; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G12500 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G12500
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDNA-directed RNA polymerase V subunit 7-like
Genome locationChr3:9523887..9526210
RNA-Seq ExpressionCSPI03G12500
SyntenyCSPI03G12500
Gene Ontology termsGO:0006352 - DNA-templated transcription, initiation (biological process)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0003727 - single-stranded RNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold
IPR036898 - RNA polymerase Rpb7-like, N-terminal domain superfamily
IPR045113 - RNA polymerase Rpb7-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134101.1 DNA-directed RNA polymerase V subunit 7 [Cucumis sativus]8.7e-10499.47Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRG
        MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEK NKDHGYFLSVTSLRSIGKGIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRG
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRG

Query:  LLLKCGPIKYVFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        LLLKCGPIKYVFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
Subjt:  LLLKCGPIKYVFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

XP_008438585.1 PREDICTED: DNA-directed RNA polymerase V subunit 7-like [Cucumis melo]7.4e-10397.89Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRG
        MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEK NKDHGYFLSVTSL+SIGKG+VKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRG
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRG

Query:  LLLKCGPIKYVFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        LLLKCGPIKY FLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
Subjt:  LLLKCGPIKYVFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

XP_022924760.1 DNA-directed RNA polymerase V subunit 7-like [Cucurbita moschata]1.4e-9088.54Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKN--ESQCVSFPITFICRTFLPFEGEILHGVVRHIFQ
        MF EVELVRDVE+TVEKEKRD  N QRYIITCLLENLLKEK +KDHGYFL+VTSL+SIGKG VKN  ESQCVSFPITF CRTFLP EGEILHGVVRHIF+
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKN--ESQCVSFPITFICRTFLPFEGEILHGVVRHIFQ

Query:  RGLLLKCGPIKYVFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        RGLLLKCGPIKYVFLSARKMPTY YVGGENPVFSS + ATIGNDVVVRFSVLGVRW+EKRGCIKKEFVMLASLEGN SLGPIS SDSDEFDL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

XP_038877102.1 DNA-directed RNA polymerase V subunit 7-like isoform X1 [Benincasa hispida]1.1e-9390.96Show/hide
Query:  YEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLL
        Y VELV+DVEIT EKEKRDA NFQRYIITCLLENLLKEK NKDHGYFL+VTSL+SIGKG+V ++SQCVSFPITF CRTFLPFEGEILHGVV HIF+RGLL
Subjt:  YEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLL

Query:  LKCGPIKYVFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        LKCGPIKYVFLSA KMPTY YVGGENPVFSS EFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
Subjt:  LKCGPIKYVFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

XP_038877103.1 DNA-directed RNA polymerase V subunit 7-like isoform X2 [Benincasa hispida]1.5e-9591.58Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRG
        MFYEVELV+DVEIT EKEKRDA NFQRYIITCLLENLLKEK NKDHGYFL+VTSL+SIGKG+V ++SQCVSFPITF CRTFLPFEGEILHGVV HIF+RG
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRG

Query:  LLLKCGPIKYVFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        LLLKCGPIKYVFLSA KMPTY YVGGENPVFSS EFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
Subjt:  LLLKCGPIKYVFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

TrEMBL top hitse value%identityAlignment
A0A0A0L5A3 Uncharacterized protein4.2e-10499.47Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRG
        MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEK NKDHGYFLSVTSLRSIGKGIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRG
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRG

Query:  LLLKCGPIKYVFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        LLLKCGPIKYVFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
Subjt:  LLLKCGPIKYVFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

A0A1S3AWE2 DNA-directed RNA polymerase V subunit 7-like3.6e-10397.89Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRG
        MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEK NKDHGYFLSVTSL+SIGKG+VKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRG
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRG

Query:  LLLKCGPIKYVFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        LLLKCGPIKY FLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
Subjt:  LLLKCGPIKYVFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

A0A5A7U0C3 DNA-directed RNA polymerase V subunit 7-like3.6e-10397.89Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRG
        MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEK NKDHGYFLSVTSL+SIGKG+VKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRG
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRG

Query:  LLLKCGPIKYVFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        LLLKCGPIKY FLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
Subjt:  LLLKCGPIKYVFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

A0A6J1EFY9 DNA-directed RNA polymerase V subunit 7-like7.0e-9188.54Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKN--ESQCVSFPITFICRTFLPFEGEILHGVVRHIFQ
        MF EVELVRDVE+TVEKEKRD  N QRYIITCLLENLLKEK +KDHGYFL+VTSL+SIGKG VKN  ESQCVSFPITF CRTFLP EGEILHGVVRHIF+
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKN--ESQCVSFPITFICRTFLPFEGEILHGVVRHIFQ

Query:  RGLLLKCGPIKYVFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        RGLLLKCGPIKYVFLSARKMPTY YVGGENPVFSS + ATIGNDVVVRFSVLGVRW+EKRGCIKKEFVMLASLEGN SLGPIS SDSDEFDL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

A0A6J1IQI7 DNA-directed RNA polymerase V subunit 7-like isoform X11.7e-8987.5Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKN--ESQCVSFPITFICRTFLPFEGEILHGVVRHIFQ
        MF EVELVR+VE+TVEKEKRD  N QRYIITCLLENLLKEK +KDHGYFL+VTSL+SIGK  VKN  ESQCVSFPITF CRTFLP EGEILHGVVRHIF+
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKN--ESQCVSFPITFICRTFLPFEGEILHGVVRHIFQ

Query:  RGLLLKCGPIKYVFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        RGLLLKCGPIKYVFLSARKMPTY YVGGENPVFSS + ATIGNDVVVRFSVLGVRW+EKRGCI KEFVMLASLEGN SLGPISLSDSDEFDL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

SwissProt top hitse value%identityAlignment
A6QRA1 DNA-directed RNA polymerase V subunit 72.9e-3340.33Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRG
        MF +V+L  +V I  E         +R I+  LLE    +K  K+ GY+++VT+L  IG+G ++  +  V FP+ F   TF  F+GEI+HGVV  + + G
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRG

Query:  LLLKCGPIKYVFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPIS
        + ++CGPI+ V+LS  KMP Y+Y+ GENP+F +++ + I  +  VR  V+G++W+E    +++EF  LASLEG + LGP+S
Subjt:  LLLKCGPIKYVFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPIS

P38421 DNA-directed RNA polymerase II subunit 71.3e-1225.16Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRG
        MF+ + L R++++     +    N +  +++ L+++ ++   +  HG+ +++T + +IGKG++++ +  V+FP+ + C  F PF+GEIL  VV  + + G
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRG

Query:  LLLKCGPIKYVFLSARKMP-TYQYVGGENPVFSSKEFAT-IGNDVVVRFSVLGVR
           + GP++ +F+S   +P   ++  G+ P +++ + +  I  +  VR  ++G R
Subjt:  LLLKCGPIKYVFLSARKMP-TYQYVGGENPVFSSKEFAT-IGNDVVVRFSVLGVR

P46279 DNA-directed RNA polymerase II subunit RPB72.5e-1327.85Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKE---KTNKDHGYFLSVTSLRSIGKGIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIF
        MF+ + L R++++           F R +   L+  L+K+     +  HG+ ++VT + +IGKG++++ +  V+FP+ + C  F PF+GEIL  VV  + 
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKE---KTNKDHGYFLSVTSLRSIGKGIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIF

Query:  QRGLLLKCGPIKYVFLSARKMP-TYQYVGGENPVFSSKEFAT-IGNDVVVRFSVLGVR
        + G   + GP++ +F+S   +P   ++  G+ P +++ + +  I  D  VR  ++G R
Subjt:  QRGLLLKCGPIKYVFLSARKMP-TYQYVGGENPVFSSKEFAT-IGNDVVVRFSVLGVR

Q6NML5 DNA-directed RNA polymerase subunit 7-like protein5.2e-3539.7Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKN-------ESQCVSFPITFICRTFLPFEGEILHGVV
        MF EVE+ RDV I    +  +  +  + I+  LL++L+ EK  ++HG++L +T+L+SIG     N       +++ ++FP++F CRTFLP  G+IL G V
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKN-------ESQCVSFPITFICRTFLPFEGEILHGVV

