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CSPI03G14570 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G14570
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDynein light chain
Genome locationChr3:10875668..10878931
RNA-Seq ExpressionCSPI03G14570
SyntenyCSPI03G14570
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR019763 - Dynein light chain, type 1/2, conserved site
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134221.1 dynein light chain 1, cytoplasmic [Cucumis sativus]1.7e-6099.17Show/hide
Query:  MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MNQDSRR TNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
Subjt:  MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKAILLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

XP_016898981.1 PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo]6.6e-5794.17Show/hide
Query:  MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MN +SRR TNHPPP IVK ESTDDRKPSSP+PLSKKIVIKSADMFTDMQKEAID AIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
Subjt:  MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKAILLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

XP_022945423.1 dynein light chain 1, cytoplasmic-like [Cucurbita moschata]5.3e-4680.83Show/hide
Query:  MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MN DS+R  ++P P +VK ES +DRKPSS AP+ KKIVIKSADMF DMQKEA+D AIAAFEKHSVEKD+AEQIKKEFDK HGPTWHC++GRNFGSYVTHE
Subjt:  MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKA+LLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

XP_022973755.1 dynein light chain 1, cytoplasmic-like isoform X1 [Cucurbita maxima]3.4e-4580Show/hide
Query:  MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MN DS+R+    P  +VK ES +DRKPSS AP+ KKIVIKSADMF DMQKEA+D AIAAFEKHSVEKD+AEQIKKEFDK HGPTWHC++GRNFGSYVTHE
Subjt:  MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKA+LLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

XP_038904701.1 dynein light chain 1, cytoplasmic-like [Benincasa hispida]4.3e-4886.67Show/hide
Query:  MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MNQ+S R  ++PPP +VK ES DDRKPSS A +SKKIVIKSADMF+DMQKEAID AIAAFEKHSVEKDIAEQIKK+FDKNHGPTWHCIVGRNFGSYVTHE
Subjt:  MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKAILLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

TrEMBL top hitse value%identityAlignment
A0A0A0LAM1 Dynein light chain8.1e-6199.17Show/hide
Query:  MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MNQDSRR TNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
Subjt:  MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKAILLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

A0A1S4DSP2 Dynein light chain3.2e-5794.17Show/hide
Query:  MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MN +SRR TNHPPP IVK ESTDDRKPSSP+PLSKKIVIKSADMFTDMQKEAID AIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
Subjt:  MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKAILLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

A0A6J1C8U0 Dynein light chain9.0e-4477.5Show/hide
Query:  MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MNQD++R   +P   +VK ES +DRKPSS  PL++K+VIKSADMF DMQKEA+D AIAAFEK++VEKD+AEQIK+EFDK HGPTWHCIVGRNFGSYVTHE
Subjt:  MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKA+LLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

A0A6J1G0U9 Dynein light chain2.5e-4680.83Show/hide
Query:  MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MN DS+R  ++P P +VK ES +DRKPSS AP+ KKIVIKSADMF DMQKEA+D AIAAFEKHSVEKD+AEQIKKEFDK HGPTWHC++GRNFGSYVTHE
Subjt:  MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKA+LLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

A0A6J1IC60 Dynein light chain1.6e-4580Show/hide
Query:  MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MN DS+R+    P  +VK ES +DRKPSS AP+ KKIVIKSADMF DMQKEA+D AIAAFEKHSVEKD+AEQIKKEFDK HGPTWHC++GRNFGSYVTHE
Subjt:  MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKA+LLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

SwissProt top hitse value%identityAlignment
Q22799 Dynein light chain 1, cytoplasmic5.0e-3171.59Show/hide
Query:  LSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG
        + +K VIK+ADM  DMQ++AID A  A EK+++EKDIA  IKKEFDK + PTWHCIVGRNFGSYVTHET HF+YFYL Q AILLFKSG
Subjt:  LSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG

Q3MHR3 Dynein light chain 2, cytoplasmic8.5e-3172.09Show/hide
Query:  KKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG
        +K VIK+ADM  DMQ++A+D A  A EK+++EKDIA  IKKEFDK + PTWHCIVGRNFGSYVTHET HF+YFYL Q AILLFKSG
Subjt:  KKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG

Q78P75 Dynein light chain 2, cytoplasmic8.5e-3172.09Show/hide
Query:  KKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG
        +K VIK+ADM  DMQ++A+D A  A EK+++EKDIA  IKKEFDK + PTWHCIVGRNFGSYVTHET HF+YFYL Q AILLFKSG
Subjt:  KKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG

Q96FJ2 Dynein light chain 2, cytoplasmic8.5e-3172.09Show/hide
Query:  KKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG
        +K VIK+ADM  DMQ++A+D A  A EK+++EKDIA  IKKEFDK + PTWHCIVGRNFGSYVTHET HF+YFYL Q AILLFKSG
Subjt:  KKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG

Q9D0M5 Dynein light chain 2, cytoplasmic8.5e-3172.09Show/hide
Query:  KKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG
        +K VIK+ADM  DMQ++A+D A  A EK+++EKDIA  IKKEFDK + PTWHCIVGRNFGSYVTHET HF+YFYL Q AILLFKSG
Subjt:  KKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG

Arabidopsis top hitse value%identityAlignment
AT1G23220.1 Dynein light chain type 1 family protein1.3e-1341.67Show/hide
Query:  IKSADMFTDMQKEAIDTA---IAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKS
        ++++DM    Q  A   +   + A    +  K +A  +KK+FD  +GP WHCIVG +FGSYVTH T  F+YF +D+  +LLFK+
Subjt:  IKSADMFTDMQKEAIDTA---IAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKS

AT1G52240.2 RHO guanyl-nucleotide exchange factor 113.1e-1240.91Show/hide
Query:  LSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVE--KDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFK
        L  K +++ +DM   MQ +A+  A  A +   V   K IA  IKKEFD+ +G  W C+VG NFG + TH    F+YF L+    L+FK
Subjt:  LSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVE--KDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFK

AT4G15930.1 Dynein light chain type 1 family protein1.3e-3977.67Show/hide
Query:  DDRKPSSP-----APLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLF
        DDR+ S P      P  K+ VIKSADM  DMQKEAI+ AI+AFEK+SVEKDIAE IKKEFDK HG TWHCIVGRNFGSYVTHETNHFVYFYLDQKA+LLF
Subjt:  DDRKPSSP-----APLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLF

Query:  KSG
        KSG
Subjt:  KSG

AT4G27360.1 Dynein light chain type 1 family protein9.0e-1242.05Show/hide
Query:  LSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEK--DIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFK
        L  K V+   DM   M+++A+  A  A +   V +   IA  IKKEFD+++G  W CIVG +FGS+VTH +  F++F +    ILLFK
Subjt:  LSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEK--DIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFK

AT5G20110.1 Dynein light chain type 1 family protein5.1e-1550Show/hide
Query:  IKSADMFTDMQKEAIDTA---IAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKS
        I +ADM   MQ  A   A   + + EK S  K +A  +KKEFDK +GP WHCIVG +FGS+VTH T  F+YF +D+  +LLFK+
Subjt:  IKSADMFTDMQKEAIDTA---IAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCAAGATTCTCGCCGCGCCACCAATCATCCTCCACCTCCAATTGTCAAGCTTGAATCTACAGATGATCGCAAACCCTCATCTCCCGCTCCCCTCTCCAAGAAAAT
CGTCATCAAGAGCGCCGATATGTTCACTGACATGCAGAAGGAGGCTATTGACACTGCCATAGCCGCATTTGAGAAACATTCCGTTGAGAAGGATATTGCCGAACAGATAA
AGAAAGAGTTTGATAAGAATCATGGACCCACCTGGCATTGCATCGTCGGTCGTAATTTTGGATCTTATGTAACACACGAAACAAACCATTTTGTTTACTTCTACCTCGAT
CAAAAAGCAATTCTACTTTTCAAATCTGGTTGA
mRNA sequenceShow/hide mRNA sequence
GGAATAGGAGGGAGGGCGGGTAGAGAGGACGACTGGGCGACGGGAATCTTACGGAAGAGACGGCAGAGTGATAGTGGTTGAGAGCGATATCCCCTTCTTCTCTCTCACTC
CCTCTTCTCCTTCATCTCTTACCCACGTACACCAACCAATATTCTCTCCCTAAACTCCATCTAAATCATGAACCAAGATTCTCGCCGCGCCACCAATCATCCTCCACCTC
CAATTGTCAAGCTTGAATCTACAGATGATCGCAAACCCTCATCTCCCGCTCCCCTCTCCAAGAAAATCGTCATCAAGAGCGCCGATATGTTCACTGACATGCAGAAGGAG
GCTATTGACACTGCCATAGCCGCATTTGAGAAACATTCCGTTGAGAAGGATATTGCCGAACAGATAAAGAAAGAGTTTGATAAGAATCATGGACCCACCTGGCATTGCAT
CGTCGGTCGTAATTTTGGATCTTATGTAACACACGAAACAAACCATTTTGTTTACTTCTACCTCGATCAAAAAGCAATTCTACTTTTCAAATCTGGTTGAGGATTGTTGT
CCCCTTGAAAAAGATGCCACCAGCAACTACGGCAAGCTTGCGATAATGATGCTACTACAACTATTTCTTGTATGTATAATCTAGTCTGCCAGTGTATGTAAGTAAATCAC
CTGGTGTAGCATTTTCTATATTATAACTGTTATATATATATATATCACTGGGGGAGTAGATTAAATGGTGAAACAAGAAATGCGATATGCCATACACATAATGTCTCAAA
AAAGGGCCTCTTTGTCAATATCATTAAAACAAAAGGGTGCAGTAAAAGCTTCAAAAAGAAAAAGAAAATGGTGTGGTCATTGGCCAAATGGTCAATGTCGTTTGAAAATT
TGTCATTACTTCTTGATAGATGAGTTTATGGTGGTTTTTCTTTTGTGGTTCAATTTTCAAATGCTGCCTTGGAAGTTGTTTCGGTTTAAAAGAGTAAATGCAGTAGTGAA
GTAGAACAAGTACATTACAAAGATAGGGTGTAATAAAAAGGGGTGAAACAGACTGGAATTTTGAAAGAAGAAAGAATTTTTGTACTGTTGCTGAATAAAGGAAGGAGTTA
AAGGTGATGATGAGTAATCTTTAGTAGTAGAGAAATGAGATTTTTTGTGTTGATTTGATTTATTATTTCTTTATAATTTCATGCAATGGTTTGCTCTTTTACACAGCTTA
GCAGCACCTCTACCTTCAACTTTCTTAGGCAGGGGAGGAATTTTGGGGCCTTTGTTCTTGAAAATTATGGTTGAGTCATGAGTGTGTTGTAATATTAATAAAAGGATCTG
TAGTCTTGAATTTTTGTTTTATATTTTCAGTTTTGCTTAATTTGGTAAAGGCTTGTTTGTTTGCTTGTTTGACAAATGTTGTTATTCAAATAATTAACTTTGAAA
Protein sequenceShow/hide protein sequence
MNQDSRRATNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLD
QKAILLFKSG