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CSPI03G12280 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G12280
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionC2H2-type domain-containing protein
Genome locationChr3:9400339..9400858
RNA-Seq ExpressionCSPI03G12280
SyntenyCSPI03G12280
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650335.1 hypothetical protein Csa_010297 [Cucumis sativus]9.5e-94100Show/hide
Query:  MDFGKQGSWDSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSY
        MDFGKQGSWDSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSY
Subjt:  MDFGKQGSWDSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSY

Query:  YNHPPPPSYRMYFDTAATNFPIHPQITSPAVVNQELLGANLSLEIDQTRGVSWKNEELDLELRLGHEYR
        YNHPPPPSYRMYFDTAATNFPIHPQITSPAVVNQELLGANLSLEIDQTRGVSWKNEELDLELRLGHEYR
Subjt:  YNHPPPPSYRMYFDTAATNFPIHPQITSPAVVNQELLGANLSLEIDQTRGVSWKNEELDLELRLGHEYR

XP_004134420.3 zinc finger protein 10 [Cucumis sativus]9.5e-94100Show/hide
Query:  MDFGKQGSWDSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSY
        MDFGKQGSWDSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSY
Subjt:  MDFGKQGSWDSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSY

Query:  YNHPPPPSYRMYFDTAATNFPIHPQITSPAVVNQELLGANLSLEIDQTRGVSWKNEELDLELRLGHEYR
        YNHPPPPSYRMYFDTAATNFPIHPQITSPAVVNQELLGANLSLEIDQTRGVSWKNEELDLELRLGHEYR
Subjt:  YNHPPPPSYRMYFDTAATNFPIHPQITSPAVVNQELLGANLSLEIDQTRGVSWKNEELDLELRLGHEYR

XP_008439363.1 PREDICTED: zinc finger protein 7 [Cucumis melo]1.3e-8795.29Show/hide
Query:  MDFGKQGSWDSSSDEYESQD-HVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPS
        MDFGKQGSWDSSSDEYE QD H+HLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPS
Subjt:  MDFGKQGSWDSSSDEYESQD-HVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPS

Query:  YYNHPPPPSYRMYFDTAATNFPIHPQITSPAVVNQELLGANLSLEIDQTRGVSWKNEELDLELRLGHEYR
        YY+HPPPPSYRMYFDTAATNFPIHPQITSPAVVNQELLGANLSL+IDQ RGV W NEELDLELRLGHEYR
Subjt:  YYNHPPPPSYRMYFDTAATNFPIHPQITSPAVVNQELLGANLSLEIDQTRGVSWKNEELDLELRLGHEYR

XP_022979419.1 zinc finger protein 11-like [Cucurbita maxima]2.4e-6075.57Show/hide
Query:  MDFGKQGSWDSSSDEYE----SQDHVHLKDDDN-ENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQP
        MDFGKQGS DSSSDEY+     Q H H     + +NDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAK KHRNF HSSSS+  ++DQ FPP + TQP
Subjt:  MDFGKQGSWDSSSDEYE----SQDHVHLKDDDN-ENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQP

Query:  TTPSYYNHPPPP--SYRMYFDTAATNFPIHPQITSPAVVNQELLGANLSLEIDQTRGVSWKNEELDLELRLGHEYR
          P YY  PP P  SYRMYFDTAATNFPIHPQI SP VVNQEL GANLSL+IDQTRGV W+NEE+DLELRLGHEYR
Subjt:  TTPSYYNHPPPP--SYRMYFDTAATNFPIHPQITSPAVVNQELLGANLSLEIDQTRGVSWKNEELDLELRLGHEYR

XP_038877191.1 zinc finger protein 7-like [Benincasa hispida]1.8e-7689.41Show/hide
Query:  MDFGKQGSWDSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHS-NHDQFFPPIIPTQPTTPS
        MDFGKQGSWDSSSDEYE QDH HLKDDD ENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSS+HS ++DQFFPP IPTQP TPS
Subjt:  MDFGKQGSWDSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHS-NHDQFFPPIIPTQPTTPS

Query:  YYNHPPPPSYRMYFDTAATNFPIHPQITSPAVVNQELLGANLSLEIDQTRGVSWKNEELDLELRLGHEYR
        YY  PPPPSYRMYFDTAA NFPIHPQI SP VVNQ+LLGANLSL+IDQ RGV WKNEELDLELRLGHEYR
Subjt:  YYNHPPPPSYRMYFDTAATNFPIHPQITSPAVVNQELLGANLSLEIDQTRGVSWKNEELDLELRLGHEYR

TrEMBL top hitse value%identityAlignment
A0A0A0L4H6 C2H2-type domain-containing protein4.5e-81100Show/hide
Query:  MDFGKQGSWDSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSY
        MDFGKQGSWDSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSY
Subjt:  MDFGKQGSWDSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSY

Query:  YNHPPPPSYRMYFDTAATNFPIHPQITSPAVVNQELLGANLSLEIDQTR
        YNHPPPPSYRMYFDTAATNFPIHPQITSPAVVNQELLGANLSLEIDQTR
Subjt:  YNHPPPPSYRMYFDTAATNFPIHPQITSPAVVNQELLGANLSLEIDQTR

A0A1S3AZA2 zinc finger protein 76.4e-8895.29Show/hide
Query:  MDFGKQGSWDSSSDEYESQD-HVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPS
        MDFGKQGSWDSSSDEYE QD H+HLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPS
Subjt:  MDFGKQGSWDSSSDEYESQD-HVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPS

Query:  YYNHPPPPSYRMYFDTAATNFPIHPQITSPAVVNQELLGANLSLEIDQTRGVSWKNEELDLELRLGHEYR
        YY+HPPPPSYRMYFDTAATNFPIHPQITSPAVVNQELLGANLSL+IDQ RGV W NEELDLELRLGHEYR
Subjt:  YYNHPPPPSYRMYFDTAATNFPIHPQITSPAVVNQELLGANLSLEIDQTRGVSWKNEELDLELRLGHEYR

A0A6J1DD81 zinc finger protein 8-like1.1e-5272.16Show/hide
Query:  MDFGKQGSWDSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSY
        MDFGKQGSWDSSSDEY  QD V     D  +DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK RN I SSSS HS HDQ FPPI P      SY
Subjt:  MDFGKQGSWDSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSY

Query:  YNHPPPP------SYRMYFD-TAATNFPIHPQITSPAVVNQELLGANLSLEIDQTRGVSWKNEELDLELRLGHEYR
        Y  PPPP      +YRMYFD TAA N+PIH   +  A  N++LLGANL+L+IDQTRGV WKNEELDLELRLGHEYR
Subjt:  YNHPPPP------SYRMYFD-TAATNFPIHPQITSPAVVNQELLGANLSLEIDQTRGVSWKNEELDLELRLGHEYR

A0A6J1E9V2 transcriptional regulator SUPERMAN-like1.3e-5974.57Show/hide
Query:  MDFGKQGSWDSSSDEYE---SQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTT
        MDFGKQG+ DSSSDEY+    Q H H      +NDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAK KHRNF HSSSS+  ++DQ FPP + TQP  
Subjt:  MDFGKQGSWDSSSDEYE---SQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTT

Query:  PSYYNHP-PPPSYRMYFDTAATNFPIHPQITSPAVVNQELLGANLSLEIDQTRGVSWKNEELDLELRLGHEYR
        P Y   P PP SYRMYFDT+ATNFPIHPQI SP V NQELLGA+LSL+IDQTRGV W+NEE+DLELRLGHEYR
Subjt:  PSYYNHP-PPPSYRMYFDTAATNFPIHPQITSPAVVNQELLGANLSLEIDQTRGVSWKNEELDLELRLGHEYR

A0A6J1IWL0 zinc finger protein 11-like1.1e-6075.57Show/hide
Query:  MDFGKQGSWDSSSDEYE----SQDHVHLKDDDN-ENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQP
        MDFGKQGS DSSSDEY+     Q H H     + +NDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAK KHRNF HSSSS+  ++DQ FPP + TQP
Subjt:  MDFGKQGSWDSSSDEYE----SQDHVHLKDDDN-ENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQP

Query:  TTPSYYNHPPPP--SYRMYFDTAATNFPIHPQITSPAVVNQELLGANLSLEIDQTRGVSWKNEELDLELRLGHEYR
          P YY  PP P  SYRMYFDTAATNFPIHPQI SP VVNQEL GANLSL+IDQTRGV W+NEE+DLELRLGHEYR
Subjt:  TTPSYYNHPPPP--SYRMYFDTAATNFPIHPQITSPAVVNQELLGANLSLEIDQTRGVSWKNEELDLELRLGHEYR

SwissProt top hitse value%identityAlignment
P93751 Zinc finger protein 81.7e-0540Show/hide
Query:  DSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHD
        D SS+  + +D    KD D +N+  +R +EC +C R F  +QALGGH N H+++R  AK R  + S    H  HD
Subjt:  DSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHD

Q38895 Transcriptional regulator SUPERMAN9.2e-0747.89Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSYYNHPPP
        R Y C+FCKR F +AQALGGHMN+HR+DRA+ + +    SSSST S      PP      +  +  N PPP
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSYYNHPPP

Q9LHS9 Probable transcriptional regulator RABBIT EARS2.4e-0755.56Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHDQFFPP
        R Y C+FC R F +AQALGGHMN+HR+DRA+ K ++   S SST    DQ  PP
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHDQFFPP

Q9SLB8 Zinc finger protein 111.6e-0667.74Show/hide
Query:  YECTFCKRGFTNAQALGGHMNIHRKDRAKAK
        Y C+FC+R F +AQALGGHMN+HR+DRAK +
Subjt:  YECTFCKRGFTNAQALGGHMNIHRKDRAKAK

Q9SR34 Transcriptional regulator TAC12.8e-0850.82Show/hide
Query:  DSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHR
        D  SD      H  + D  N++    R Y C+FC RGF+NAQALGGHMNIHR+DRAK + +
Subjt:  DSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHR

Arabidopsis top hitse value%identityAlignment
AT3G09290.1 telomerase activator12.0e-0950.82Show/hide
Query:  DSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHR
        D  SD      H  + D  N++    R Y C+FC RGF+NAQALGGHMNIHR+DRAK + +
Subjt:  DSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHR

AT3G23140.1 C2H2 and C2HC zinc fingers superfamily protein3.5e-0936.63Show/hide
Query:  DDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSYYNHPPP--PSYRMYFDTAATNFPIH
        D  + +   +R Y+C  CKRGFTN QALGGH NIHR++R +       + SSS+ S+   F  P+    P++ + + +PPP  P+   Y    +   PI+
Subjt:  DDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSYYNHPPP--PSYRMYFDTAATNFPIH

Query:  P
        P
Subjt:  P

AT3G53820.1 C2H2 and C2HC zinc fingers superfamily protein4.8e-1169.05Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSS
        RPY C FC+RGF+NAQALGGHMNIHRKDRAK +  N     S
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSS

AT4G17810.1 C2H2 and C2HC zinc fingers superfamily protein5.0e-0831.68Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK-HRNFIHSSSSTHSNHDQFFPPIIPTQPTTP-------------SYYNHPPPPS---------YRMY
        R Y C FC+R F +AQALGGHMN+HR+DRA ++ H+    ++++   +         P  PTT              S++     PS           +Y
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK-HRNFIHSSSSTHSNHDQFFPPIIPTQPTTP-------------SYYNHPPPPS---------YRMY

Query:  FDTA--ATNFPIHPQITSPAVVNQELL----GANLSL-EIDQTRGVSWKNEELDLELRLGH
          T+   +N P    + SP  V   L+    G + S+  + +  G S   +ELDLELRLGH
Subjt:  FDTA--ATNFPIHPQITSPAVVNQELL----GANLSL-EIDQTRGVSWKNEELDLELRLGH

AT5G43540.1 C2H2 and C2HC zinc fingers superfamily protein7.4e-1282.05Show/hide
Query:  TKRPYECTFCKRGFTNAQALGGHMNIHRKDRA-KAKHRN
        T+R YECTFCKRGFTNAQALGGHMNIHR+DR  KAK +N
Subjt:  TKRPYECTFCKRGFTNAQALGGHMNIHRKDRA-KAKHRN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTTGGAAAACAGGGGAGTTGGGACAGTTCAAGTGATGAATATGAATCACAAGATCATGTTCATCTCAAAGACGACGACAATGAAAATGACCCAACAAAACGTCC
TTACGAGTGCACTTTTTGTAAGCGTGGGTTCACTAATGCTCAAGCTCTTGGTGGTCATATGAACATCCACCGCAAAGACCGAGCCAAAGCTAAACATCGTAATTTTATTC
ATTCCTCTTCTTCAACTCATTCTAATCATGACCAATTTTTCCCTCCTATTATTCCAACTCAACCAACAACTCCTTCTTATTACAACCACCCCCCTCCCCCCTCTTACCGG
ATGTACTTCGACACAGCCGCCACTAACTTCCCTATTCATCCACAGATCACATCCCCCGCCGTCGTTAATCAAGAACTTCTCGGAGCTAATCTCAGCCTTGAAATTGATCA
AACCAGAGGTGTCAGCTGGAAAAATGAAGAACTCGATTTGGAGCTTCGACTTGGCCATGAATATCGCTGA
mRNA sequenceShow/hide mRNA sequence
GGGTTTCTGCATGGATTTTGGAAAACAGGGGAGTTGGGACAGTTCAAGTGATGAATATGAATCACAAGATCATGTTCATCTCAAAGACGACGACAATGAAAATGACCCAA
CAAAACGTCCTTACGAGTGCACTTTTTGTAAGCGTGGGTTCACTAATGCTCAAGCTCTTGGTGGTCATATGAACATCCACCGCAAAGACCGAGCCAAAGCTAAACATCGT
AATTTTATTCATTCCTCTTCTTCAACTCATTCTAATCATGACCAATTTTTCCCTCCTATTATTCCAACTCAACCAACAACTCCTTCTTATTACAACCACCCCCCTCCCCC
CTCTTACCGGATGTACTTCGACACAGCCGCCACTAACTTCCCTATTCATCCACAGATCACATCCCCCGCCGTCGTTAATCAAGAACTTCTCGGAGCTAATCTCAGCCTTG
AAATTGATCAAACCAGAGGTGTCAGCTGGAAAAATGAAGAACTCGATTTGGAGCTTCGACTTGGCCATGAATATCGCTGA
Protein sequenceShow/hide protein sequence
MDFGKQGSWDSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSYYNHPPPPSYR
MYFDTAATNFPIHPQITSPAVVNQELLGANLSLEIDQTRGVSWKNEELDLELRLGHEYR