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CSPI03G12380 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G12380
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr3:9456270..9456830
RNA-Seq ExpressionCSPI03G12380
SyntenyCSPI03G12380
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049291.1 putative transmembrane protein [Cucumis melo var. makuwa]1.1e-3992.39Show/hide
Query:  LLLLLQLQPNLAGRTLHEKPPMVRRMELNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAANHSTQRPSTHRRYAAPARVVQNLV
        +LLLLQLQPNLAGRTLHEKPPMVRRMELNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHY A  ST+RPSTHRR+AAPARVVQ LV
Subjt:  LLLLLQLQPNLAGRTLHEKPPMVRRMELNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAANHSTQRPSTHRRYAAPARVVQNLV

KAG6597386.1 hypothetical protein SDJN03_10566, partial [Cucurbita argyrosperma subsp. sororia]9.2e-3175.76Show/hide
Query:  MAILLLLLQLQPNLAGRTLHEKPPMVRR----MELNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAANHSTQRPSTHRRYAAPARVVQNLV
        MA +L+LLQL PN AGRTL EKP MVRR    MEL LKLQSLQRV VPPSGPSGCTFIPGTNGPGCPL+ RHYA N S QRPST RRYA P RVV+ L+
Subjt:  MAILLLLLQLQPNLAGRTLHEKPPMVRR----MELNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAANHSTQRPSTHRRYAAPARVVQNLV

KAG7018772.1 hypothetical protein SDJN02_20645, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-2581.08Show/hide
Query:  LQPNLAGRTLHEKPPMVRRME--LNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAANHSTQRPSTH
        L PN+AGRTLHE P MVRR E  L LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCP K RHY  NHST+RPS H
Subjt:  LQPNLAGRTLHEKPPMVRRME--LNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAANHSTQRPSTH

KGN56901.1 hypothetical protein Csa_009866 [Cucumis sativus]6.6e-4598.95Show/hide
Query:  MAILLLLLQLQPNLAGRTLHEKPPMVRRMELNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAANHSTQRPSTHRRYAAPARVVQNLV
        MAILLLLLQLQPNLAGRTLHEKPPMVRRMELNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHY ANHSTQRPSTHRRYAAPARVVQNLV
Subjt:  MAILLLLLQLQPNLAGRTLHEKPPMVRRMELNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAANHSTQRPSTHRRYAAPARVVQNLV

TYK17267.1 putative transmembrane protein [Cucumis melo var. makuwa]1.9e-4493.27Show/hide
Query:  MKFLHTALAMAILLLLLQLQPNLAGRTLHEKPPMVRRMELNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAANHSTQRPSTHRRYAAPARVV
        MKFLHTALAMAI LLLLQLQPNLAGRTLHEKPPMVRRMELNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHY A  ST+RPSTHRR+AAPARVV
Subjt:  MKFLHTALAMAILLLLLQLQPNLAGRTLHEKPPMVRRMELNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAANHSTQRPSTHRRYAAPARVV

Query:  QNLV
        Q LV
Subjt:  QNLV

TrEMBL top hitse value%identityAlignment
A0A0A0LA00 Uncharacterized protein3.2e-4598.95Show/hide
Query:  MAILLLLLQLQPNLAGRTLHEKPPMVRRMELNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAANHSTQRPSTHRRYAAPARVVQNLV
        MAILLLLLQLQPNLAGRTLHEKPPMVRRMELNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHY ANHSTQRPSTHRRYAAPARVVQNLV
Subjt:  MAILLLLLQLQPNLAGRTLHEKPPMVRRMELNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAANHSTQRPSTHRRYAAPARVVQNLV

A0A5A7U6N3 Putative transmembrane protein5.3e-4092.39Show/hide
Query:  LLLLLQLQPNLAGRTLHEKPPMVRRMELNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAANHSTQRPSTHRRYAAPARVVQNLV
        +LLLLQLQPNLAGRTLHEKPPMVRRMELNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHY A  ST+RPSTHRR+AAPARVVQ LV
Subjt:  LLLLLQLQPNLAGRTLHEKPPMVRRMELNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAANHSTQRPSTHRRYAAPARVVQNLV

A0A5D3CZY7 Putative transmembrane protein9.3e-4593.27Show/hide
Query:  MKFLHTALAMAILLLLLQLQPNLAGRTLHEKPPMVRRMELNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAANHSTQRPSTHRRYAAPARVV
        MKFLHTALAMAI LLLLQLQPNLAGRTLHEKPPMVRRMELNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHY A  ST+RPSTHRR+AAPARVV
Subjt:  MKFLHTALAMAILLLLLQLQPNLAGRTLHEKPPMVRRMELNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAANHSTQRPSTHRRYAAPARVV

Query:  QNLV
        Q LV
Subjt:  QNLV

W9QW23 Uncharacterized protein4.2e-1350Show/hide
Query:  MKFLHTALAMAILLLLLQLQPNLAGRTLHE-KPPMVRRMELNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAANHSTQRP
        M  L+ ALA+ +LL+L+  + + A R L++ K  +V+  +L L  QSL R  VPPSGPSGCT+IPG+ GP CPL E+HYA +H+T  P
Subjt:  MKFLHTALAMAILLLLLQLQPNLAGRTLHE-KPPMVRRMELNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAANHSTQRP

W9R3U7 Uncharacterized protein3.6e-1248.86Show/hide
Query:  MKFLHTALAMAILLLLLQLQPNLAGRTLHE-KPPMVRRMELNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAANHSTQRP
        M  L+ ALA+ +LL+L+  + + A R L++ K  +V+  +L L  QSL R  VPPSG SGCT+IPG+ GP CPL E+HYA +H+T  P
Subjt:  MKFLHTALAMAILLLLLQLQPNLAGRTLHE-KPPMVRRMELNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAANHSTQRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTTCTCCATACAGCTCTAGCAATGGCTATCCTTCTTCTTCTTTTGCAGCTTCAGCCAAATTTAGCTGGTAGGACTCTGCATGAGAAGCCACCAATGGTGAGAAG
AATGGAGCTGAACCTGAAGCTGCAGTCTCTTCAGAGAGTCAGCGTACCGCCCTCTGGCCCTTCCGGTTGCACCTTCATTCCTGGCACCAACGGCCCCGGATGTCCTCTGA
AAGAGAGGCACTATGCTGCCAACCATTCCACTCAGCGTCCTAGCACTCACCGACGCTATGCTGCCCCTGCTCGTGTCGTGCAGAATCTGGTCTGA
mRNA sequenceShow/hide mRNA sequence
TAAACTTGTCGAAAAGGAAAGAAAAAAAACAGAAACAAAAGGTGGCAAGAAATATGAAATTTCTCCATACAGCTCTAGCAATGGCTATCCTTCTTCTTCTTTTGCAGCTT
CAGCCAAATTTAGCTGGTAGGACTCTGCATGAGAAGCCACCAATGGTGAGAAGAATGGAGCTGAACCTGAAGCTGCAGTCTCTTCAGAGAGTCAGCGTACCGCCCTCTGG
CCCTTCCGGTTGCACCTTCATTCCTGGCACCAACGGCCCCGGATGTCCTCTGAAAGAGAGGCACTATGCTGCCAACCATTCCACTCAGCGTCCTAGCACTCACCGACGCT
ATGCTGCCCCTGCTCGTGTCGTGCAGAATCTGGTCTGAAGTTTTGATATTCATCTTTTTCCTACTTCCATTCATAATCCAGAAGAGTTGGATTATTTTGGCCCTTGGATA
CTTGGAAGCTAGAAAGGCAGTTGCACGTTTTGTAACATATTGAATTCATTGCAATATTGTTTTGTTATTTGTGTCCTTATTTGTAAATAATGTAGTAAAAGCCCAAAATG
GCAAAGTCCCC
Protein sequenceShow/hide protein sequence
MKFLHTALAMAILLLLLQLQPNLAGRTLHEKPPMVRRMELNLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAANHSTQRPSTHRRYAAPARVVQNLV