; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G13050 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G13050
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationChr3:9918678..9919575
RNA-Seq ExpressionCSPI03G13050
SyntenyCSPI03G13050
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7028900.1 Pentatricopeptide repeat-containing protein [Cucurbita argyrosperma subsp. argyrosperma]5.3e-7555.97Show/hide
Query:  MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM-----------------SPC-------FRS----------
        MDP L+SALI MYASCG+ DLAWDLYEKISPK MV+ TAMVSGLAKGG+IGDAR VFDQM                 S C       F+           
Subjt:  MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM-----------------SPC-------FRS----------

Query:  -TTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINALEC-------------MEI------
         T  +VIS CAHLGALDQAKWIQ YVDKNGFGKALS+NNALIDMY KCGS EG RE+FGK PKKN ISWT MINAL               M++      
Subjt:  -TTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINALEC-------------MEI------

Query:  ------------HGGLVEEGRRIFHSLTND------------------------EALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK
                    HGGLVEEG+RIFHS+ N+                        EALE++EAMPFAPNAIIWGSLMAAC +HG+TELGEFAAK
Subjt:  ------------HGGLVEEGRRIFHSLTND------------------------EALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK

XP_022959359.1 pentatricopeptide repeat-containing protein At4g14820 [Cucurbita moschata]5.3e-7555.97Show/hide
Query:  MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM-----------------SPC-------FRS----------
        MDP L+SALI MYASCG+ DLAWDLYEKISPK MV+ TAMVSGLAKGG+IGDAR VFDQM                 S C       F+           
Subjt:  MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM-----------------SPC-------FRS----------

Query:  -TTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINALEC-------------MEI------
         T  +VIS CAHLGALDQAKWIQ YVDKNGFGKALS+NNALIDMY KCGS EG RE+FGK PKKN ISWT MINAL               M++      
Subjt:  -TTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINALEC-------------MEI------

Query:  ------------HGGLVEEGRRIFHSLTND------------------------EALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK
                    HGGLVEEG+RIFHS+ N+                        EALE++EAMPFAPNAIIWGSLMAAC +HG+TELGEFAAK
Subjt:  ------------HGGLVEEGRRIFHSLTND------------------------EALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK

XP_023538947.1 pentatricopeptide repeat-containing protein At4g14820 [Cucurbita pepo subsp. pepo]1.5e-7455.63Show/hide
Query:  MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM-----------------SPC-------FRS----------
        MDP L+SALI MYASCG+ DLAWDLYEKI+PK MV+ TAMVSGLAKGG+IGDAR VFDQM                 S C       F+           
Subjt:  MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM-----------------SPC-------FRS----------

Query:  -TTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINALEC-------------MEI------
         T  +VIS CAHLGALDQAKWIQ YVDKNGFGKALS+NNALIDMY KCGS EG RE+FGK PKKN ISWT MINAL               M++      
Subjt:  -TTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINALEC-------------MEI------

Query:  ------------HGGLVEEGRRIFHSLTND------------------------EALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK
                    HGGLVEEG+RIFHS+ N+                        EALE++EAMPFAPNAIIWGSLMAAC +HG+TELGEFAAK
Subjt:  ------------HGGLVEEGRRIFHSLTND------------------------EALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK

XP_031738996.1 LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g14820, partial [Cucumis sativus]3.2e-9666.44Show/hide
Query:  MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM---------------------------------------S
        MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM                                       S
Subjt:  MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM---------------------------------------S

Query:  PCFRSTTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINAL------------------EC
        PCFRSTTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINAL                  E 
Subjt:  PCFRSTTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINAL------------------EC

Query:  ME-------------IHGGLVEEGRRIFHSLTND-------------------------EALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK
        +E              HGGL EEGRRIFHSLTN+                         EALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK
Subjt:  ME-------------IHGGLVEEGRRIFHSLTND-------------------------EALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK

XP_038902272.1 pentatricopeptide repeat-containing protein At4g14820 [Benincasa hispida]7.4e-7758.36Show/hide
Query:  MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM-----------------SPC-------FRS----------
        MDP L+SALITMYASCG+MDLAWDL+EKI PK MVV TAMVSGLAKGG+IGDAR VFDQM                 S C       F+           
Subjt:  MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM-----------------SPC-------FRS----------

Query:  -TTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINALEC-------------MEI------
         T  +VIS CAHLGALDQA WIQNYVDKNGF KALSVNNALIDMY KCGS EG REVFGK PKKN ISWT MINAL               M++      
Subjt:  -TTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINALEC-------------MEI------

Query:  ------------HGGLVEEGRRIFHSLTND------------------------EALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK
                    HGGLVEEGRRIFHS+TN+                        EALE+IEAMPFAPNAIIWGSLMAAC VHGETELGEFAAK
Subjt:  ------------HGGLVEEGRRIFHSLTND------------------------EALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK

TrEMBL top hitse value%identityAlignment
A0A0A0L5H9 Uncharacterized protein1.1e-11599.51Show/hide
Query:  MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQMSPCFRSTTRNVISDCAHLGALDQAKWIQNYVDKNGFGKAL
        MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQMSPCFRSTTRNVISDCAHLGALDQAKWIQNYVDKNGFGKAL
Subjt:  MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQMSPCFRSTTRNVISDCAHLGALDQAKWIQNYVDKNGFGKAL

Query:  SVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINALECMEIHGGLVEEGRRIFHSLTNDEALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEF
        SVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINALECMEIHGGL EEGRRIFHSLTNDEALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEF
Subjt:  SVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINALECMEIHGGLVEEGRRIFHSLTNDEALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEF

Query:  AAK
        AAK
Subjt:  AAK

A0A6J1C8N9 pentatricopeptide repeat-containing protein At4g148209.2e-7356.66Show/hide
Query:  MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM-----------------SPC-------FRS----------
        MDP L+SALITMYASCG+MDLAWDLYEKISPK MVV TAMVSGL+K G+IGDAR VFDQM                 S C       F+           
Subjt:  MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM-----------------SPC-------FRS----------

Query:  -TTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINAL------------------ECME--
         T  +VIS CAHLGAL+QA WI  YVDKNGF KALSVNNALIDMY KCGS EG REVF K PKKN ISWT MINA                   E +E  
Subjt:  -TTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINAL------------------ECME--

Query:  -----------IHGGLVEEGRRIFHSLTND------------------------EALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK
                    HGGLVEEGR+IFHS+ ND                        EALEMIEAMPFAPNAIIWGSLMAAC V+GETELGEFAAK
Subjt:  -----------IHGGLVEEGRRIFHSLTND------------------------EALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK

A0A6J1H7U5 pentatricopeptide repeat-containing protein At4g148202.6e-7555.97Show/hide
Query:  MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM-----------------SPC-------FRS----------
        MDP L+SALI MYASCG+ DLAWDLYEKISPK MV+ TAMVSGLAKGG+IGDAR VFDQM                 S C       F+           
Subjt:  MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM-----------------SPC-------FRS----------

Query:  -TTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINALEC-------------MEI------
         T  +VIS CAHLGALDQAKWIQ YVDKNGFGKALS+NNALIDMY KCGS EG RE+FGK PKKN ISWT MINAL               M++      
Subjt:  -TTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINALEC-------------MEI------

Query:  ------------HGGLVEEGRRIFHSLTND------------------------EALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK
                    HGGLVEEG+RIFHS+ N+                        EALE++EAMPFAPNAIIWGSLMAAC +HG+TELGEFAAK
Subjt:  ------------HGGLVEEGRRIFHSLTND------------------------EALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK

A0A6J1ICZ7 pentatricopeptide repeat-containing protein At4g14820-like isoform X27.0e-7354.95Show/hide
Query:  MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM-----------------SPC-------FRS----------
        MDP L+SALI MYAS G+ DLAWDLYEKISPK MV+ TAMVSGLAKGG+IGDAR VFDQM                 S C       F+           
Subjt:  MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM-----------------SPC-------FRS----------

Query:  -TTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINALEC-------------MEI------
         T  +VIS CAHLGALDQAKWIQ YVDKNGFGKALS+NNALIDMY KCGS EG RE+FGK PKKN ISWT MINAL               M++      
Subjt:  -TTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINALEC-------------MEI------

Query:  ------------HGGLVEEGRRIFHSLTND------------------------EALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK
                    HGGLV+EG+RIFHS+ N+                        EALE++EAMPFAPNAIIWGSLMAAC +H +TELGEFAAK
Subjt:  ------------HGGLVEEGRRIFHSLTND------------------------EALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK

A0A6J1IE29 pentatricopeptide repeat-containing protein At4g14820-like7.0e-7354.95Show/hide
Query:  MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM-----------------SPC-------FRS----------
        MDP L+SALI MYAS G+ DLAWDLYEKISPK MV+ TAMVSGLAKGG+IGDAR VFDQM                 S C       F+           
Subjt:  MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM-----------------SPC-------FRS----------

Query:  -TTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINALEC-------------MEI------
         T  +VIS CAHLGALDQAKWIQ YVDKNGFGKALS+NNALIDMY KCGS EG RE+FGK PKKN ISWT MINAL               M++      
Subjt:  -TTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINALEC-------------MEI------

Query:  ------------HGGLVEEGRRIFHSLTND------------------------EALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK
                    HGGLV+EG+RIFHS+ N+                        EALE++EAMPFAPNAIIWGSLMAAC +H +TELGEFAAK
Subjt:  ------------HGGLVEEGRRIFHSLTND------------------------EALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK

SwissProt top hitse value%identityAlignment
O23337 Pentatricopeptide repeat-containing protein At4g148206.4e-4737.54Show/hide
Query:  MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQMSP----CFRS------------------------------
        MD  L +AL+TMYA  G MD+A + + K+S + + V TAMVSG +K G++ DA+ +FDQ       C+ +                              
Subjt:  MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQMSP----CFRS------------------------------

Query:  -TTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINAL---------------------ECM
         +  +VIS CA+LG LD+AKW+ + +  NG    LS+NNALI+MY KCG  +  R+VF K P++N +SW+ MINAL                     E  
Subjt:  -TTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINAL---------------------ECM

Query:  EI----------HGGLVEEGRRIFHSLTND------------------------EALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK
        E+          H GLVEEG++IF S+T++                        EALE+IE+MP A N +IWGSLM+AC +HGE ELG+FAAK
Subjt:  EI----------HGGLVEEGRRIFHSLTND------------------------EALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK

Q9FJY7 Pentatricopeptide repeat-containing protein At5g665203.0e-2830.95Show/hide
Query:  SALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQMSPC----FRSTTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALSV
        +++I  Y   G MD+A  L+ K++ K  +  T M+SG  +     +A  +F +M          +  N +S CA LGAL+Q KWI +Y++K        +
Subjt:  SALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQMSPC----FRSTTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALSV

Query:  NNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINAL-----------ECMEI--------------------HGGLVEEGRRIFHSLTN--------
           LIDMY KCG  E   EVF    KK+  +WT +I+             + ME+                    + GLVEEG+ IF+S+          
Subjt:  NNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINAL-----------ECMEI--------------------HGGLVEEGRRIFHSLTN--------

Query:  ----------------DEALEMIEAMPFAPNAIIWGSLMAACHVHGETELGE
                        DEA   I+ MP  PNA+IWG+L+ AC +H   ELGE
Subjt:  ----------------DEALEMIEAMPFAPNAIIWGSLMAACHVHGETELGE

Q9LSB8 Putative pentatricopeptide repeat-containing protein At3g159307.1e-3027.24Show/hide
Query:  RLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM-----------------SPCFRS------------------TT
        RL +AL+  YA+CG MD+A  ++  +  + ++  T++V G  + G +  AR  FDQM                 + CF                    T 
Subjt:  RLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM-----------------SPCFRS------------------TT

Query:  RNVISDCAHLGALDQAKWIQNYVDKNGFGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINAL-------ECMEI---------------
         +V++ CAHLG+L+  +WI+ Y+DKN     + V NALIDMY KCG  E  ++VF    +++  +WT M+  L       E +++               
Subjt:  RNVISDCAHLGALDQAKWIQNYVDKNGFGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINAL-------ECMEI---------------

Query:  ---------HGGLVEEGRRIFHSLTND------------------------EALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK
                 H G+V++ R+ F  + +D                        EA E++  MP  PN+I+WG+L+ A  +H +  + E AAK
Subjt:  ---------HGGLVEEGRRIFHSLTND------------------------EALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK

Q9LTV8 Pentatricopeptide repeat-containing protein At3g127707.1e-3030.53Show/hide
Query:  MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM-----SPCFRSTTRNVISDCAHLGALDQAKWIQNYVDKNG
        ++P L  +L TMYA CG +  A  L++K+    +++  AM+SG AK G   +A ++F +M      P   S T + IS CA +G+L+QA+ +  YV ++ 
Subjt:  MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM-----SPCFRSTTRNVISDCAHLGALDQAKWIQNYVDKNG

Query:  FGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMI-------NALECMEI------------------------HGGLVEEGRRIFHSLTN-
        +   + +++ALIDM+ KCGS EG R VF +T  ++ + W+ MI        A E + +                        H G+V EG   F+ + + 
Subjt:  FGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMI-------NALECMEI------------------------HGGLVEEGRRIFHSLTN-

Query:  ----------------------DEALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK
                              D+A E+I+ MP  P   +WG+L++AC  H   ELGE+AA+
Subjt:  ----------------------DEALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK

Q9LUJ2 Pentatricopeptide repeat-containing protein At3g226905.8e-3229.57Show/hide
Query:  SALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQMSP-----CFRSTTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALS
        ++++  Y   G +D AW+ +E +  K +V    ++SGL +G    +A  VF  M           T  ++ S C HLGALD AKWI  Y++KNG    + 
Subjt:  SALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQMSP-----CFRSTTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALS

Query:  VNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMI-------NALECMEI------------------------HGGLVEEGRRIFHSLTN-------
        +   L+DM+ +CG PE    +F     ++  +WT  I       NA   +E+                        HGGLV++G+ IF+S+         
Subjt:  VNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMI-------NALECMEI------------------------HGGLVEEGRRIFHSLTN-------

Query:  -----------------DEALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK
                         +EA+++IE MP  PN +IW SL+AAC V G  E+  +AA+
Subjt:  -----------------DEALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK

Arabidopsis top hitse value%identityAlignment
AT3G12770.1 mitochondrial editing factor 225.0e-3130.53Show/hide
Query:  MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM-----SPCFRSTTRNVISDCAHLGALDQAKWIQNYVDKNG
        ++P L  +L TMYA CG +  A  L++K+    +++  AM+SG AK G   +A ++F +M      P   S T + IS CA +G+L+QA+ +  YV ++ 
Subjt:  MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM-----SPCFRSTTRNVISDCAHLGALDQAKWIQNYVDKNG

Query:  FGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMI-------NALECMEI------------------------HGGLVEEGRRIFHSLTN-
        +   + +++ALIDM+ KCGS EG R VF +T  ++ + W+ MI        A E + +                        H G+V EG   F+ + + 
Subjt:  FGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMI-------NALECMEI------------------------HGGLVEEGRRIFHSLTN-

Query:  ----------------------DEALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK
                              D+A E+I+ MP  P   +WG+L++AC  H   ELGE+AA+
Subjt:  ----------------------DEALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK

AT3G15930.1 Pentatricopeptide repeat (PPR) superfamily protein5.0e-3127.24Show/hide
Query:  RLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM-----------------SPCFRS------------------TT
        RL +AL+  YA+CG MD+A  ++  +  + ++  T++V G  + G +  AR  FDQM                 + CF                    T 
Subjt:  RLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM-----------------SPCFRS------------------TT

Query:  RNVISDCAHLGALDQAKWIQNYVDKNGFGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINAL-------ECMEI---------------
         +V++ CAHLG+L+  +WI+ Y+DKN     + V NALIDMY KCG  E  ++VF    +++  +WT M+  L       E +++               
Subjt:  RNVISDCAHLGALDQAKWIQNYVDKNGFGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINAL-------ECMEI---------------

Query:  ---------HGGLVEEGRRIFHSLTND------------------------EALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK
                 H G+V++ R+ F  + +D                        EA E++  MP  PN+I+WG+L+ A  +H +  + E AAK
Subjt:  ---------HGGLVEEGRRIFHSLTND------------------------EALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK

AT3G22690.1 CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885)4.1e-3329.57Show/hide
Query:  SALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQMSP-----CFRSTTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALS
        ++++  Y   G +D AW+ +E +  K +V    ++SGL +G    +A  VF  M           T  ++ S C HLGALD AKWI  Y++KNG    + 
Subjt:  SALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQMSP-----CFRSTTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALS

Query:  VNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMI-------NALECMEI------------------------HGGLVEEGRRIFHSLTN-------
        +   L+DM+ +CG PE    +F     ++  +WT  I       NA   +E+                        HGGLV++G+ IF+S+         
Subjt:  VNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMI-------NALECMEI------------------------HGGLVEEGRRIFHSLTN-------

Query:  -----------------DEALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK
                         +EA+++IE MP  PN +IW SL+AAC V G  E+  +AA+
Subjt:  -----------------DEALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK

AT3G22690.2 INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification4.1e-3329.57Show/hide
Query:  SALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQMSP-----CFRSTTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALS
        ++++  Y   G +D AW+ +E +  K +V    ++SGL +G    +A  VF  M           T  ++ S C HLGALD AKWI  Y++KNG    + 
Subjt:  SALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQMSP-----CFRSTTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALS

Query:  VNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMI-------NALECMEI------------------------HGGLVEEGRRIFHSLTN-------
        +   L+DM+ +CG PE    +F     ++  +WT  I       NA   +E+                        HGGLV++G+ IF+S+         
Subjt:  VNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMI-------NALECMEI------------------------HGGLVEEGRRIFHSLTN-------

Query:  -----------------DEALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK
                         +EA+++IE MP  PN +IW SL+AAC V G  E+  +AA+
Subjt:  -----------------DEALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK

AT4G14820.1 Pentatricopeptide repeat (PPR) superfamily protein4.5e-4837.54Show/hide
Query:  MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQMSP----CFRS------------------------------
        MD  L +AL+TMYA  G MD+A + + K+S + + V TAMVSG +K G++ DA+ +FDQ       C+ +                              
Subjt:  MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQMSP----CFRS------------------------------

Query:  -TTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINAL---------------------ECM
         +  +VIS CA+LG LD+AKW+ + +  NG    LS+NNALI+MY KCG  +  R+VF K P++N +SW+ MINAL                     E  
Subjt:  -TTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALSVNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINAL---------------------ECM

Query:  EI----------HGGLVEEGRRIFHSLTND------------------------EALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK
        E+          H GLVEEG++IF S+T++                        EALE+IE+MP A N +IWGSLM+AC +HGE ELG+FAAK
Subjt:  EI----------HGGLVEEGRRIFHSLTND------------------------EALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCTCGCTTACGAAGTGCTCTCATCACGATGTATGCAAGCTGTGGCGCCATGGACTTGGCTTGGGATTTGTATGAAAAGATTTCCCCTAAATACATGGTTGTCTT
GACTGCCATGGTTTCTGGGCTTGCAAAAGGTGGAAAAATTGGAGATGCTCGCAATGTCTTTGATCAAATGTCACCATGCTTTAGATCAACAACTAGAAATGTCATTTCAG
ATTGTGCTCATCTTGGCGCTTTAGATCAAGCCAAATGGATACAAAATTATGTTGATAAAAATGGGTTTGGCAAGGCATTATCTGTCAATAATGCACTCATTGATATGTAT
GTCAAATGCGGGAGTCCAGAAGGAGGAAGAGAAGTTTTTGGAAAGACGCCAAAGAAAAATGCAATATCTTGGACAATTATGATTAATGCTCTTGAATGCATGGAGATCCA
TGGAGGTCTAGTTGAGGAAGGCCGAAGAATATTTCATTCACTGACCAATGATGAAGCTCTTGAGATGATTGAGGCAATGCCCTTTGCTCCTAATGCTATCATTTGGGGGT
CCCTTATGGCTGCTTGTCATGTCCATGGTGAGACTGAGTTAGGAGAATTTGCTGCTAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCCTCGCTTACGAAGTGCTCTCATCACGATGTATGCAAGCTGTGGCGCCATGGACTTGGCTTGGGATTTGTATGAAAAGATTTCCCCTAAATACATGGTTGTCTT
GACTGCCATGGTTTCTGGGCTTGCAAAAGGTGGAAAAATTGGAGATGCTCGCAATGTCTTTGATCAAATGTCACCATGCTTTAGATCAACAACTAGAAATGTCATTTCAG
ATTGTGCTCATCTTGGCGCTTTAGATCAAGCCAAATGGATACAAAATTATGTTGATAAAAATGGGTTTGGCAAGGCATTATCTGTCAATAATGCACTCATTGATATGTAT
GTCAAATGCGGGAGTCCAGAAGGAGGAAGAGAAGTTTTTGGAAAGACGCCAAAGAAAAATGCAATATCTTGGACAATTATGATTAATGCTCTTGAATGCATGGAGATCCA
TGGAGGTCTAGTTGAGGAAGGCCGAAGAATATTTCATTCACTGACCAATGATGAAGCTCTTGAGATGATTGAGGCAATGCCCTTTGCTCCTAATGCTATCATTTGGGGGT
CCCTTATGGCTGCTTGTCATGTCCATGGTGAGACTGAGTTAGGAGAATTTGCTGCTAAGTAA
Protein sequenceShow/hide protein sequence
MDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQMSPCFRSTTRNVISDCAHLGALDQAKWIQNYVDKNGFGKALSVNNALIDMY
VKCGSPEGGREVFGKTPKKNAISWTIMINALECMEIHGGLVEEGRRIFHSLTNDEALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK