; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G12660 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G12660
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionvegetative cell wall protein gp1
Genome locationChr3:9645880..9646773
RNA-Seq ExpressionCSPI03G12660
SyntenyCSPI03G12660
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597407.1 hypothetical protein SDJN03_10587, partial [Cucurbita argyrosperma subsp. sororia]6.6e-4366.3Show/hide
Query:  MSYASLFSFTLIRKTLPSYY--PSSSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPE
        MS  S FSFTLIRKTLP YY   SSSN  I  FL SH +FLPF    A LS  LL GDSPEFP+  P+P PS PLEIPQ S  PEIDP TP ELP +TP 
Subjt:  MSYASLFSFTLIRKTLPSYY--PSSSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPE

Query:  PEFP----PMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPP
        P+FP    P+PPGP+ P PP+PSPPGIDVP+PP KPP+IEPP PGSPVPEP+ILPP PPE  PPRPP      GPEILTS S P
Subjt:  PEFP----PMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPP

KGN56930.1 hypothetical protein Csa_011403 [Cucumis sativus]4.5e-9297.89Show/hide
Query:  MAVRMSYASLFSFTLIRKTLPSYYPSSSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSIT
        MAVRMSY SLFSFTLIRKTLPSYYP SSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFP+IRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSIT
Subjt:  MAVRMSYASLFSFTLIRKTLPSYYPSSSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSIT

Query:  PEPEFPPMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPPGFVALTYI
        PEPEFPP PPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPPGFVALTYI
Subjt:  PEPEFPPMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPPGFVALTYI

TYK17238.1 hypothetical protein E5676_scaffold434G00890 [Cucumis melo var. makuwa]1.5e-7484.82Show/hide
Query:  MAVRMSYASLFSFTLIRKTLPSYYPSSSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSIT
        MAVRMS  SLFSFTLI KTLPSYYPSSSNF + P LFSHSQFL FNEY  SLS S+LSGDSPEFPK RPVPPPS PLEIPQFSPPPEIDPSTPSELPSIT
Subjt:  MAVRMSYASLFSFTLIRKTLPSYYPSSSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSIT

Query:  PEPEFP-PMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPPGFVALTYI
        PEP+FP P PPGPEFPKPP PSPPGIDVP+PPR+PP+IEPPWPGSPVP PEILPPSPPEE+PPRPP PPRPFGPEILTS SP  FV  TYI
Subjt:  PEPEFP-PMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPPGFVALTYI

XP_022949559.1 vegetative cell wall protein gp1 [Cucurbita moschata]3.3e-4265.03Show/hide
Query:  MSYASLFSFTLIRKTLPSYYPSSSNF-AINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPEP
        MS  S FSFTLIRKTLP YY SSS+   + P   SH +FLPF    A LS  LL GDSPEFP+  P+P PS PLEIPQ S  PEIDP TP ELP +TP P
Subjt:  MSYASLFSFTLIRKTLPSYYPSSSNF-AINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPEP

Query:  EFP----PMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPP
        +FP    P+PPGP+ P PP+PSPPGIDVP+PP KPP+IEPP PGSPVPEP+ILPP PPE  PPRPP      GPEILTS S P
Subjt:  EFP----PMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPP

XP_022975412.1 leucine-rich repeat extensin-like protein 3 [Cucurbita maxima]2.3e-4366.85Show/hide
Query:  MSYASLFSFTLIRKTLPSYY--PSSSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPE
        MS  S FSFTLIRKTLP YY   SSSN  I  FL SH +FLPF    A LS  LL GDSPEFP+  P+P PS PLEIPQ S  PEIDP TP ELP ITP 
Subjt:  MSYASLFSFTLIRKTLPSYY--PSSSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPE

Query:  PEFP----PMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPP
        P+FP    P+PPGP+FP PP+PSPPGIDVP+PP KPP+IEPP PGSPVPEP+ILPP PPE  PPRPP      GPEI TS S P
Subjt:  PEFP----PMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPP

TrEMBL top hitse value%identityAlignment
A0A0A0L4M0 Uncharacterized protein2.2e-9297.89Show/hide
Query:  MAVRMSYASLFSFTLIRKTLPSYYPSSSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSIT
        MAVRMSY SLFSFTLIRKTLPSYYP SSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFP+IRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSIT
Subjt:  MAVRMSYASLFSFTLIRKTLPSYYPSSSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSIT

Query:  PEPEFPPMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPPGFVALTYI
        PEPEFPP PPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPPGFVALTYI
Subjt:  PEPEFPPMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPPGFVALTYI

A0A2P6QPT4 Uncharacterized protein7.4e-0838.66Show/hide
Query:  MSYASLFSFTLIRKTLP--SYYPSSSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRP---VPP------PSFPLEIPQFSPPPEID--PS
        MS  S  SFTLI++T+P  S   +S++ +  P L S    + F   P  L  + LSG   E+P   P    PP      PS P E+P  S  PE+D   +
Subjt:  MSYASLFSFTLIRKTLP--SYYPSSSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRP---VPP------PSFPLEIPQFSPPPEID--PS

Query:  TPSELPSITPEPEFPPMPPGPEFPKPPLPSPPGIDVPLPPRKP---PEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPP
        TP   P ++P P  PP+ PGP          PG D P+PP KP   P++  P+P +P+P P+ LPP PP+ VPP PP      GPEI+   +PP
Subjt:  TPSELPSITPEPEFPPMPPGPEFPKPPLPSPPGIDVPLPPRKP---PEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPP

A0A5D3D162 Uncharacterized protein7.0e-7584.82Show/hide
Query:  MAVRMSYASLFSFTLIRKTLPSYYPSSSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSIT
        MAVRMS  SLFSFTLI KTLPSYYPSSSNF + P LFSHSQFL FNEY  SLS S+LSGDSPEFPK RPVPPPS PLEIPQFSPPPEIDPSTPSELPSIT
Subjt:  MAVRMSYASLFSFTLIRKTLPSYYPSSSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSIT

Query:  PEPEFP-PMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPPGFVALTYI
        PEP+FP P PPGPEFPKPP PSPPGIDVP+PPR+PP+IEPPWPGSPVP PEILPPSPPEE+PPRPP PPRPFGPEILTS SP  FV  TYI
Subjt:  PEPEFP-PMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPPGFVALTYI

A0A6J1GD64 vegetative cell wall protein gp11.6e-4265.03Show/hide
Query:  MSYASLFSFTLIRKTLPSYYPSSSNF-AINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPEP
        MS  S FSFTLIRKTLP YY SSS+   + P   SH +FLPF    A LS  LL GDSPEFP+  P+P PS PLEIPQ S  PEIDP TP ELP +TP P
Subjt:  MSYASLFSFTLIRKTLPSYYPSSSNF-AINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPEP

Query:  EFP----PMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPP
        +FP    P+PPGP+ P PP+PSPPGIDVP+PP KPP+IEPP PGSPVPEP+ILPP PPE  PPRPP      GPEILTS S P
Subjt:  EFP----PMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPP

A0A6J1IL49 leucine-rich repeat extensin-like protein 31.1e-4366.85Show/hide
Query:  MSYASLFSFTLIRKTLPSYY--PSSSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPE
        MS  S FSFTLIRKTLP YY   SSSN  I  FL SH +FLPF    A LS  LL GDSPEFP+  P+P PS PLEIPQ S  PEIDP TP ELP ITP 
Subjt:  MSYASLFSFTLIRKTLPSYY--PSSSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPE

Query:  PEFP----PMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPP
        P+FP    P+PPGP+FP PP+PSPPGIDVP+PP KPP+IEPP PGSPVPEP+ILPP PPE  PPRPP      GPEI TS S P
Subjt:  PEFP----PMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G13340.1 Leucine-rich repeat (LRR) family protein3.8e-0442.06Show/hide
Query:  SPEFPKIRPVPPPSFPL---EIPQFSPPPEI-DPSTPSELPSITPEPEFPPMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSP
        SP  P + P+PPPS P      P FS PP +  P  PS  P +   P  PP PP    P PP P PP   V  PP  PP   PP P    P P   PP P
Subjt:  SPEFPKIRPVPPPSFPL---EIPQFSPPPEI-DPSTPSELPSITPEPEFPPMPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSP

Query:  PEEVPPRPPSPPRPFGPEILTSASPP
        P   PP PP PP P  P + +   PP
Subjt:  PEEVPPRPPSPPRPFGPEILTSASPP

AT5G43770.1 proline-rich family protein3.4e-0545.24Show/hide
Query:  GDSP---EFPKIRPVPPPSFPLEIPQFSPPPEIDPS-TPSELPSI--TPEPEFPPMPPGPEFPKPPLPSPPGIDVPLP--PRKPPEIEPPWPGSPVPEPE
        G SP   E P      P   PLE+P+    PEI PS TP E+ ++   P P  PP  PGPEFP PP PSPP  D P P  P+ PP++ PP    P P P+
Subjt:  GDSP---EFPKIRPVPPPSFPLEIPQFSPPPEIDPS-TPSELPSI--TPEPEFPPMPPGPEFPKPPLPSPPGIDVPLP--PRKPPEIEPPWPGSPVPEPE

Query:  ILPPSPPEEVPPRPPSPPRPFGPEIL
        I PP    E PP    PP P GP I+
Subjt:  ILPPSPPEEVPPRPPSPPRPFGPEIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGTAAGAATGTCCTATGCTTCCCTCTTCTCTTTCACTCTCATCAGAAAAACGCTTCCTAGTTATTACCCTTCTTCTTCCAATTTCGCGATCAACCCTTTCCTCTT
TTCTCATTCCCAATTCCTCCCCTTCAATGAGTACCCCGCGTCTCTCTCGCTTTCTCTGCTTTCGGGTGACTCGCCGGAGTTTCCCAAAATCCGCCCCGTTCCACCGCCTT
CTTTTCCCCTCGAAATTCCACAATTTTCGCCTCCTCCGGAGATTGACCCGAGCACTCCGTCGGAGCTTCCATCGATAACTCCGGAACCGGAATTTCCTCCCATGCCACCA
GGACCAGAGTTTCCGAAGCCTCCGTTGCCGTCTCCTCCGGGAATCGATGTACCGCTACCACCCCGTAAGCCTCCAGAAATAGAGCCACCGTGGCCTGGTTCGCCAGTACC
AGAACCAGAGATTTTGCCGCCGTCACCACCGGAGGAGGTGCCACCTAGACCTCCTAGTCCACCTAGACCTTTTGGTCCAGAGATATTGACGTCGGCGTCTCCACCTGGTT
TTGTTGCTCTGACGTACATTTAA
mRNA sequenceShow/hide mRNA sequence
TTTGGCGATCTTTTATATTTTTAAAAATTTGTTTTTGATGTAATTGTTTTCTTTCTTTTGATAGTGGAGAAGTGGGAACAAAAAAATTAATTGCAGTGAAGTGTAGACTA
CGTCTATTTAAGGAAAGTTGGAGGCCATGTTAATACTACACGTGTGAGCGTAAAGGAAAGCAACGTGGGATTAGGGAATTTTAGAAATGTACACGTGGAAATATTAGCAA
TCCATGTGTGAAACAACGTGTCATGTACATTCTCATTTCCCCTTCTTCCTCTGTTCCGTTTTGAGAGCTAAAACGTTTTAATTTCCACAGGAAGAACTGCCATGGCCGTA
AGAATGTCCTATGCTTCCCTCTTCTCTTTCACTCTCATCAGAAAAACGCTTCCTAGTTATTACCCTTCTTCTTCCAATTTCGCGATCAACCCTTTCCTCTTTTCTCATTC
CCAATTCCTCCCCTTCAATGAGTACCCCGCGTCTCTCTCGCTTTCTCTGCTTTCGGGTGACTCGCCGGAGTTTCCCAAAATCCGCCCCGTTCCACCGCCTTCTTTTCCCC
TCGAAATTCCACAATTTTCGCCTCCTCCGGAGATTGACCCGAGCACTCCGTCGGAGCTTCCATCGATAACTCCGGAACCGGAATTTCCTCCCATGCCACCAGGACCAGAG
TTTCCGAAGCCTCCGTTGCCGTCTCCTCCGGGAATCGATGTACCGCTACCACCCCGTAAGCCTCCAGAAATAGAGCCACCGTGGCCTGGTTCGCCAGTACCAGAACCAGA
GATTTTGCCGCCGTCACCACCGGAGGAGGTGCCACCTAGACCTCCTAGTCCACCTAGACCTTTTGGTCCAGAGATATTGACGTCGGCGTCTCCACCTGGTTTTGTTGCTC
TGACGTACATTTAA
Protein sequenceShow/hide protein sequence
MAVRMSYASLFSFTLIRKTLPSYYPSSSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDSPEFPKIRPVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPEPEFPPMPP
GPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPPSPPRPFGPEILTSASPPGFVALTYI