Query:  RHIFQRGLLLKCGPIKYVFLSARKMPTYQYVGG-----ENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE
        + +   G  ++ GP++Y +LS  KMP Y YV       E P F   + + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPISL+ SDE
Subjt:  RHIFQRGLLLKCGPIKYVFLSARKMPTYQYVGG-----ENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE

Q8LE42 DNA-directed RNA polymerase IV subunit 73.3e-2940.78Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRG
        MF +V+L  DV I  E +       QR I+  LLE   KEK  KD GY ++ T L +IG+G +K ++  + FP+ F    F  F+GEI+HGVV  + + G
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRG

Query:  LLLKCGPIKYVFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGP
        + LK GP + ++LS  KMP Y+++ GENP F ++  + I     VRF VL   W E     +K+F+ LAS++G+N LGP
Subjt:  LLLKCGPIKYVFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGP

Arabidopsis top hitse value%identityAlignment
AT3G22900.1 RNA polymerase Rpb7-like, N-terminal domain2.3e-3040.78Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRG
        MF +V+L  DV I  E +       QR I+  LLE   KEK  KD GY ++ T L +IG+G +K ++  + FP+ F    F  F+GEI+HGVV  + + G
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRG

Query:  LLLKCGPIKYVFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGP
        + LK GP + ++LS  KMP Y+++ GENP F ++  + I     VRF VL   W E     +K+F+ LAS++G+N LGP
Subjt:  LLLKCGPIKYVFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGP

AT4G14520.1 DNA-directed RNA polymerase II-related3.7e-3639.7Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKN-------ESQCVSFPITFICRTFLPFEGEILHGVV
        MF EVE+ RDV I    +  +  +  + I+  LL++L+ EK  ++HG++L +T+L+SIG     N       +++ ++FP++F CRTFLP  G+IL G V
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKN-------ESQCVSFPITFICRTFLPFEGEILHGVV

Query:  RHIFQRGLLLKCGPIKYVFLSARKMPTYQYVGG-----ENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE
        + +   G  ++ GP++Y +LS  KMP Y YV       E P F   + + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPISL+ SDE
Subjt:  RHIFQRGLLLKCGPIKYVFLSARKMPTYQYVGG-----ENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE

AT4G14520.2 DNA-directed RNA polymerase II-related3.7e-3639.7Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKN-------ESQCVSFPITFICRTFLPFEGEILHGVV
        MF EVE+ RDV I    +  +  +  + I+  LL++L+ EK  ++HG++L +T+L+SIG     N       +++ ++FP++F CRTFLP  G+IL G V
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKN-------ESQCVSFPITFICRTFLPFEGEILHGVV

Query:  RHIFQRGLLLKCGPIKYVFLSARKMPTYQYVGG-----ENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE
        + +   G  ++ GP++Y +LS  KMP Y YV       E P F   + + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPISL+ SDE
Subjt:  RHIFQRGLLLKCGPIKYVFLSARKMPTYQYVGG-----ENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE

AT4G14520.3 DNA-directed RNA polymerase II-related3.7e-3639.7Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKN-------ESQCVSFPITFICRTFLPFEGEILHGVV
        MF EVE+ RDV I    +  +  +  + I+  LL++L+ EK  ++HG++L +T+L+SIG     N       +++ ++FP++F CRTFLP  G+IL G V
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKN-------ESQCVSFPITFICRTFLPFEGEILHGVV

Query:  RHIFQRGLLLKCGPIKYVFLSARKMPTYQYVGG-----ENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE
        + +   G  ++ GP++Y +LS  KMP Y YV       E P F   + + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPISL+ SDE
Subjt:  RHIFQRGLLLKCGPIKYVFLSARKMPTYQYVGG-----ENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE

AT4G14660.1 RNA polymerase Rpb7-like, N-terminal domain2.0e-3440.33Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRG
        MF +V+L  +V I  E         +R I+  LLE    +K  K+ GY+++VT+L  IG+G ++  +  V FP+ F   TF  F+GEI+HGVV  + + G
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRG

Query:  LLLKCGPIKYVFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPIS
        + ++CGPI+ V+LS  KMP Y+Y+ GENP+F +++ + I  +  VR  V+G++W+E    +++EF  LASLEG + LGP+S
Subjt:  LLLKCGPIKYVFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTATGAAGTGGAACTAGTGAGAGATGTGGAAATCACAGTGGAAAAGGAAAAGAGAGATGCTCACAATTTCCAGAGGTACATTATAACATGTTTATTAGAAAACTT
ATTGAAGGAGAAGACCAACAAAGACCATGGCTATTTTCTTTCTGTTACTAGCTTGAGGAGCATAGGCAAGGGAATTGTTAAGAATGAGTCTCAATGTGTTTCATTCCCCA
TTACCTTTATTTGCCGAACCTTTTTGCCTTTTGAGGGGGAGATCTTACATGGAGTTGTTCGTCACATATTTCAGCGTGGATTACTCTTAAAATGTGGACCGATCAAGTAC
GTGTTTCTTTCAGCTCGTAAAATGCCAACCTACCAGTACGTTGGTGGTGAAAATCCGGTATTCTCAAGCAAAGAATTTGCTACGATTGGTAACGATGTCGTTGTACGGTT
CAGTGTGCTTGGTGTGAGATGGATAGAGAAAAGAGGATGTATCAAAAAAGAATTTGTGATGCTTGCTAGCTTAGAAGGTAACAACTCACTTGGACCTATTTCATTGTCGG
ACTCCGATGAGTTTGACCTGTAA
mRNA sequenceShow/hide mRNA sequence
GGATTTATATTTATAGTACACGTCATTGATCATATCGGAGAAAGGCATCGGAGCAGCTTCCTTTTTTCCAAAATCCATATTTTCTTTTTTGTTTTTGTATAAAAATGGCA
AACCCATCTCCCCTTTACCTTTATCCGTTCCTCCAATGCACTAACATCCCCCAACATTTCTTCTTCCTAATGCCCTCCCAATTTCATTTCTCTACTTCTTCCCAATTCTC
CCTCCCTCCCGCCCTTCCCGTTCTTCATTTTTCTTACTCAGGTAACTCATCATTTTCTCCGCCCTTTCCTTCTAATTCCCTTCCCTGTCTATGCTTCTTCCCCTCCCGTT
TTCATTTTCCACACTTTAGGGATGCTTTTCCATTTCAAACTTCGGATCTGTACCCGTTTTCTGGTTCTCTGTAATTATCTAGGAAATGTTTTATGAAGTGGAACTAGTGA
GAGATGTGGAAATCACAGTGGAAAAGGAAAAGAGAGATGCTCACAATTTCCAGAGGTACATTATAACATGTTTATTAGAAAACTTATTGAAGGAGAAGACCAACAAAGAC
CATGGCTATTTTCTTTCTGTTACTAGCTTGAGGAGCATAGGCAAGGGAATTGTTAAGAATGAGTCTCAATGTGTTTCATTCCCCATTACCTTTATTTGCCGAACCTTTTT
GCCTTTTGAGGGGGAGATCTTACATGGAGTTGTTCGTCACATATTTCAGCGTGGATTACTCTTAAAATGTGGACCGATCAAGTACGTGTTTCTTTCAGCTCGTAAAATGC
CAACCTACCAGTACGTTGGTGGTGAAAATCCGGTATTCTCAAGCAAAGAATTTGCTACGATTGGTAACGATGTCGTTGTACGGTTCAGTGTGCTTGGTGTGAGATGGATA
GAGAAAAGAGGATGTATCAAAAAAGAATTTGTGATGCTTGCTAGCTTAGAAGGTAACAACTCACTTGGACCTATTTCATTGTCGGACTCCGATGAGTTTGACCTGTAA
Protein sequenceShow/hide protein sequence
MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKTNKDHGYFLSVTSLRSIGKGIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKY
VFLSARKMPTYQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL