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CSPI03G11670 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G11670
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionAcidic leucine-rich nuclear phosphoprotein 32-related protein 2
Genome locationChr3:9053135..9054947
RNA-Seq ExpressionCSPI03G11670
SyntenyCSPI03G11670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049218.1 uncharacterized protein E6C27_scaffold171G004580 [Cucumis melo var. makuwa]1.4e-41100Show/hide
Query:  GDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
        GDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
Subjt:  GDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
KAG6582410.1 hypothetical protein SDJN03_22412, partial [Cucurbita argyrosperma subsp. sororia]2.3e-3686.02Show/hide
Query:  GDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
        GDS+ VNG  E+++DSAAAGEVGDH NGE+ SESNALLPPRRGGMSRK NKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE+DSCSC+IM
Subjt:  GDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
XP_004134046.1 uncharacterized protein LOC101205158 [Cucumis sativus]3.2e-46100Show/hide
Query:  MDIGDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
        MDIGDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
Subjt:  MDIGDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
XP_008438475.1 PREDICTED: uncharacterized protein LOC103483558 isoform X2 [Cucumis melo]1.4e-41100Show/hide
Query:  GDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
        GDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
Subjt:  GDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
XP_038897861.1 uncharacterized protein LOC120085750 [Benincasa hispida]4.8e-4295.7Show/hide
Query:  GDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
        GDSKDVNGCKEK MDSAA GEVGDHSNGEEYSESNALLPPRRGGMSRK NKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCSCIIM
Subjt:  GDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
TrEMBL top hitse value%identityAlignment
A0A0A0L701 Uncharacterized protein1.6e-46100Show/hide
Query:  MDIGDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
        MDIGDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
Subjt:  MDIGDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
A0A1S3AX40 uncharacterized protein LOC103483558 isoform X26.8e-42100Show/hide
Query:  GDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
        GDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
Subjt:  GDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
A0A5A7U1V8 Uncharacterized protein6.8e-42100Show/hide
Query:  GDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
        GDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
Subjt:  GDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
A0A6J1EBY1 uncharacterized protein LOC1114317931.1e-3686.02Show/hide
Query:  GDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
        GDS+ VNG  E+++DSAAAGEVGDH NGE+ SESNALLPPRRGGMSRK NKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE+DSCSC+IM
Subjt:  GDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
A0A6J1INK9 uncharacterized protein LOC1114791205.6e-3684.95Show/hide
Query:  GDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
        GDS+ VNG  E+++DSAAAGEVGDH N E+ SESNALLPPRRGGMSRK NKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE+DSCSC+IM
Subjt:  GDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G34010.1 unknown protein2.5e-0446.67Show/hide
Query:  RMKVRWNDSNGNNLAEILEFQPSDVSDSGDE----EADSCSCIIM
        R KV+W D+ G  +AE+ EF+PS+V +S DE       SC C IM
Subjt:  RMKVRWNDSNGNNLAEILEFQPSDVSDSGDE----EADSCSCIIM
AT1G55475.1 unknown protein2.5e-0444.19Show/hide
Query:  KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
        + + KV+W D  G  LAEI EF+PSD  D   +   +C CII+
Subjt:  KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
AT2G33390.1 unknown protein3.8e-2150.54Show/hide
Query:  GDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
        G+ K+ NGC+ K + S  + E+ D    EE SES  LLPPR+GGMSR  +K +  V+WND  G+NLAE+L ++PS+VSD+ D+++DSC C IM
Subjt:  GDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATTGGCGATTCTAAGGATGTTAATGGCTGTAAAGAGAAGACTATGGACTCTGCAGCTGCCGGAGAAGTTGGGGATCACAGTAACGGCGAAGAATACAGTGAATC
GAATGCCCTATTGCCGCCGCGCCGCGGTGGAATGTCGAGGAAATTGAATAAGCCGAGGATGAAAGTTCGGTGGAATGATAGTAATGGTAATAACCTAGCAGAGATTTTGG
AGTTTCAACCAAGTGACGTGAGCGACTCCGGTGACGAGGAGGCTGATTCTTGCAGCTGTATAATCATGTAG
mRNA sequenceShow/hide mRNA sequence
GTTATATTATGAAACACCCACTTTTTATTTTTTAATTTTGAAGATCTTTTCGATTTGGGTTTTGGTGTGGACTTGAGTTTCTGTCACTGTCTTTGGAATCTATCTATTCT
AATCCCTTCTTTTTTTTGTTTTGTTCATAGCTTTGTTTGCCTGAAATTTTAGATCGGGGGTTTTACTTTCCGAGAAGGGGTTTTTTTTTATGGGGTTGTTGGGTTCATAA
GTTTTTGAACCCGTGAGCGTTGACCCAGTTGTGAAATCGGAGTTTCGAGTGAGAATTTTTCATTGGGGGTTCAGATGAATTGGATTTCTGAGATGAGTCGATTCAGAAAT
CGCAAATCTGGGTCCGATTTTTGGTGTAGTTGATAGGGTAAAATTTCGATTGGATTTGTAGTTAGTGAGAGTTTTGAACTATGGATATTGGCGATTCTAAGGATGTTAAT
GGCTGTAAAGAGAAGACTATGGACTCTGCAGCTGCCGGAGAAGTTGGGGATCACAGTAACGGCGAAGAATACAGTGAATCGAATGCCCTATTGCCGCCGCGCCGCGGTGG
AATGTCGAGGAAATTGAATAAGCCGAGGATGAAAGTTCGGTGGAATGATAGTAATGGTAATAACCTAGCAGAGATTTTGGAGTTTCAACCAAGTGACGTGAGCGACTCCG
GTGACGAGGAGGCTGATTCTTGCAGCTGTATAATCATGTAGATTATTACATCAGATATTAGTATATAATGACAAGAACAATGTGGTTTCTTTACGACTAAACTGATAATA
ATTGGAGATGTTTCTGACTTTATACCGGATTGCTTTGCTGCTACGCCCACTGCCAGAAACGTTCAAAGATCGGTTCATTGATATGTCGTTACATCAAGCAGTTTCTGGCG
ATGTGTCCCAGTGACATCTTGTACTGTTTCGGTTTTTCAAATTAGTAAGATGACCTTCCAGGTGACAATATACTATATGGATGGATGATGCTGATATATATTGATATTAT
TAAATCAAACATTCAGATTAGTTGAGCTTTTGACAGTGCAAATGATACATTGTGTAATGCAAACACTTGGAATTTTTCATATACCCATCATGAATTCTAG
Protein sequenceShow/hide protein sequence
MDIGDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM