; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G12560 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G12560
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionrRNA-processing protein EFG1
Genome locationChr3:9570992..9574782
RNA-Seq ExpressionCSPI03G12560
SyntenyCSPI03G12560
Gene Ontology termsGO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0030688 - preribosome, small subunit precursor (cellular component)
InterPro domainsIPR019310 - rRNA-processing protein Efg1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134104.1 rRNA-processing protein EFG1 isoform X1 [Cucumis sativus]8.8e-168100Show/hide
Query:  MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSGSFKARGS
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSGSFKARGS
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSGSFKARGS

Query:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
        SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV

XP_011650949.1 rRNA-processing protein EFG1 isoform X2 [Cucumis sativus]4.1e-16599.4Show/hide
Query:  MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSGSFKARGS
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNH  QISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSGSFKARGS
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSGSFKARGS

Query:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
        SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV

XP_016899108.1 PREDICTED: rRNA-processing protein EFG1 [Cucumis melo]1.2e-16197.9Show/hide
Query:  MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVN AARRSKGL VEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQFQDSD+ADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSGSFKARGS
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDEK   RQISARALMPPPRPTKSFSSSAQAWTKAGSS+RKSSTNHRAEFSTSSNTSGGRSGSFKARGS
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSGSFKARGS

Query:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
        SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV

XP_038877104.1 rRNA-processing protein efg1-like isoform X1 [Benincasa hispida]5.9e-15694.93Show/hide
Query:  MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVN  ARRSKGL VEKKPKSVSLKNQIRSAERMLRKNLPAEVR+AQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQ QDSD+ADQLSKLKEDLEYVRFFPKTEKYVALFTG DDSDMVDRR KLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSG-SFKARG
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDE+NHQRQISAR LMPPPRPTKSFSSSAQA +KAGSS+RKSSTNHRAEFSTSSNTSG RSG SFK RG
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSG-SFKARG

Query:  SSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
        SSN SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  SSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV

XP_038877105.1 rRNA-processing protein efg1-like isoform X2 [Benincasa hispida]2.1e-15394.33Show/hide
Query:  MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVN  ARRSKGL VEKKPKSVSLKNQIRSAERMLRKNLPAEVR+AQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQ QDSD+ADQLSKLKEDLEYVRFFPKTEKYVALFTG DDSDMVDRR KLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSG-SFKARG
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDE+NH  QISAR LMPPPRPTKSFSSSAQA +KAGSS+RKSSTNHRAEFSTSSNTSG RSG SFK RG
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSG-SFKARG

Query:  SSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
        SSN SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  SSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV

TrEMBL top hitse value%identityAlignment
A0A0A0L7B4 rRNA-processing protein EFG14.3e-168100Show/hide
Query:  MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSGSFKARGS
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSGSFKARGS
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSGSFKARGS

Query:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
        SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV

A0A1S4DT25 rRNA-processing protein EFG16.0e-16297.9Show/hide
Query:  MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVN AARRSKGL VEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQFQDSD+ADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSGSFKARGS
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDEK   RQISARALMPPPRPTKSFSSSAQAWTKAGSS+RKSSTNHRAEFSTSSNTSGGRSGSFKARGS
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSGSFKARGS

Query:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
        SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV

A0A5A7U718 rRNA-processing protein EFG12.6e-14997.72Show/hide
Query:  MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVN AARRSKGL VEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQFQDSD+ADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSGSFKARGS
        SDEADADDEWTDKSTREQA STSGKAASGMSSDEKNH  QISARALMPPPRPTKSFSSSAQAWTKAGSS+RKSSTNHRAEFSTSSNTSGGRSGSFKARGS
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSGSFKARGS

Query:  SNSSHTG
        SNSSHTG
Subjt:  SNSSHTG

A0A6J1D0D0 rRNA-processing protein EFG13.9e-14591.02Show/hide
Query:  MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVN AARRSK L V+KKPKSVSLKNQIRSAERMLRK LPA+VR+AQEKKLEGLRKQQEI SRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQ QDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTG DDSDMVDRR KLR+QIK NLIAAAASGKDLEETGSEDDGLLD+SEDDFFL GSS
Subjt:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSG-SFKARG
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDE+N QRQISARALMPPPRPTKSF SSAQA  K GSS+RK ST+ RAE STSSNTS GRSG SFK RG
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSG-SFKARG

Query:  SSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
        SSNSSHTGQSSNISSNSDAHKPRRKRRPKKKK Q
Subjt:  SSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ

A0A6J1G415 rRNA-processing protein EFG11.7e-14591.04Show/hide
Query:  MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVN AARRSK L VEKKPKSVSLKNQIRSAERMLRKNLPAEVR+ QEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQ QDSDIADQLSKLKEDLEYVRFFPKTEKY+ALFTGSDDSD VDRR KLR+QIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFF+ GSS
Subjt:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQR-QISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSG-SFKAR
        SDEADADDEWTDKS RE ASSTSGKAASGMSSDE+NHQR QISARALMPPPRPTKSF SSAQA +K GSS+RK STN RAE S+SSNTS  RSG SFKAR
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQR-QISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSG-SFKAR

Query:  GSSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
        GSSN SHTG SSNISSNSDAHKPRRKRRPKKKKQQ
Subjt:  GSSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ

SwissProt top hitse value%identityAlignment
A3LNR4 rRNA-processing protein EFG15.3e-0630.46Show/hide
Query:  GKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKN-LPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQR
        GKRR N A+    G+      +   LK +IR  ER+L+K+ LPA+VR   E+ ++ L+ + +        +++  +   ++FFE++K  R++++  K   
Subjt:  GKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKN-LPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQR

Query:  APSGQFQDSDIADQLSKLKE---DLEYVRFFPKTEKYVALFTGSDDSDMVD
          S      DI     ++K    DL YV  FPK+EKY++L+    ++D VD
Subjt:  APSGQFQDSDIADQLSKLKE---DLEYVRFFPKTEKYVALFTGSDDSDMVD

A8N5J5 rRNA-processing protein EFG18.1e-0730.51Show/hide
Query:  PKSVSLKNQIRSAERMLRK-NLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSDIADQLSKLKE
        P    +K+ +R   R+L K NL A+ R   E++L+ L  + +   +   ER + +R  K+KFFER+K+ R++ ++++   +  G  +   +  QL + + 
Subjt:  PKSVSLKNQIRSAERMLRK-NLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSDIADQLSKLKE

Query:  DLEYVRFFPKTEKYVALF
        +L Y+  +PKT+KY++LF
Subjt:  DLEYVRFFPKTEKYVALF

P0CN34 rRNA-processing protein EFG15.3e-0632.62Show/hide
Query:  PKSVSLKNQIRSAERMLRK-NLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLE-KLQRAPSGQFQDSDIADQLSKLK
        P    LK+ IR  +R+L K NL   +R + +++L  L        R  VERK   +  K+KFFER+K+ R I+R + KL  + +   + S   ++L   +
Subjt:  PKSVSLKNQIRSAERMLRK-NLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLE-KLQRAPSGQFQDSDIADQLSKLK

Query:  EDLEYVRFFPKTEKYVALF------TGSDDSDMVDRRKKLR
          L YV  +P T+KY++LF      T  +D D    + KL+
Subjt:  EDLEYVRFFPKTEKYVALF------TGSDDSDMVDRRKKLR

P0CN35 rRNA-processing protein EFG15.3e-0632.62Show/hide
Query:  PKSVSLKNQIRSAERMLRK-NLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLE-KLQRAPSGQFQDSDIADQLSKLK
        P    LK+ IR  +R+L K NL   +R + +++L  L        R  VERK   +  K+KFFER+K+ R I+R + KL  + +   + S   ++L   +
Subjt:  PKSVSLKNQIRSAERMLRK-NLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLE-KLQRAPSGQFQDSDIADQLSKLK

Query:  EDLEYVRFFPKTEKYVALF------TGSDDSDMVDRRKKLR
          L YV  +P T+KY++LF      T  +D D    + KL+
Subjt:  EDLEYVRFFPKTEKYVALF------TGSDDSDMVDRRKKLR

Q09867 rRNA-processing protein efg14.6e-1035.29Show/hide
Query:  KKPKSVSLKNQIRSAERMLRK-NLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEK-LQRAPSGQFQDSDIADQLSK
        K P    LK +IR  ER+L+K NLPA +R   E+ L GL++Q  +      ++KIF R +K++FFER+K ERRI++LEK L+       +       + K
Subjt:  KKPKSVSLKNQIRSAERMLRK-NLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEK-LQRAPSGQFQDSDIADQLSK

Query:  LKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKL
         + DL Y++ +P   KYV+L+         + R ++
Subjt:  LKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKL

Arabidopsis top hitse value%identityAlignment
AT1G04230.1 Protein of unknown function (DUF2361)1.4e-9965.59Show/hide
Query:  MAHGGYGKRRVNL------AARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIE
        MAHGGY +RRV         +RRSKGL VEKKPK+ SLKNQIRS  RM+RK+LP EVR+A EKKL+ L+KQQ+IH RLA ERKIFLR+RK++FFERRKIE
Subjt:  MAHGGYGKRRVNL------AARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIE

Query:  RRIRRLEKLQRAPSGQF-QDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDD
        R IRRLEKL R+ SG + QD++I  QL++LKEDLEYVRFFPK EKYV+LF+GSDD  + +RR KLR+QIKAN+I AAASGK+LEETGSEDD LLD+S+DD
Subjt:  RRIRRLEKLQRAPSGQF-QDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDD

Query:  FFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSG
        FF+ GSSSDEADADDEWTDKST+E  SS SG+A S MSSDE+N Q+  S R LMPPPR            ++  S+ R+ S+  R E  +SSNTS  RS 
Subjt:  FFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSG

Query:  SFKARGSSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
        S  A   + SSHT QSSN+SSNSDAHKP+RKRRPKKKK Q
Subjt:  SFKARGSSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ

AT5G43720.1 Protein of unknown function (DUF2361)2.4e-9965.5Show/hide
Query:  MAHGGYGKRRVNL------AARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIE
        MAHGGY KRR +       ++RRSK L VEKKPK+VS+KNQ+RS ER LRK+LP EVR++  +KLE L+KQQ+ H+RLAVERKIF R+RKIKFFERRKIE
Subjt:  MAHGGYGKRRVNL------AARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIE

Query:  RRIRRLEKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDF
        R IRRLEKLQR  S    D DIA+QLSKLKEDLEYVRFFPK EKYV+LFTG++DS+++++R K+R+QIKAN+I AAASGK+LEETGSEDDGLLD+S+DDF
Subjt:  RRIRRLEKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDF

Query:  FLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSS--NTSGGRS
        F  GSSSDEADADDE TDKS +E ASS SG+A SGMSSDE+N Q+Q S RALMPPP+             +  S+ RK+    R E  +SS  NTS  RS
Subjt:  FLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSS--NTSGGRS

Query:  -GSFKARGSSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
          S+ AR S+ +S++ QSSN+SSNSDAHKP+RKRRPKKKKQQ
Subjt:  -GSFKARGSSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCATGGTGGCTACGGCAAGCGCAGGGTCAACCTGGCTGCCCGCCGATCGAAGGGTTTGACCGTTGAAAAGAAGCCCAAGTCCGTCTCCCTCAAGAACCAAATTCG
ATCTGCCGAGCGCATGCTTCGCAAGAATTTACCTGCTGAAGTGAGGGACGCTCAAGAAAAGAAGTTGGAAGGACTTAGAAAACAGCAAGAAATTCATTCTCGGCTGGCAG
TTGAGCGCAAAATATTCTTGCGTGACAGGAAGATAAAATTTTTTGAGAGGAGAAAAATTGAAAGAAGAATTAGGCGACTTGAGAAACTTCAGCGTGCTCCATCTGGCCAG
TTTCAAGATTCAGATATTGCAGATCAACTGTCTAAGTTGAAAGAGGATCTTGAATATGTCAGGTTCTTTCCCAAAACAGAAAAATATGTAGCTTTATTTACCGGAAGTGA
TGATTCAGACATGGTTGATAGGAGAAAGAAGTTACGCGAGCAGATTAAAGCCAATTTGATTGCTGCGGCAGCTAGTGGAAAGGATTTAGAAGAGACCGGTAGTGAGGATG
ATGGGTTGCTTGACATGAGCGAGGATGATTTCTTCTTATGTGGCAGCTCAAGTGATGAAGCAGATGCAGATGATGAGTGGACAGATAAAAGCACAAGGGAACAAGCTTCC
AGTACTTCCGGCAAAGCAGCATCCGGCATGTCTAGTGATGAAAAAAATCATCAGAGGCAGATTTCTGCCAGAGCCTTGATGCCTCCTCCTCGTCCAACCAAATCATTTTC
AAGTTCAGCTCAAGCTTGGACAAAAGCTGGATCTTCGGTGAGAAAATCTTCAACAAATCACAGGGCTGAGTTTTCTACATCCAGCAATACATCAGGTGGTAGAAGTGGAT
CTTTTAAAGCTAGGGGATCTTCAAACTCCTCGCATACAGGTCAGAGCAGTAATATAAGTTCCAATTCTGATGCTCACAAACCCAGAAGAAAGAGGAGGCCAAAAAAGAAA
AAACAACAGGTATGA
mRNA sequenceShow/hide mRNA sequence
GCGCTAAATAAATAGGGATTTGCATTAATTAAGAGGATCGTCCGGAAAGAAAATCCAAAAAGTTAAAAAAAGAAAAAGGAAGGAAAGAAAATAATGTTGTGAGAGTGAAA
CAAAGAGAGAGAGAGAGAGAGAGAGATATCCCTCTCCGCCTCCGGTGCTATGAACACACCGGTGTGGTGCTGAGACTCTCTTCTCAAAACCCTTGCCCTCCAAACCACGT
TCTAGGGCACAATCTGACAATCACTATTCCCCTTCCGCCCCTCCTCTTCTCCCTTATCTCCTTCTTCCCCAACCATGGCCCATGGTGGCTACGGCAAGCGCAGGGTCAAC
CTGGCTGCCCGCCGATCGAAGGGTTTGACCGTTGAAAAGAAGCCCAAGTCCGTCTCCCTCAAGAACCAAATTCGATCTGCCGAGCGCATGCTTCGCAAGAATTTACCTGC
TGAAGTGAGGGACGCTCAAGAAAAGAAGTTGGAAGGACTTAGAAAACAGCAAGAAATTCATTCTCGGCTGGCAGTTGAGCGCAAAATATTCTTGCGTGACAGGAAGATAA
AATTTTTTGAGAGGAGAAAAATTGAAAGAAGAATTAGGCGACTTGAGAAACTTCAGCGTGCTCCATCTGGCCAGTTTCAAGATTCAGATATTGCAGATCAACTGTCTAAG
TTGAAAGAGGATCTTGAATATGTCAGGTTCTTTCCCAAAACAGAAAAATATGTAGCTTTATTTACCGGAAGTGATGATTCAGACATGGTTGATAGGAGAAAGAAGTTACG
CGAGCAGATTAAAGCCAATTTGATTGCTGCGGCAGCTAGTGGAAAGGATTTAGAAGAGACCGGTAGTGAGGATGATGGGTTGCTTGACATGAGCGAGGATGATTTCTTCT
TATGTGGCAGCTCAAGTGATGAAGCAGATGCAGATGATGAGTGGACAGATAAAAGCACAAGGGAACAAGCTTCCAGTACTTCCGGCAAAGCAGCATCCGGCATGTCTAGT
GATGAAAAAAATCATCAGAGGCAGATTTCTGCCAGAGCCTTGATGCCTCCTCCTCGTCCAACCAAATCATTTTCAAGTTCAGCTCAAGCTTGGACAAAAGCTGGATCTTC
GGTGAGAAAATCTTCAACAAATCACAGGGCTGAGTTTTCTACATCCAGCAATACATCAGGTGGTAGAAGTGGATCTTTTAAAGCTAGGGGATCTTCAAACTCCTCGCATA
CAGGTCAGAGCAGTAATATAAGTTCCAATTCTGATGCTCACAAACCCAGAAGAAAGAGGAGGCCAAAAAAGAAAAAACAACAGGTATGATAGATTGGCCTCGGCGAGCTG
TAACATTACAAGCCTAAACCTGACTTCTGAAGTGGATTCTGAATCTTAACCCTTCCATGAAAGTATCTTATCGGCTCTCGACCCTTTTGGCAGTTTGCTGCGTATATCAA
GGGTTTGAGAAAAATTATTTCCTTTAGTTGTGTAATGATCTATGATCTTTTATTGTGGCTCTTTTTTCCTTTCTTGCTTTCTTCCCTTTTGGATCATCAGAAAAATCTTC
ACAGGTTGTGGTTTTGGGTTGTTTTCTTTTCTATACGGTTGAAACTTGTATTGAAACCTGAATCTTATATACCATGCTTCCTCTGTGGCCTTTCTCAAAATTACTCCCAC
TACTTCTTTGGAGTTCACCCTATTTTACCTACTATATATTGATATCAC
Protein sequenceShow/hide protein sequence
MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQ
FQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQAS
STSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSGSFKARGSSNSSHTGQSSNISSNSDAHKPRRKRRPKKK
KQQV