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CSPI03G13970 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G13970
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionBHLH domain-containing protein
Genome locationChr3:10522379..10523304
RNA-Seq ExpressionCSPI03G13970
SyntenyCSPI03G13970
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134190.1 transcription factor bHLH95 [Cucumis sativus]4.0e-9999.01Show/hide
Query:  MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRAMEANGGVQKKEKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK
        MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRA+EANGGVQKKEKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK
Subjt:  MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRAMEANGGVQKKEKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK

Query:  KSSESVALLPNTNSDSSSGINGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDILGL
        KSSESVALLPNTNSDSS GINGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDILGL
Subjt:  KSSESVALLPNTNSDSSSGINGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDILGL

Query:  KK
        KK
Subjt:  KK

XP_016898986.1 PREDICTED: transcription factor bHLH95-like [Cucumis melo]1.3e-9495.05Show/hide
Query:  MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRAMEANGGVQKKEKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK
        MEACSDSV+PLFPLILP+HHFEATEKEASASRKRCRA+EANGGVQKKEKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK
Subjt:  MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRAMEANGGVQKKEKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK

Query:  KSSESVALLPNTNSDSSSGINGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDILGL
        KSSESV LLPN+NSDSS G NGDGVIVSISGNIVLFGVIIASVQRG+VTQILLVFERHK EVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDIL L
Subjt:  KSSESVALLPNTNSDSSSGINGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDILGL

Query:  KK
        KK
Subjt:  KK

XP_022955986.1 uncharacterized protein LOC111457820 [Cucurbita moschata]1.2e-7479.21Show/hide
Query:  MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRAMEANGGVQKKEKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK
        MEAC+DSV+ L P ILPVH  EA E +AS SRKR RA+EANGGVQ+K +EKRKEMSESFDVL+SLVPNLSPKATRETIVS  IQFIE LQKQLMRLEMEK
Subjt:  MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRAMEANGGVQKKEKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK

Query:  KSSESVALLPNTNSDSSSGINGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDILGL
        K  ESV +LP+TNSDS  G    GVIVS+S NIVLFG+I ASV+RG+VTQIL+ FERH+AEVLAANV VSHGNLTLTVTASVHGYVENTIEQIRNDIL L
Subjt:  KSSESVALLPNTNSDSSSGINGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDILGL

Query:  KK
        KK
Subjt:  KK

XP_022979931.1 uncharacterized protein LOC111479473 [Cucurbita maxima]6.9e-7578.82Show/hide
Query:  MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRAMEANGGVQKKEKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK
        MEAC+DSV+ L P ILPVH  EA E +AS SRKR RA+EANGG Q+K +EKRKEMSESFDVL+SLVPNLSPKATRETIVS  IQFIE LQKQLMRLEMEK
Subjt:  MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRAMEANGGVQKKEKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK

Query:  KSSESVALLPNTNSDSSSGINGD-GVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDILG
        K  ESV +LP+TNSDS  G  GD GVIVS+S NIVLFG+I ASV+RG+VT+IL+ FERH+AEVLAANV VSHGNLTLTVTASVHGYVENTIEQIRNDIL 
Subjt:  KSSESVALLPNTNSDSSSGINGD-GVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDILG

Query:  LKK
        LKK
Subjt:  LKK

XP_038885840.1 transcription factor bHLH95-like [Benincasa hispida]9.6e-8586.63Show/hide
Query:  MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRAMEANGGVQKKEKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK
        MEAC+DSV+PLFPLILPVH  EATEK+ASASRKR RA+EANGGVQKKE+EKRKEMSESFDVL+SLVPNLSPKATRETIVS  IQFIEFLQKQLMRLEMEK
Subjt:  MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRAMEANGGVQKKEKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK

Query:  KSSESVALLPNTNSDSSSGINGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDILGL
        KSSESV +LP+TNSDSS G  G GVIVS+SGNIVLFG+IIASVQRG+VTQIL+VFERH+AEVLAANV VSHGNLTLTVTASVHGYVENTIE I+NDIL L
Subjt:  KSSESVALLPNTNSDSSSGINGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDILGL

Query:  KK
        KK
Subjt:  KK

TrEMBL top hitse value%identityAlignment
A0A0A0L5R7 BHLH domain-containing protein2.0e-9999.01Show/hide
Query:  MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRAMEANGGVQKKEKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK
        MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRA+EANGGVQKKEKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK
Subjt:  MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRAMEANGGVQKKEKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK

Query:  KSSESVALLPNTNSDSSSGINGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDILGL
        KSSESVALLPNTNSDSS GINGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDILGL
Subjt:  KSSESVALLPNTNSDSSSGINGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDILGL

Query:  KK
        KK
Subjt:  KK

A0A1S4DSM0 transcription factor bHLH95-like6.5e-9595.05Show/hide
Query:  MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRAMEANGGVQKKEKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK
        MEACSDSV+PLFPLILP+HHFEATEKEASASRKRCRA+EANGGVQKKEKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK
Subjt:  MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRAMEANGGVQKKEKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK

Query:  KSSESVALLPNTNSDSSSGINGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDILGL
        KSSESV LLPN+NSDSS G NGDGVIVSISGNIVLFGVIIASVQRG+VTQILLVFERHK EVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDIL L
Subjt:  KSSESVALLPNTNSDSSSGINGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDILGL

Query:  KK
        KK
Subjt:  KK

A0A5A7U767 Transcription factor bHLH95-like6.5e-9595.05Show/hide
Query:  MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRAMEANGGVQKKEKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK
        MEACSDSV+PLFPLILP+HHFEATEKEASASRKRCRA+EANGGVQKKEKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK
Subjt:  MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRAMEANGGVQKKEKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK

Query:  KSSESVALLPNTNSDSSSGINGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDILGL
        KSSESV LLPN+NSDSS G NGDGVIVSISGNIVLFGVIIASVQRG+VTQILLVFERHK EVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDIL L
Subjt:  KSSESVALLPNTNSDSSSGINGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDILGL

Query:  KK
        KK
Subjt:  KK

A0A6J1GWN9 uncharacterized protein LOC1114578205.7e-7579.21Show/hide
Query:  MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRAMEANGGVQKKEKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK
        MEAC+DSV+ L P ILPVH  EA E +AS SRKR RA+EANGGVQ+K +EKRKEMSESFDVL+SLVPNLSPKATRETIVS  IQFIE LQKQLMRLEMEK
Subjt:  MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRAMEANGGVQKKEKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK

Query:  KSSESVALLPNTNSDSSSGINGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDILGL
        K  ESV +LP+TNSDS  G    GVIVS+S NIVLFG+I ASV+RG+VTQIL+ FERH+AEVLAANV VSHGNLTLTVTASVHGYVENTIEQIRNDIL L
Subjt:  KSSESVALLPNTNSDSSSGINGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDILGL

Query:  KK
        KK
Subjt:  KK

A0A6J1IS55 uncharacterized protein LOC1114794733.4e-7578.82Show/hide
Query:  MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRAMEANGGVQKKEKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK
        MEAC+DSV+ L P ILPVH  EA E +AS SRKR RA+EANGG Q+K +EKRKEMSESFDVL+SLVPNLSPKATRETIVS  IQFIE LQKQLMRLEMEK
Subjt:  MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRAMEANGGVQKKEKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK

Query:  KSSESVALLPNTNSDSSSGINGD-GVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDILG
        K  ESV +LP+TNSDS  G  GD GVIVS+S NIVLFG+I ASV+RG+VT+IL+ FERH+AEVLAANV VSHGNLTLTVTASVHGYVENTIEQIRNDIL 
Subjt:  KSSESVALLPNTNSDSSSGINGD-GVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDILG

Query:  LKK
        LKK
Subjt:  LKK

SwissProt top hitse value%identityAlignment
Q9FXA3 Transcription factor bHLH952.1e-0526.21Show/hide
Query:  EKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK-------------------------KSSESVALLPNTN---------
        E+E+RK+M + F  L +L+P L PKA + TIV  A+  I+ L++ L +LEM+K                          SS +  L P +N         
Subjt:  EKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK-------------------------KSSESVALLPNTN---------

Query:  ------------SDSSSG------------INGD-----GVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTASVHG
                    S SS+             +N D      V+++I GN   F + +   + G+ T +  +FE++  EVL ANV  +    T  + A V+ 
Subjt:  ------------SDSSSG------------INGD-----GVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTASVHG

Query:  YVENTI
          EN +
Subjt:  YVENTI

Arabidopsis top hitse value%identityAlignment
AT1G49770.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.5e-0626.21Show/hide
Query:  EKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK-------------------------KSSESVALLPNTN---------
        E+E+RK+M + F  L +L+P L PKA + TIV  A+  I+ L++ L +LEM+K                          SS +  L P +N         
Subjt:  EKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK-------------------------KSSESVALLPNTN---------

Query:  ------------SDSSSG------------INGD-----GVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTASVHG
                    S SS+             +N D      V+++I GN   F + +   + G+ T +  +FE++  EVL ANV  +    T  + A V+ 
Subjt:  ------------SDSSSG------------INGD-----GVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTASVHG

Query:  YVENTI
          EN +
Subjt:  YVENTI

AT3G24140.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein8.0e-0532.41Show/hide
Query:  TEKEASASRKRCRAMEANGGVQKK-------EKEKRKEMSESFDVLRSLVP-NLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKS---SESVALLPNT
        T+KE  + RKR R  + +  V+ +       E+ +RK+M+E   VLRSL+P +   +  + +I+ GAI+F+  L++ L  LE +K+     E+   +  T
Subjt:  TEKEASASRKRCRAMEANGGVQKK-------EKEKRKEMSESFDVLRSLVP-NLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKS---SESVALLPNT

Query:  NSDSSSGI
         + SSS I
Subjt:  NSDSSSGI

AT5G46690.1 beta HLH protein 718.9e-0435.06Show/hide
Query:  EKEKRKEMSESFDVLRSLVPN-LSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSSGINGD
        E+ +R++M++   VLRSL+P   + K  + +IV GAI FI+ L+ +L+ LE +K    +  L  +  S +S   NG+
Subjt:  EKEKRKEMSESFDVLRSLVPN-LSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSSGINGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCCTGTTCCGACTCTGTGATTCCACTTTTCCCCCTCATTTTGCCGGTACATCACTTTGAAGCCACTGAAAAGGAGGCTTCGGCCTCAAGGAAGCGTTGCAGAGC
TATGGAAGCCAACGGCGGAGTACAGAAGAAAGAGAAGGAGAAAAGGAAGGAGATGAGTGAGAGTTTCGATGTTCTTCGATCTCTCGTTCCGAATCTCTCTCCTAAGGCTA
CGAGAGAGACTATTGTTTCTGGAGCGATTCAGTTCATCGAGTTTCTTCAGAAGCAGTTGATGAGGCTGGAAATGGAGAAGAAATCATCGGAATCGGTGGCGCTGCTTCCG
AATACCAATTCGGATTCATCAAGCGGCATTAATGGCGACGGCGTCATTGTCTCAATCTCCGGCAACATTGTGTTGTTTGGGGTTATTATTGCTTCTGTTCAACGAGGTAT
TGTGACACAGATTTTACTGGTGTTTGAAAGACACAAGGCTGAAGTTCTTGCAGCGAATGTTGTAGTCAGCCATGGAAATTTAACTTTAACAGTCACAGCTTCTGTACACG
GTTACGTAGAGAATACCATAGAGCAGATTAGAAATGATATCCTAGGCTTAAAGAAGTAA
mRNA sequenceShow/hide mRNA sequence
TTTTTTTTTGGAATATTTTCAATCATTTTCTTCTTCCATTTCTGAATTTGATCGATCTCTCTCTCTCTCCCACGCACATTGTTCTATCCTTCTTATTGCTTCATAAAAAG
CTTCATCAATGGCGGATTAAAGAAACAAACCAACAACAGAAGATCAGCAAGCTTCTGTTTGTACTAATGGAAGCCTGTTCCGACTCTGTGATTCCACTTTTCCCCCTCAT
TTTGCCGGTACATCACTTTGAAGCCACTGAAAAGGAGGCTTCGGCCTCAAGGAAGCGTTGCAGAGCTATGGAAGCCAACGGCGGAGTACAGAAGAAAGAGAAGGAGAAAA
GGAAGGAGATGAGTGAGAGTTTCGATGTTCTTCGATCTCTCGTTCCGAATCTCTCTCCTAAGGCTACGAGAGAGACTATTGTTTCTGGAGCGATTCAGTTCATCGAGTTT
CTTCAGAAGCAGTTGATGAGGCTGGAAATGGAGAAGAAATCATCGGAATCGGTGGCGCTGCTTCCGAATACCAATTCGGATTCATCAAGCGGCATTAATGGCGACGGCGT
CATTGTCTCAATCTCCGGCAACATTGTGTTGTTTGGGGTTATTATTGCTTCTGTTCAACGAGGTATTGTGACACAGATTTTACTGGTGTTTGAAAGACACAAGGCTGAAG
TTCTTGCAGCGAATGTTGTAGTCAGCCATGGAAATTTAACTTTAACAGTCACAGCTTCTGTACACGGTTACGTAGAGAATACCATAGAGCAGATTAGAAATGATATCCTA
GGCTTAAAGAAGTAATAACTTCCATTATATTCACGAG
Protein sequenceShow/hide protein sequence
MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRAMEANGGVQKKEKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLP
NTNSDSSSGINGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDILGLKK