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CSPI03G13190 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G13190
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr3:9966478..9966874
RNA-Seq ExpressionCSPI03G13190
SyntenyCSPI03G13190
Gene Ontology termsGO:0001172 - transcription, RNA-templated (biological process)
GO:0003968 - RNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5587814.1 hypothetical protein H5410_048248 [Solanum commersonii]4.1e-2387.1Show/hide
Query:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPPKQ
        MGWLQSLFSPLKKLWFRLHS+PKKR+GIYILYEDVKSCPCEDV VLWSILVESH   LPP++
Subjt:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPPKQ

KAG6597448.1 hypothetical protein SDJN03_10628, partial [Cucurbita argyrosperma subsp. sororia]1.7e-2496.43Show/hide
Query:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHTP
        MGWLQSLFSPLKKLWFRLHSSP+KR+GIYILYEDVKSCPCEDVHVLWSILVESHTP
Subjt:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHTP

KGN56989.1 hypothetical protein Csa_010650 [Cucumis sativus]3.3e-2898.36Show/hide
Query:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPKQ
        MGWLQSLFSPLKKLWFRLHSSPKKR+GIYILYEDVKSCPCEDVHVLWSILVESHTPLPPKQ
Subjt:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPKQ

PHT38775.1 hypothetical protein CQW23_22348 [Capsicum baccatum]4.9e-2488.71Show/hide
Query:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPPKQ
        MGWLQSLFSPLKKLWFRLHS+PKKR+GIYILYEDVKSCPCEDV VLWSILVESH  PLPP++
Subjt:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPPKQ

POO02187.1 hypothetical protein TorRG33x02_019710 [Trema orientale]7.0e-2391.67Show/hide
Query:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK
        MGWLQSLFSPLKKLWFRLHS+PKKR+GIYILYEDVKSCP EDVHVLWSILVESHT LP K
Subjt:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK

TrEMBL top hitse value%identityAlignment
A0A0A0L7K5 Uncharacterized protein1.6e-2898.36Show/hide
Query:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPKQ
        MGWLQSLFSPLKKLWFRLHSSPKKR+GIYILYEDVKSCPCEDVHVLWSILVESHTPLPPKQ
Subjt:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPKQ

A0A0V0GKY9 Putative ovule protein2.0e-2387.1Show/hide
Query:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPPKQ
        MGWLQSLFSPLKKLWFRLHS+PKKR+GIYILYEDVKSCPCEDV VLWSILVESH   LPP++
Subjt:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPPKQ

A0A2G2W0L8 Uncharacterized protein2.4e-2488.71Show/hide
Query:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPPKQ
        MGWLQSLFSPLKKLWFRLHS+PKKR+GIYILYEDVKSCPCEDV VLWSILVESH  PLPP++
Subjt:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPPKQ

A0A2G2ZVG2 Uncharacterized protein2.4e-2488.71Show/hide
Query:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPPKQ
        MGWLQSLFSPLKKLWFRLHS+PKKR+GIYILYEDVKSCPCEDV VLWSILVESH  PLPP++
Subjt:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPPKQ

M1CYA3 Uncharacterized protein2.0e-2387.1Show/hide
Query:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPPKQ
        MGWLQSLFSPLKKLWFRLHS+PKKR+GIYILYEDVKSCPCEDV VLWSILVESH   LPP++
Subjt:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPPKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTGGCTCCAATCCCTCTTCTCCCCATTAAAGAAGCTCTGGTTTCGCCTCCATTCTTCGCCTAAAAAACGTAAAGGGATATATATTCTGTATGAGGATGTGAAATC
CTGTCCCTGTGAAGATGTGCATGTGCTTTGGTCAATATTAGTGGAATCACACACTCCATTGCCACCGAAACAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGTGGCTCCAATCCCTCTTCTCCCCATTAAAGAAGCTCTGGTTTCGCCTCCATTCTTCGCCTAAAAAACGTAAAGGGATATATATTCTGTATGAGGATGTGAAATC
CTGTCCCTGTGAAGATGTGCATGTGCTTTGGTCAATATTAGTGGAATCACACACTCCATTGCCACCGAAACAA
Protein sequenceShow/hide protein sequence
MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPKQ