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CSPI03G14210 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G14210
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionE3 ubiquitin-protein ligase RBBP6 isoform X2
Genome locationChr3:10674920..10676408
RNA-Seq ExpressionCSPI03G14210
SyntenyCSPI03G14210
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134201.1 uncharacterized protein LOC101221899 isoform X2 [Cucumis sativus]4.5e-74100Show/hide
Query:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
        MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
Subjt:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGGKPKKKLRL
        EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGGKPKKKLRL
Subjt:  EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGGKPKKKLRL
XP_008438870.1 PREDICTED: uncharacterized protein LOC103483832 [Cucumis melo]1.3e-6896.03Show/hide
Query:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
        MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKL+QDPNA SSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
Subjt:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGGKPKKK
        EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVG  P  K
Subjt:  EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGGKPKKK
XP_022956119.1 uncharacterized protein LOC111457905 isoform X2 [Cucurbita moschata]2.2e-6087.34Show/hide
Query:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP
        +MEDL+EEERRALRGSKFAPLPSQ TSSRSHPRLAHPGGPLKTNKAAALAKFL RKL+QDPN LSSINPQIL+LAVRNAKASV  SSGTNIRHVDTFDDP
Subjt:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSEPKKQKKKNKK-KKNKN---KKNKRQKIVEDSECGVGGKPKKKLRL
        EASFD+GE+MNSEPKKQK KNKK KKNKN   KKNKRQKIVEDS CGVG +PKKKL+L
Subjt:  EASFDEGESMNSEPKKQKKKNKK-KKNKN---KKNKRQKIVEDSECGVGGKPKKKLRL
XP_022979960.1 uncharacterized protein LOC111479494 [Cucurbita maxima]8.2e-6087.1Show/hide
Query:  MEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDPE
        MEDL+EEERRALRGSKFAPLPSQ TSSRSHPRLAHPGGPLKTNKAAALAKFL RKL+QDPN LSSINPQIL+LAVRNAKASV  SSGTNIRHVDTFDDPE
Subjt:  MEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDPE

Query:  ASFDEGESMNSEPKKQKKKNK--KKKNKNKKNKRQKIVEDSECGVGGKPKKKLRL
        ASFD+GE+MNSEPKKQK KNK  KK  K KKNKRQKIVEDS CGVG +PKKKL+L
Subjt:  ASFDEGESMNSEPKKQKKKNK--KKKNKNKKNKRQKIVEDSECGVGGKPKKKLRL
XP_031739377.1 uncharacterized protein LOC101221899 isoform X1 [Cucumis sativus]4.6e-6399.26Show/hide
Query:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
        MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
Subjt:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKI
        EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQK+
Subjt:  EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKI
TrEMBL top hitse value%identityAlignment
A0A0A0LAK0 Uncharacterized protein2.2e-74100Show/hide
Query:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
        MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
Subjt:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGGKPKKKLRL
        EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGGKPKKKLRL
Subjt:  EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGGKPKKKLRL
A0A1S3AY37 uncharacterized protein LOC1034838326.1e-6996.03Show/hide
Query:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
        MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKL+QDPNA SSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
Subjt:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGGKPKKK
        EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVG  P  K
Subjt:  EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGGKPKKK
A0A6J1GVW4 uncharacterized protein LOC111457905 isoform X12.6e-5986.79Show/hide
Query:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP
        +MEDL+EEERRALRGSKFAPLPSQ TSSRSHPRLAHPGGPLKTNKAAALAKFL RKL+QDPN LSSINPQIL+LAVRNAKASV  SSGTNIRHVDTFDDP
Subjt:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSEPKKQKKKNKK-KKNKN---KKNKRQ-KIVEDSECGVGGKPKKKLRL
        EASFD+GE+MNSEPKKQK KNKK KKNKN   KKNKRQ KIVEDS CGVG +PKKKL+L
Subjt:  EASFDEGESMNSEPKKQKKKNKK-KKNKN---KKNKRQ-KIVEDSECGVGGKPKKKLRL
A0A6J1GY51 uncharacterized protein LOC111457905 isoform X21.0e-6087.34Show/hide
Query:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP
        +MEDL+EEERRALRGSKFAPLPSQ TSSRSHPRLAHPGGPLKTNKAAALAKFL RKL+QDPN LSSINPQIL+LAVRNAKASV  SSGTNIRHVDTFDDP
Subjt:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSEPKKQKKKNKK-KKNKN---KKNKRQKIVEDSECGVGGKPKKKLRL
        EASFD+GE+MNSEPKKQK KNKK KKNKN   KKNKRQKIVEDS CGVG +PKKKL+L
Subjt:  EASFDEGESMNSEPKKQKKKNKK-KKNKN---KKNKRQKIVEDSECGVGGKPKKKLRL
A0A6J1IUT6 uncharacterized protein LOC1114794944.0e-6087.1Show/hide
Query:  MEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDPE
        MEDL+EEERRALRGSKFAPLPSQ TSSRSHPRLAHPGGPLKTNKAAALAKFL RKL+QDPN LSSINPQIL+LAVRNAKASV  SSGTNIRHVDTFDDPE
Subjt:  MEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDPE

Query:  ASFDEGESMNSEPKKQKKKNK--KKKNKNKKNKRQKIVEDSECGVGGKPKKKLRL
        ASFD+GE+MNSEPKKQK KNK  KK  K KKNKRQKIVEDS CGVG +PKKKL+L
Subjt:  ASFDEGESMNSEPKKQKKKNK--KKKNKNKKNKRQKIVEDSECGVGGKPKKKLRL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18540.1 unknown protein4.5e-3258.18Show/hide
Query:  EDLTEEERRALRGSKFAPLPSQSTSSRSH-PRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASV-----HSSGTNIRHVDTF
        E+LTE+E+RALRGSKFAPL S  +SSRS  PRLAHPGGPLKTNKAAALAKFL RKL QDPN L+SI+P +++LAV+NAK +V      SSG  I+HV +F
Subjt:  EDLTEEERRALRGSKFAPLPSQSTSSRSH-PRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASV-----HSSGTNIRHVDTF

Query:  DDPEASFD----EGESMNSEPKK---QKKKNKKKKNKNKKNKRQKIV-EDSECGVGGKPKKKLRL
        +D E S D    E   +N + KK   +KKK +KKK KNKK+K+Q  V ED++     +P KKL+L
Subjt:  DDPEASFD----EGESMNSEPKK---QKKKNKKKKNKNKKNKRQKIV-EDSECGVGGKPKKKLRL
AT5G18540.2 unknown protein2.4e-3357.14Show/hide
Query:  EDLTEEERRALRGSKFAPLPSQSTSSRSH-PRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASV-----HSSGTNIRHVDTF
        E+LTE+E+RALRGSKFAPL S  +SSRS  PRLAHPGGPLKTNKAAALAKFL RKL QDPN L+SI+P +++LAV+NAK +V      SSG  I+HV +F
Subjt:  EDLTEEERRALRGSKFAPLPSQSTSSRSH-PRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASV-----HSSGTNIRHVDTF

Query:  DDPEASFD----EGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGGKPKKKLRL
        +D E S D    E   +N + KK+  K KK++ K KKNK+ KI  D +  +  +P KKL+L
Subjt:  DDPEASFD----EGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGGKPKKKLRL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGATGGAAGATCTTACCGAAGAAGAAAGACGAGCTTTACGCGGAAGCAAGTTCGCTCCTCTCCCATCGCAATCCACTTCTTCTCGATCTCACCCAAGGTTGGCTCA
TCCAGGTGGACCATTGAAAACCAACAAAGCCGCGGCTCTCGCTAAGTTTCTTCACCGGAAATTGAACCAAGATCCTAATGCTCTCTCTTCTATTAATCCTCAGATTTTGG
ACCTTGCTGTTCGTAATGCCAAAGCCTCTGTTCATTCCAGTGGTACAAATATCCGGCATGTGGACACATTTGATGACCCTGAGGCTTCTTTTGATGAAGGGGAATCTATG
AATTCTGAGCCTAAGAAACAAAAGAAGAAGAACAAGAAGAAGAAAAATAAGAATAAGAAGAATAAAAGGCAAAAGATTGTTGAGGACTCCGAGTGTGGCGTTGGGGGAAA
ACCCAAAAAGAAGTTGAGATTGTGA
mRNA sequenceShow/hide mRNA sequence
TTTTTATTTTTTTTATTTTAAAAAACTATGTTAGAGAAAAAGAAAAAGGTATTTAGTGGTTCGACACGTCGTTCACGTGGAGCTCCTCCCTCCAACGGGACGACAAAACG
ACTTTGCTTTCTCATCCCCCAAAGAGAAGAAAGGAAGCGACGGGCGATGTCGTGAGATCTGCACAAAGCAAAAAGGGAACAGAATTCAAATTTCTGAAAGAATTTGGAAA
AAACAAAAAAACAAAAAATAGAGAAAATCCATAGCCAATGGTGATGGAAGATCTTACCGAAGAAGAAAGACGAGCTTTACGCGGAAGCAAGTTCGCTCCTCTCCCATCGC
AATCCACTTCTTCTCGATCTCACCCAAGGTTGGCTCATCCAGGTGGACCATTGAAAACCAACAAAGCCGCGGCTCTCGCTAAGTTTCTTCACCGGAAATTGAACCAAGAT
CCTAATGCTCTCTCTTCTATTAATCCTCAGATTTTGGACCTTGCTGTTCGTAATGCCAAAGCCTCTGTTCATTCCAGTGGTACAAATATCCGGCATGTGGACACATTTGA
TGACCCTGAGGCTTCTTTTGATGAAGGGGAATCTATGAATTCTGAGCCTAAGAAACAAAAGAAGAAGAACAAGAAGAAGAAAAATAAGAATAAGAAGAATAAAAGGCAAA
AGATTGTTGAGGACTCCGAGTGTGGCGTTGGGGGAAAACCCAAAAAGAAGTTGAGATTGTGAGCTTAAAGGGAAGGAAACACAACTGGAGATATTCAGTTTTCAGAAGAT
TGGAGAATTAACTTGAAAGGATGAACCTTTTTGGAAGCAAGGCAGTTAGTAAGCCCTACCGGGTTGCTGTTCCTGATGTTTTTGAGCAACGAGAACTATAAAGTCTCATC
ATATTCACGAGTCTAAAACAATTTGATTTCTCTAGTGAAAGAATGATGTTTAGCTTCTCTTACTCATGTTGCAGCATTCTTTTAGTTTGTTGGCAAATTGCAACTTTTTT
AAAATCCAATGACCTGAATTCCATTGTTTGTATGAGAAATCTTTTCCATCATTTAAATGCCACTTCTACTCATTTGA
Protein sequenceShow/hide protein sequence
MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDPEASFDEGESM
NSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGGKPKKKLRL