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CSPI03G12040 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G12040
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionEthylene-responsive transcription factor, putative
Genome locationChr3:9285981..9286382
RNA-Seq ExpressionCSPI03G12040
SyntenyCSPI03G12040
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily
IPR044808 - Ethylene-responsive transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049259.1 ethylene-responsive transcription factor ERF096 [Cucumis melo var. makuwa]2.4e-6092.03Show/hide
Query:  MDESGGRGRGYGDD-STGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRGGA----YSSGS
        MDESGGRGRG+GDD + GSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLT  G     YSSGS
Subjt:  MDESGGRGRGYGDD-STGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRGGA----YSSGS

Query:  SSSSSMSMRQNEVIEFEYLDDKVLEDLLDYGEESDKRS
        SSSSSMSMRQNEVIEFEYLDDKVLEDLLDYGEESDKRS
Subjt:  SSSSSMSMRQNEVIEFEYLDDKVLEDLLDYGEESDKRS

KAG6582379.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia]2.4e-5585.51Show/hide
Query:  MDESGGRGRGYGDDST---GSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRGGAYS--SGS
        MDESGGRGRGYG+DS+   GSREIRYRGVRRRPWGKFAAEIRDSRRQG+R+WLGTFNTAEEAARAYDRAAY+MRGHLAILNFPNEYPLT  GA    S S
Subjt:  MDESGGRGRGYGDDST---GSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRGGAYS--SGS

Query:  SSSSSMSMRQNEVIEFEYLDDKVLEDLLDYGEESDKRS
        S SSSMSMR NEVIEFEYLDDKVLEDLLD GEESDK++
Subjt:  SSSSSMSMRQNEVIEFEYLDDKVLEDLLDYGEESDKRS

XP_004134413.1 ethylene-responsive transcription factor 14 [Cucumis sativus]4.6e-67100Show/hide
Query:  MDESGGRGRGYGDDSTGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRGGAYSSGSSSSSS
        MDESGGRGRGYGDDSTGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRGGAYSSGSSSSSS
Subjt:  MDESGGRGRGYGDDSTGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRGGAYSSGSSSSSS

Query:  MSMRQNEVIEFEYLDDKVLEDLLDYGEESDKRS
        MSMRQNEVIEFEYLDDKVLEDLLDYGEESDKRS
Subjt:  MSMRQNEVIEFEYLDDKVLEDLLDYGEESDKRS

XP_008438537.1 PREDICTED: ethylene-responsive transcription factor ERF096 [Cucumis melo]2.1e-5991.3Show/hide
Query:  MDESGGRGRGYGDD-STGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRGGA----YSSGS
        MDESGGRGRG+GDD + GSREI YRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLT  G     YSSGS
Subjt:  MDESGGRGRGYGDD-STGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRGGA----YSSGS

Query:  SSSSSMSMRQNEVIEFEYLDDKVLEDLLDYGEESDKRS
        SSSSSMSMRQNEVIEFEYLDDKVLEDLLDYGEESDKRS
Subjt:  SSSSSMSMRQNEVIEFEYLDDKVLEDLLDYGEESDKRS

XP_038877364.1 ethylene-responsive transcription factor ERF096 [Benincasa hispida]3.5e-5990.14Show/hide
Query:  MDESGGRGRGYGDDST---GSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTR------GGAY
        MDESGGRGRGY +DST   GSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLT       GG Y
Subjt:  MDESGGRGRGYGDDST---GSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTR------GGAY

Query:  SSG-SSSSSSMSMRQNEVIEFEYLDDKVLEDLLDYGEESDKR
        SSG SSSSSSMSMRQNEVIEFEYLDDKVLEDLLDYGEESDKR
Subjt:  SSG-SSSSSSMSMRQNEVIEFEYLDDKVLEDLLDYGEESDKR

TrEMBL top hitse value%identityAlignment
A0A0A0L9V5 AP2/ERF domain-containing protein2.2e-67100Show/hide
Query:  MDESGGRGRGYGDDSTGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRGGAYSSGSSSSSS
        MDESGGRGRGYGDDSTGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRGGAYSSGSSSSSS
Subjt:  MDESGGRGRGYGDDSTGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRGGAYSSGSSSSSS

Query:  MSMRQNEVIEFEYLDDKVLEDLLDYGEESDKRS
        MSMRQNEVIEFEYLDDKVLEDLLDYGEESDKRS
Subjt:  MSMRQNEVIEFEYLDDKVLEDLLDYGEESDKRS

A0A1S3AW98 ethylene-responsive transcription factor ERF0961.0e-5991.3Show/hide
Query:  MDESGGRGRGYGDD-STGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRGGA----YSSGS
        MDESGGRGRG+GDD + GSREI YRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLT  G     YSSGS
Subjt:  MDESGGRGRGYGDD-STGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRGGA----YSSGS

Query:  SSSSSMSMRQNEVIEFEYLDDKVLEDLLDYGEESDKRS
        SSSSSMSMRQNEVIEFEYLDDKVLEDLLDYGEESDKRS
Subjt:  SSSSSMSMRQNEVIEFEYLDDKVLEDLLDYGEESDKRS

A0A5A7U6W8 Ethylene-responsive transcription factor ERF0961.2e-6092.03Show/hide
Query:  MDESGGRGRGYGDD-STGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRGGA----YSSGS
        MDESGGRGRG+GDD + GSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLT  G     YSSGS
Subjt:  MDESGGRGRGYGDD-STGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRGGA----YSSGS

Query:  SSSSSMSMRQNEVIEFEYLDDKVLEDLLDYGEESDKRS
        SSSSSMSMRQNEVIEFEYLDDKVLEDLLDYGEESDKRS
Subjt:  SSSSSMSMRQNEVIEFEYLDDKVLEDLLDYGEESDKRS

A0A6J1E9T0 ethylene-responsive transcription factor ERF096-like2.8e-5484.06Show/hide
Query:  MDESGGRGRGYGDD---STGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRGGAYS--SGS
        MDESGGRGRGY +D   + GSREIRYRGVRRRPWGKFAAEIRDSRRQG+R+WLGTFNTAEEAARAYDRAAY+MRGHLAILNFPNEYPLT  GA    S S
Subjt:  MDESGGRGRGYGDD---STGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRGGAYS--SGS

Query:  SSSSSMSMRQNEVIEFEYLDDKVLEDLLDYGEESDKRS
        S SSSMSMR NEVIEFEYLDDKVLEDLLD GEESDK++
Subjt:  SSSSSMSMRQNEVIEFEYLDDKVLEDLLDYGEESDKRS

A0A6J1IV86 ethylene-responsive transcription factor ERF0963.3e-5585.51Show/hide
Query:  MDESGGRGRGYGDDST---GSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRGGAYSSGSSS
        MDESGGRGRGY +DS+   GSREIRYRGVRRRPWGKFAAEIRDSRRQG+R+WLGTFNTAEEAARAYDRAAY+MRGHLAILNFPNEYPLT GG     SSS
Subjt:  MDESGGRGRGYGDDST---GSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRGGAYSSGSSS

Query:  --SSSMSMRQNEVIEFEYLDDKVLEDLLDYGEESDKRS
          SSSMSMR NEVIEFEYLDDKVLEDLLD GEESDK+S
Subjt:  --SSSMSMRQNEVIEFEYLDDKVLEDLLDYGEESDKRS

SwissProt top hitse value%identityAlignment
A0A3Q7I5Y9 Ethylene-response factor C33.9e-2148.78Show/hide
Query:  REIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFP--------NEYPLTRGG----------AYSSGSSSSSS
        ++  YRGVR+RPWGK+AAEIRDS R GVR+WLGTF+ AEEAA AYD+AA+ MRG +AILNFP        NE      G           YS    S S 
Subjt:  REIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFP--------NEYPLTRGG----------AYSSGSSSSSS

Query:  MSMRQNEVIEFEYLDDKVLEDLL
         +  + +V+ FE L  + LE+LL
Subjt:  MSMRQNEVIEFEYLDDKVLEDLL

P93822 Ethylene-responsive transcription factor 142.8e-3560.47Show/hide
Query:  ESGGRGRGYGDDSTGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRGGAYSSGSSSSSSMS
        + GGR  G G    G+ + +YRGVRRRPWGK+AAEIRDSR+ G R+WLGTF+TAE+AARAYDRAAY+MRG  AILNFP+EY +  G + ++ +SSSSS  
Subjt:  ESGGRGRGYGDDSTGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRGGAYSSGSSSSSSMS

Query:  MRQNEVIEFEYLDDKVLEDLLDYGEESDK
            +V EFEYLDD VL++LL+YGE  +K
Subjt:  MRQNEVIEFEYLDDKVLEDLLDYGEESDK

Q9LSX0 Ethylene-responsive transcription factor ERF0963.1e-3458.65Show/hide
Query:  ESGGRGRGYGDDSTGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRG----GAYSSGSSSS
        + GGRG        G+   +YRGVRRRPWGK+AAEIRDSR+ G R+WLGTF+TAEEAARAYD+AAY+MRG  AILNFP+EY +  G     A +  SS+S
Subjt:  ESGGRGRGYGDDSTGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRG----GAYSSGSSSS

Query:  SSMSMRQNEVIEFEYLDDKVLEDLLDYGEESDK
        +S S    +V EFEYLDD VLE+LL+ GE+ +K
Subjt:  SSMSMRQNEVIEFEYLDDKVLEDLLDYGEESDK

Q9LTC5 Ethylene-responsive transcription factor ERF0988.2e-3562.6Show/hide
Query:  RGYGDDSTGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEY-----PLTRGGAYSSGSSSSSSMS-
        R   + S   ++ R+RGVRRRPWGKFAAEIRD  R G R+WLGTF TAEEAARAYDRAA+N+RGHLAILNFPNEY       +    Y+S SSSSSS S 
Subjt:  RGYGDDSTGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEY-----PLTRGGAYSSGSSSSSSMS-

Query:  ------MRQNEVIEFEYLDDKVLEDLLDYGE
                Q EV EFEYLDDKVLE+LLD  E
Subjt:  ------MRQNEVIEFEYLDDKVLEDLLDYGE

Q9LTC6 Ethylene-responsive transcription factor ERF0953.1e-3459.84Show/hide
Query:  DSTGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRGGAYSS--GSSSSSSMSMR-------
        +S  + E++YRGVR+RPWGK+AAEIRDS R G R+WLGTFNTAE+AARAYDRAA+ MRG  AILNFP+EY + + G   S   + +SSS   R       
Subjt:  DSTGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRGGAYSS--GSSSSSSMSMR-------

Query:  QNEVIEFEYLDDKVLEDLLDYGEESDK
          EVIEFEYLDD +LE+LLDYGE S++
Subjt:  QNEVIEFEYLDDKVLEDLLDYGEESDK

Arabidopsis top hitse value%identityAlignment
AT1G04370.1 Ethylene-responsive element binding factor 142.0e-3660.47Show/hide
Query:  ESGGRGRGYGDDSTGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRGGAYSSGSSSSSSMS
        + GGR  G G    G+ + +YRGVRRRPWGK+AAEIRDSR+ G R+WLGTF+TAE+AARAYDRAAY+MRG  AILNFP+EY +  G + ++ +SSSSS  
Subjt:  ESGGRGRGYGDDSTGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRGGAYSSGSSSSSSMS

Query:  MRQNEVIEFEYLDDKVLEDLLDYGEESDK
            +V EFEYLDD VL++LL+YGE  +K
Subjt:  MRQNEVIEFEYLDDKVLEDLLDYGEESDK

AT3G23220.1 Integrase-type DNA-binding superfamily protein2.2e-3559.84Show/hide
Query:  DSTGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRGGAYSS--GSSSSSSMSMR-------
        +S  + E++YRGVR+RPWGK+AAEIRDS R G R+WLGTFNTAE+AARAYDRAA+ MRG  AILNFP+EY + + G   S   + +SSS   R       
Subjt:  DSTGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRGGAYSS--GSSSSSSMSMR-------

Query:  QNEVIEFEYLDDKVLEDLLDYGEESDK
          EVIEFEYLDD +LE+LLDYGE S++
Subjt:  QNEVIEFEYLDDKVLEDLLDYGEESDK

AT3G23230.1 Integrase-type DNA-binding superfamily protein5.8e-3662.6Show/hide
Query:  RGYGDDSTGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEY-----PLTRGGAYSSGSSSSSSMS-
        R   + S   ++ R+RGVRRRPWGKFAAEIRD  R G R+WLGTF TAEEAARAYDRAA+N+RGHLAILNFPNEY       +    Y+S SSSSSS S 
Subjt:  RGYGDDSTGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEY-----PLTRGGAYSSGSSSSSSMS-

Query:  ------MRQNEVIEFEYLDDKVLEDLLDYGE
                Q EV EFEYLDDKVLE+LLD  E
Subjt:  ------MRQNEVIEFEYLDDKVLEDLLDYGE

AT5G43410.1 Integrase-type DNA-binding superfamily protein2.2e-3558.65Show/hide
Query:  ESGGRGRGYGDDSTGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRG----GAYSSGSSSS
        + GGRG        G+   +YRGVRRRPWGK+AAEIRDSR+ G R+WLGTF+TAEEAARAYD+AAY+MRG  AILNFP+EY +  G     A +  SS+S
Subjt:  ESGGRGRGYGDDSTGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRG----GAYSSGSSSS

Query:  SSMSMRQNEVIEFEYLDDKVLEDLLDYGEESDK
        +S S    +V EFEYLDD VLE+LL+ GE+ +K
Subjt:  SSMSMRQNEVIEFEYLDDKVLEDLLDYGEESDK

AT5G47220.1 ethylene responsive element binding factor 22.4e-2146.83Show/hide
Query:  TGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNF--------PNEYPLTRGGAYSSGSSSSSSMSMRQNE
        T  +   YRGVR+RPWGKFAAEIRD  + G R+WLGTF TAE+AA AYD AA+ MRG  A+LNF        P+   +T   + SS SSSSSS S  +N 
Subjt:  TGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNF--------PNEYPLTRGGAYSSGSSSSSSMSMRQNE

Query:  VI----EFEYLDDKVLEDLLDYGEES
         +    + E L  +V++   + G+E+
Subjt:  VI----EFEYLDDKVLEDLLDYGEES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGAGAGTGGTGGTCGTGGAAGAGGTTATGGGGACGACTCCACAGGCAGCAGAGAGATTCGTTACCGGGGAGTACGACGTCGGCCATGGGGAAAATTCGCTGCTGA
AATACGAGACTCTAGAAGGCAAGGAGTACGGATATGGCTAGGGACTTTCAACACTGCAGAAGAAGCAGCACGAGCTTACGATCGAGCGGCCTACAACATGAGGGGTCATT
TGGCCATTTTGAATTTTCCTAATGAATATCCGCTTACCAGGGGTGGGGCTTATTCGAGTGGGTCATCTTCTTCTTCTTCAATGTCAATGCGGCAAAATGAAGTGATTGAA
TTTGAGTATTTGGATGATAAAGTGCTGGAAGATCTTCTTGACTATGGAGAAGAAAGTGATAAGAGAAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACGAGAGTGGTGGTCGTGGAAGAGGTTATGGGGACGACTCCACAGGCAGCAGAGAGATTCGTTACCGGGGAGTACGACGTCGGCCATGGGGAAAATTCGCTGCTGA
AATACGAGACTCTAGAAGGCAAGGAGTACGGATATGGCTAGGGACTTTCAACACTGCAGAAGAAGCAGCACGAGCTTACGATCGAGCGGCCTACAACATGAGGGGTCATT
TGGCCATTTTGAATTTTCCTAATGAATATCCGCTTACCAGGGGTGGGGCTTATTCGAGTGGGTCATCTTCTTCTTCTTCAATGTCAATGCGGCAAAATGAAGTGATTGAA
TTTGAGTATTTGGATGATAAAGTGCTGGAAGATCTTCTTGACTATGGAGAAGAAAGTGATAAGAGAAGCTAA
Protein sequenceShow/hide protein sequence
MDESGGRGRGYGDDSTGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTRGGAYSSGSSSSSSMSMRQNEVIE
FEYLDDKVLEDLLDYGEESDKRS