTCATTAAGATTTTCATCATTTTCCTAAAGAAAGTTCTGAAAAATCACGCGCCGCGTCTCTGCTAGTGGGTGTGCATCTACATTTTTCTCTTCC
AGATGTTCAATATATAGAACATGTGTCAAATTAATGGAGCATATAATTCTCTCTTGATATGTTATACGAGAATATCTAGAAAGGAAAAGCACACTTGCGGTTCTTCTACC
TAAATTTTTCACAACCATTTCTCTTAGTACCATCTACTACACATTTAGCACATAAAAATGAACAGTGAAAGTGCATTTCACTGAAGTAGTACGTCCTCATCATTGAGAAC
GTAAAAAGTCTAGAATTACCGTTCTTAGAAAAAAGAAGCTAGCTTCGAGACCATATAAAGCTTGAGCAACACTGCCATCATTTACACCAGAAAATTTGAGTTTCCATTGT
TTCATGATCATGAAGATTCTCGTTAGCATTCTGATGCTCATTTTCTTCCCATTCTTCACTGTTTTCGTGTCACTGTTACCTGCAGAGCAACTGTTTGGCATAGAATACGA
AGTCCGTGTGATCAATGGCTTCACAAACAACTCCTCACTTCCTCTAGTGATATGGTGCGCTTCCAAAGACGGTGATATTGGCGGGCGTGCGCTCCAGGAGCATGATGATT
TCAGTTGGCCTGTCAAGACCAACTTCTGGATTACTACAACAACCTCTCAATTCTCATGCACTGTCAAATTGGACCGTACAAGGAAAAGTTTTGATGCATTCAAGGTACCA
AGAGATATCTATCGCTGTAGTGCTCTCAGGAAATGCTCGTGGTTGGTTATGGAAGATGGGTTTTATTTCAGCGATGATGAAGTAAACTGGAAGAAGGATTTCTCGTGGTA
AAGCACCAGACCAGCTAAGTTCTCTCTACTCTACTCTACTCTGTTCTACTTCTACTTCTACTTCTCTACTAGTTTTGCTTTTACTGTCTTGATCTTGGCCTTTCCAAAGC
TAGATTCTGTAGTGTAGTTCAGGAAAGGAAGGCTATTTTGAATCATAAATATGAGTTTAGCGATGGAATTTGAATTCCCCGGTTATCTACCTAGTAAAAGTCGCCTTTTT
TTTGTACCGTGTACCTTTTGAATTAATTAATAATAAATCTCTTTTTTAGGCG

Protein sequence

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MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPR
DIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

CSPI03G11230 (gene) of Cucumber (PI 183967) v1 genome