CuGenDBv2

Gene ID	CSPI03G15200
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Tetratricopeptide repeat protein 37
Genome location	Chr3:11353428..11354624
RNA-Seq Expression	CSPI03G15200
Synteny	CSPI03G15200
Gene Ontology terms	GO:0005886 - plasma membrane (cellular component) GO:0016757 - transferase activity, transferring glycosyl groups (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0055293.1 putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY isoform X1 [Cucumis melo var. makuwa]

3.0e-73

66.02

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Query:  NNKVEYSLDSAADPDGDQH---------------------------------------VKRSGEPQKAVLAYEKAEEILLQSDVEIHRPEFLSLVQIHHA
        NNKVEYSLDSAADPDGDQH                                        +R G+PQKA++AYEKAEEILLQSDVEIHRPEFLSLVQIHHA
Subjt:  NNKVEYSLDSAADPDGDQH---------------------------------------VKRSGEPQKAVLAYEKAEEILLQSDVEIHRPEFLSLVQIHHA

Query:  QCLLLESVGDNTSNEELEQEELDEVCSKLKHSLQSDVSQAA-GNTLVLLLLTTGRVKSAISVLSSL---------------------GNMELSEKCFQEL
        QCLLLESVGDNTSNEELEQEELDEVCSKLKHS+QSDV QAA  NTL LLLLTTGRVKSAISVLSSL                     GNMELSEKCFQEL
Subjt:  QCLLLESVGDNTSNEELEQEELDEVCSKLKHSLQSDVSQAA-GNTLVLLLLTTGRVKSAISVLSSL---------------------GNMELSEKCFQEL

Query:  ILTDQNHLAALVYYAAFLLCKYGSTVASAGANAGEGGVDEKVVGVDLEFRNLVAQI
        ILTDQNH AAL+ YAAFLLCK+GSTV  AGANAGEGGVDEKVVG+++    L+A +
Subjt:  ILTDQNHLAALVYYAAFLLCKYGSTVASAGANAGEGGVDEKVVGVDLEFRNLVAQI

KGN64368.2 hypothetical protein Csa_013412 [Cucumis sativus]

1.0e-73

66.02

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Query:  NNKVEYSLDSAADPDGDQH---------------------------------------VKRSGEPQKAVLAYEKAEEILLQSDVEIHRPEFLSLVQIHHA
        NNKVEYSLDSAADPDGDQH                                        +R G+PQKAVLAYEKAEEILLQSDVEIHRPEFLSL+QIHHA
Subjt:  NNKVEYSLDSAADPDGDQH---------------------------------------VKRSGEPQKAVLAYEKAEEILLQSDVEIHRPEFLSLVQIHHA

Query:  QCLLLESVGDNTSNEELEQEELDEVCSKLKHSLQSDVSQAA-GNTLVLLLLTTGRVKSAISVLSSL---------------------GNMELSEKCFQEL
        QCLLLESVGDNTSNEELEQEELD+VCSKLKHS+QSDV QAA  NTL LLLLTTGRVKSAI+VLSSL                     GNMELSEKCFQEL
Subjt:  QCLLLESVGDNTSNEELEQEELDEVCSKLKHSLQSDVSQAA-GNTLVLLLLTTGRVKSAISVLSSL---------------------GNMELSEKCFQEL

Query:  ILTDQNHLAALVYYAAFLLCKYGSTVASAGANAGEGGVDEKVVGVDLEFRNLVAQI
        ILTDQNH AAL+ YAAFLLCKYGSTV  AGANAGEGGVDEKVVG+++    L+A +
Subjt:  ILTDQNHLAALVYYAAFLLCKYGSTVASAGANAGEGGVDEKVVGVDLEFRNLVAQI

TYJ99217.1 putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY isoform X1 [Cucumis melo var. makuwa]

3.0e-73

66.02

Show/hide

Query:  NNKVEYSLDSAADPDGDQH---------------------------------------VKRSGEPQKAVLAYEKAEEILLQSDVEIHRPEFLSLVQIHHA
        NNKVEYSLDSAADPDGDQH                                        +R G+PQKA++AYEKAEEILLQSDVEIHRPEFLSLVQIHHA
Subjt:  NNKVEYSLDSAADPDGDQH---------------------------------------VKRSGEPQKAVLAYEKAEEILLQSDVEIHRPEFLSLVQIHHA

Query:  QCLLLESVGDNTSNEELEQEELDEVCSKLKHSLQSDVSQAA-GNTLVLLLLTTGRVKSAISVLSSL---------------------GNMELSEKCFQEL
        QCLLLESVGDNTSNEELEQEELDEVCSKLKHS+QSDV QAA  NTL LLLLTTGRVKSAISVLSSL                     GNMELSEKCFQEL
Subjt:  QCLLLESVGDNTSNEELEQEELDEVCSKLKHSLQSDVSQAA-GNTLVLLLLTTGRVKSAISVLSSL---------------------GNMELSEKCFQEL

Query:  ILTDQNHLAALVYYAAFLLCKYGSTVASAGANAGEGGVDEKVVGVDLEFRNLVAQI
        ILTDQNH AAL+ YAAFLLCK+GSTV  AGANAGEGGVDEKVVG+++    L+A +
Subjt:  ILTDQNHLAALVYYAAFLLCKYGSTVASAGANAGEGGVDEKVVGVDLEFRNLVAQI

XP_008439186.1 PREDICTED: probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY isoform X1 [Cucumis melo]

3.0e-73

66.02

Show/hide

Query:  NNKVEYSLDSAADPDGDQH---------------------------------------VKRSGEPQKAVLAYEKAEEILLQSDVEIHRPEFLSLVQIHHA
        NNKVEYSLDSAADPDGDQH                                        +R G+PQKA++AYEKAEEILLQSDVEIHRPEFLSLVQIHHA
Subjt:  NNKVEYSLDSAADPDGDQH---------------------------------------VKRSGEPQKAVLAYEKAEEILLQSDVEIHRPEFLSLVQIHHA

Query:  QCLLLESVGDNTSNEELEQEELDEVCSKLKHSLQSDVSQAA-GNTLVLLLLTTGRVKSAISVLSSL---------------------GNMELSEKCFQEL
        QCLLLESVGDNTSNEELEQEELDEVCSKLKHS+QSDV QAA  NTL LLLLTTGRVKSAISVLSSL                     GNMELSEKCFQEL
Subjt:  QCLLLESVGDNTSNEELEQEELDEVCSKLKHSLQSDVSQAA-GNTLVLLLLTTGRVKSAISVLSSL---------------------GNMELSEKCFQEL

Query:  ILTDQNHLAALVYYAAFLLCKYGSTVASAGANAGEGGVDEKVVGVDLEFRNLVAQI
        ILTDQNH AAL+ YAAFLLCK+GSTV  AGANAGEGGVDEKVVG+++    L+A +
Subjt:  ILTDQNHLAALVYYAAFLLCKYGSTVASAGANAGEGGVDEKVVGVDLEFRNLVAQI

XP_031745050.1 probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY [Cucumis sativus]

1.0e-73

66.02

Show/hide

Query:  NNKVEYSLDSAADPDGDQH---------------------------------------VKRSGEPQKAVLAYEKAEEILLQSDVEIHRPEFLSLVQIHHA
        NNKVEYSLDSAADPDGDQH                                        +R G+PQKAVLAYEKAEEILLQSDVEIHRPEFLSL+QIHHA
Subjt:  NNKVEYSLDSAADPDGDQH---------------------------------------VKRSGEPQKAVLAYEKAEEILLQSDVEIHRPEFLSLVQIHHA

Query:  QCLLLESVGDNTSNEELEQEELDEVCSKLKHSLQSDVSQAA-GNTLVLLLLTTGRVKSAISVLSSL---------------------GNMELSEKCFQEL
        QCLLLESVGDNTSNEELEQEELD+VCSKLKHS+QSDV QAA  NTL LLLLTTGRVKSAI+VLSSL                     GNMELSEKCFQEL
Subjt:  QCLLLESVGDNTSNEELEQEELDEVCSKLKHSLQSDVSQAA-GNTLVLLLLTTGRVKSAISVLSSL---------------------GNMELSEKCFQEL

Query:  ILTDQNHLAALVYYAAFLLCKYGSTVASAGANAGEGGVDEKVVGVDLEFRNLVAQI
        ILTDQNH AAL+ YAAFLLCKYGSTV  AGANAGEGGVDEKVVG+++    L+A +
Subjt:  ILTDQNHLAALVYYAAFLLCKYGSTVASAGANAGEGGVDEKVVGVDLEFRNLVAQI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L976 Uncharacterized protein

1.0e-127

83.12

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Query:  MEHPKAPLMTIRRRSILLKSFLLTSMLILQKWMMTLPFTFQLRLSPGYLWIRAIMTKLWKFARILMQWKLKVDINNKVEYSLDSAADPDGDQ--------
        MEHPKAPLMTIRRRSILLKSFLLTSMLILQKWMMTLPFTFQLRLSPGYLWIRAIMTKLWKFARILMQWKLKVDINNKVEYSLDSAADPDGDQ        
Subjt:  MEHPKAPLMTIRRRSILLKSFLLTSMLILQKWMMTLPFTFQLRLSPGYLWIRAIMTKLWKFARILMQWKLKVDINNKVEYSLDSAADPDGDQ--------

Query:  -------------------------------HVKRSGEPQKAVLAYEKAEEILLQSDVEIHRPEFLSLVQIHHAQCLLLESVGDNTSNEELEQEELDEVC
                                         +RSGEPQKAVLAYEKAEEILLQSDVEIHRPEFLSLVQIHHAQCLLLESVGDNTSNEELEQEELDEVC
Subjt:  -------------------------------HVKRSGEPQKAVLAYEKAEEILLQSDVEIHRPEFLSLVQIHHAQCLLLESVGDNTSNEELEQEELDEVC

Query:  SKLKHSLQSDVSQAAGNTLVLLLLTTGRVKSAISVLSSLGNMELSEKCFQELILTDQNHLAALVYYAAFLLCKYGSTVASAGANAGEGGVDEKVVGVDLE
        SKLKHSLQSDVSQAAGNTLVLLLLTTGRVKSAISVLSSLGNMELSEKCFQELILTDQNHLAALVYYAAFLLCKYGSTVASAGANAGEGGVDEKVVG+++ 
Subjt:  SKLKHSLQSDVSQAAGNTLVLLLLTTGRVKSAISVLSSLGNMELSEKCFQELILTDQNHLAALVYYAAFLLCKYGSTVASAGANAGEGGVDEKVVGVDLE

Query:  FRNLVAQI
           L+A +
Subjt:  FRNLVAQI

A0A0A0LTP6 Uncharacterized protein

2.7e-75

67.58

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Query:  NNKVEYSLDSAADPDGDQ---------------------HV------------------KRSGEPQKAVLAYEKAEEILLQSDVEIHRPEFLSLVQIHHA
        NNKVEYSLDSAADPDGDQ                     HV                  +R G+PQKAVLAYEKAEEILLQSDVEIHRPEFLSL+QIHHA
Subjt:  NNKVEYSLDSAADPDGDQ---------------------HV------------------KRSGEPQKAVLAYEKAEEILLQSDVEIHRPEFLSLVQIHHA

Query:  QCLLLESVGDNTSNEELEQEELDEVCSKLKHSLQSDVSQAA-GNTLVLLLLTTGRVKSAISVLSSL---------------------GNMELSEKCFQEL
        QCLLLESVGDNTSNEELEQEELD+VCSKLKHS+QSDV QAA  NTL LLLLTTGRVKSAI+VLSSL                     GNMELSEKCFQEL
Subjt:  QCLLLESVGDNTSNEELEQEELDEVCSKLKHSLQSDVSQAA-GNTLVLLLLTTGRVKSAISVLSSL---------------------GNMELSEKCFQEL

Query:  ILTDQNHLAALVYYAAFLLCKYGSTVASAGANAGEGGVDEKVVGVDLEFRNLVAQI
        ILTDQNHLAALVYYAAFLLCKYGSTV  AGANAGEGGVDEKVVG+++    L+A +
Subjt:  ILTDQNHLAALVYYAAFLLCKYGSTVASAGANAGEGGVDEKVVGVDLEFRNLVAQI

A0A1S3AYU1 probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY isoform X1

1.5e-73

66.02

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Query:  NNKVEYSLDSAADPDGDQH---------------------------------------VKRSGEPQKAVLAYEKAEEILLQSDVEIHRPEFLSLVQIHHA
        NNKVEYSLDSAADPDGDQH                                        +R G+PQKA++AYEKAEEILLQSDVEIHRPEFLSLVQIHHA
Subjt:  NNKVEYSLDSAADPDGDQH---------------------------------------VKRSGEPQKAVLAYEKAEEILLQSDVEIHRPEFLSLVQIHHA

Query:  QCLLLESVGDNTSNEELEQEELDEVCSKLKHSLQSDVSQAA-GNTLVLLLLTTGRVKSAISVLSSL---------------------GNMELSEKCFQEL
        QCLLLESVGDNTSNEELEQEELDEVCSKLKHS+QSDV QAA  NTL LLLLTTGRVKSAISVLSSL                     GNMELSEKCFQEL
Subjt:  QCLLLESVGDNTSNEELEQEELDEVCSKLKHSLQSDVSQAA-GNTLVLLLLTTGRVKSAISVLSSL---------------------GNMELSEKCFQEL

Query:  ILTDQNHLAALVYYAAFLLCKYGSTVASAGANAGEGGVDEKVVGVDLEFRNLVAQI
        ILTDQNH AAL+ YAAFLLCK+GSTV  AGANAGEGGVDEKVVG+++    L+A +
Subjt:  ILTDQNHLAALVYYAAFLLCKYGSTVASAGANAGEGGVDEKVVGVDLEFRNLVAQI

A0A5A7UH60 Putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY isoform X1

1.5e-73

66.02

Show/hide

Query:  NNKVEYSLDSAADPDGDQH---------------------------------------VKRSGEPQKAVLAYEKAEEILLQSDVEIHRPEFLSLVQIHHA
        NNKVEYSLDSAADPDGDQH                                        +R G+PQKA++AYEKAEEILLQSDVEIHRPEFLSLVQIHHA
Subjt:  NNKVEYSLDSAADPDGDQH---------------------------------------VKRSGEPQKAVLAYEKAEEILLQSDVEIHRPEFLSLVQIHHA

Query:  QCLLLESVGDNTSNEELEQEELDEVCSKLKHSLQSDVSQAA-GNTLVLLLLTTGRVKSAISVLSSL---------------------GNMELSEKCFQEL
        QCLLLESVGDNTSNEELEQEELDEVCSKLKHS+QSDV QAA  NTL LLLLTTGRVKSAISVLSSL                     GNMELSEKCFQEL
Subjt:  QCLLLESVGDNTSNEELEQEELDEVCSKLKHSLQSDVSQAA-GNTLVLLLLTTGRVKSAISVLSSL---------------------GNMELSEKCFQEL

Query:  ILTDQNHLAALVYYAAFLLCKYGSTVASAGANAGEGGVDEKVVGVDLEFRNLVAQI
        ILTDQNH AAL+ YAAFLLCK+GSTV  AGANAGEGGVDEKVVG+++    L+A +
Subjt:  ILTDQNHLAALVYYAAFLLCKYGSTVASAGANAGEGGVDEKVVGVDLEFRNLVAQI

A0A5D3BJC5 Putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY isoform X1

1.5e-73

66.02

Show/hide

Query:  NNKVEYSLDSAADPDGDQH---------------------------------------VKRSGEPQKAVLAYEKAEEILLQSDVEIHRPEFLSLVQIHHA
        NNKVEYSLDSAADPDGDQH                                        +R G+PQKA++AYEKAEEILLQSDVEIHRPEFLSLVQIHHA
Subjt:  NNKVEYSLDSAADPDGDQH---------------------------------------VKRSGEPQKAVLAYEKAEEILLQSDVEIHRPEFLSLVQIHHA

Query:  QCLLLESVGDNTSNEELEQEELDEVCSKLKHSLQSDVSQAA-GNTLVLLLLTTGRVKSAISVLSSL---------------------GNMELSEKCFQEL
        QCLLLESVGDNTSNEELEQEELDEVCSKLKHS+QSDV QAA  NTL LLLLTTGRVKSAISVLSSL                     GNMELSEKCFQEL
Subjt:  QCLLLESVGDNTSNEELEQEELDEVCSKLKHSLQSDVSQAA-GNTLVLLLLTTGRVKSAISVLSSL---------------------GNMELSEKCFQEL

Query:  ILTDQNHLAALVYYAAFLLCKYGSTVASAGANAGEGGVDEKVVGVDLEFRNLVAQI
        ILTDQNH AAL+ YAAFLLCK+GSTV  AGANAGEGGVDEKVVG+++    L+A +
Subjt:  ILTDQNHLAALVYYAAFLLCKYGSTVASAGANAGEGGVDEKVVGVDLEFRNLVAQI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G63200.1 tetratricopeptide repeat (TPR)-containing protein

1.6e-40

51.78

Show/hide

Query:  KRSGEPQKAVLAYEKAEEILLQSDVEIHRPEFLSLVQIHHAQCLLLESVGDNTSNEELEQEELDEVCSKLKHSLQSDVSQAA-GNTLVLLLLTTGRVKSA
        +R G+ QKA+  YEKAEEILL  + EI RPE L LVQIHH QCLLL+  GD  S +ELE EEL+E+ SKLK S++ DV QAA  NTL L+LL  G + SA
Subjt:  KRSGEPQKAVLAYEKAEEILLQSDVEIHRPEFLSLVQIHHAQCLLLESVGDNTSNEELEQEELDEVCSKLKHSLQSDVSQAA-GNTLVLLLLTTGRVKSA

Query:  ISVLSSL---------------------GNMELSEKCFQELILTDQNHLAALVYYAAFLLCKYGSTVASAGANAGEGGVDEKVVGVDLEFRNLVAQI
        ISVLSSL                     G+MELS KCFQ+L+L D NH AAL+ YAA LLCK+ STVA AGAN G    +++   +++    L+A +
Subjt:  ISVLSSL---------------------GNMELSEKCFQELILTDQNHLAALVYYAAFLLCKYGSTVASAGANAGEGGVDEKVVGVDLEFRNLVAQI

Sequences

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CDS sequence

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ATGGAGCACCCGAAAGCTCCCTTGATGACCATTCGAAGGCGGTCTATTCTTCTAAAGTCGTTCTTGCTGACCTCAATGTTGATCCTCCAGAAATGGATGATGACACTTCC
GTTCACGTTTCAGCTTCGACTATCTCCAGGTTATCTGTGGATTAGAGCAATCATGACAAAACTGTGGAAATTTGCACGGATACTAATGCAATGGAAGTTGAAGGTAGACA
TAAATAATAAGGTAGAGTACTCTCTTGATTCTGCAGCTGATCCAGATGGTGATCAACATGTCAAGAGGTCGGGCGAGCCACAGAAGGCTGTTTTAGCATATGAGAAGGCA
GAGGAGATCCTACTCCAAAGTGATGTTGAGATTCACAGACCAGAGTTTCTCTCACTGGTCCAAATTCATCATGCACAGTGTCTCCTTCTAGAAAGTGTAGGGGATAATAC
TTCAAATGAAGAACTTGAACAGGAGGAGCTTGATGAGGTTTGTTCTAAACTTAAGCATTCATTGCAATCTGATGTAAGCCAGGCAGCTGGGAATACCCTAGTCTTGTTAC
TTCTTACAACTGGTCGAGTGAAGAGTGCTATTTCAGTATTGTCGTCCCTTGGTAATATGGAACTATCAGAAAAATGTTTTCAAGAATTGATCCTGACAGATCAAAATCAC
CTTGCTGCTCTCGTCTACTATGCTGCTTTTCTCTTGTGCAAGTATGGTTCTACTGTTGCAAGTGCTGGAGCAAATGCTGGTGAAGGTGGTGTTGATGAGAAGGTTGTAGG
TGTTGATTTAGAATTCAGAAACCTTGTTGCACAGATAGCTTATCCTTGTTCCATTTAA

mRNA sequence

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Protein sequence

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MEHPKAPLMTIRRRSILLKSFLLTSMLILQKWMMTLPFTFQLRLSPGYLWIRAIMTKLWKFARILMQWKLKVDINNKVEYSLDSAADPDGDQHVKRSGEPQKAVLAYEKA
EEILLQSDVEIHRPEFLSLVQIHHAQCLLLESVGDNTSNEELEQEELDEVCSKLKHSLQSDVSQAAGNTLVLLLLTTGRVKSAISVLSSLGNMELSEKCFQELILTDQNH
LAALVYYAAFLLCKYGSTVASAGANAGEGGVDEKVVGVDLEFRNLVAQIAYPCSI

CSPI03G15200 (gene) of Cucumber (PI 183967) v1 genome