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CSPI03G12230 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G12230
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr3:9353339..9354108
RNA-Seq ExpressionCSPI03G12230
SyntenyCSPI03G12230
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAT96612.1 hypothetical protein VIGAN_08357900 [Vigna angularis var. angularis]1.5e-1142.62Show/hide
Query:  LTHVNDTFIASHENVIVAEGENETGGGGVAGDSGDGGHGEREKGGDDWLENVDHVDYAVSSGGFGGGSLGPGKVEAVGEETAMGSGEKDRTASGLGFDLG
        L HV D  +A+HE+V+V E EN +  G V GDSGDGG G+ E+ G+D  + V H   A +     G    P +VE + EE+A+G G++      LG DLG
Subjt:  LTHVNDTFIASHENVIVAEGENETGGGGVAGDSGDGGHGEREKGGDDWLENVDHVDYAVSSGGFGGGSLGPGKVEAVGEETAMGSGEKDRTASGLGFDLG

Query:  KKGNEGGNESWANPVLVVAGEG
        + G EGG E     VL VA  G
Subjt:  KKGNEGGNESWANPVLVVAGEG
CBI23584.3 unnamed protein product, partial [Vitis vinifera]5.1e-0458.7Show/hide
Query:  SGGFGGGSLGPGKVEAVGEETAMGSGEKDRTASGLGFDLGKKGNEG
        SGG G G LGPG+V+AVGEE ++G G++ R  SGLGF+L K G++G
Subjt:  SGGFGGGSLGPGKVEAVGEETAMGSGEKDRTASGLGFDLGKKGNEG
TrEMBL top hitse value%identityAlignment
A0A0S3SUR8 Uncharacterized protein7.1e-1242.62Show/hide
Query:  LTHVNDTFIASHENVIVAEGENETGGGGVAGDSGDGGHGEREKGGDDWLENVDHVDYAVSSGGFGGGSLGPGKVEAVGEETAMGSGEKDRTASGLGFDLG
        L HV D  +A+HE+V+V E EN +  G V GDSGDGG G+ E+ G+D  + V H   A +     G    P +VE + EE+A+G G++      LG DLG
Subjt:  LTHVNDTFIASHENVIVAEGENETGGGGVAGDSGDGGHGEREKGGDDWLENVDHVDYAVSSGGFGGGSLGPGKVEAVGEETAMGSGEKDRTASGLGFDLG

Query:  KKGNEGGNESWANPVLVVAGEG
        + G EGG E     VL VA  G
Subjt:  KKGNEGGNESWANPVLVVAGEG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAATTTTGATGCAGATTGGATTTCCATTTCACATACCATTTCAAAGGAAAACTGTCATAGAATTTTCACCCAGAAAACTGACCTCACTCATGTAAATGACACCTT
TATCGCGTCTCATGAGAACGTAATCGTGGCAGAGGGCGAGAATGAAACCGGCGGCGGCGGCGTGGCCGGAGATAGCGGCGATGGTGGGCATGGGGAGAGAGAGAAGGGCG
GCGACGATTGGCTTGAAAATGTGGACCATGTGGACTATGCGGTCTCTAGCGGCGGATTTGGAGGGGGCAGTTTGGGCCCAGGGAAGGTCGAAGCCGTTGGAGAAGAAACG
GCCATGGGAAGTGGTGAGAAGGACAGAACCGCGAGTGGCTTGGGATTTGATTTGGGCAAGAAGGGAAATGAAGGTGGAAATGAAAGTTGGGCCAATCCAGTGCTCGTTGT
CGCCGGTGAGGGTGAGAATGAACAGACTGCCACGCTTCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTAATTTTGATGCAGATTGGATTTCCATTTCACATACCATTTCAAAGGAAAACTGTCATAGAATTTTCACCCAGAAAACTGACCTCACTCATGTAAATGACACCTT
TATCGCGTCTCATGAGAACGTAATCGTGGCAGAGGGCGAGAATGAAACCGGCGGCGGCGGCGTGGCCGGAGATAGCGGCGATGGTGGGCATGGGGAGAGAGAGAAGGGCG
GCGACGATTGGCTTGAAAATGTGGACCATGTGGACTATGCGGTCTCTAGCGGCGGATTTGGAGGGGGCAGTTTGGGCCCAGGGAAGGTCGAAGCCGTTGGAGAAGAAACG
GCCATGGGAAGTGGTGAGAAGGACAGAACCGCGAGTGGCTTGGGATTTGATTTGGGCAAGAAGGGAAATGAAGGTGGAAATGAAAGTTGGGCCAATCCAGTGCTCGTTGT
CGCCGGTGAGGGTGAGAATGAACAGACTGCCACGCTTCTCTAGAGTGCACATGTCGTCGGGGGGTGACGGTATTTTAGAAACAAAGTTATAAATAAAGAAGAGGGAGGGA
GGAGAAAAGGGCACGCATTTCGAAATTGGCTCTTAGAAGATCAGTTGAGAACAAAGTAAAAATCGAACTTTATAGAATCATTAAAATTATTATGATTATGTTATGGATAT
GGTATATAAAATTGGTTGGTCAAAGAATATG
Protein sequenceShow/hide protein sequence
MINFDADWISISHTISKENCHRIFTQKTDLTHVNDTFIASHENVIVAEGENETGGGGVAGDSGDGGHGEREKGGDDWLENVDHVDYAVSSGGFGGGSLGPGKVEAVGEET
AMGSGEKDRTASGLGFDLGKKGNEGGNESWANPVLVVAGEGENEQTATLL