| GenBank top hits | e value | %identity | Alignment |
|---|
| TYK11204.1 reverse transcriptase [Cucumis melo var. makuwa] | 2.3e-105 | 56.15 | Show/hide |
Query: MDNLDSLNRRIDGLPAQARIE---DYDRHGGNKGGRRARRNFRHLPNPRNDQRRRQMDAPPRYADDDDQEDYDEWQNAQDHESSSGDERRNIWNGHEECR
MD L++L RR+DGLPA ARIE + DR+ GN+GGRRARRNFR+LPN RNDQR+R M+ P RYAD+D E+Y+ WQN Q+ +SSS DE+ NIWN + + +
Subjt: MDNLDSLNRRIDGLPAQARIE---DYDRHGGNKGGRRARRNFRHLPNPRNDQRRRQMDAPPRYADDDDQEDYDEWQNAQDHESSSGDERRNIWNGHEECR
Query: MPQGYRVQEARRETYHDYKMKIDLPTYNGKRDIESFLDWIKNTENFFNYMDTPERKK-----------------------------------KMKKLLKT
M Q YR EA+RE +HDYKMKIDLPTY GK D+ESFLDWI+NTENFFNYMDT +RKK KMKKL+K
Subjt: MPQGYRVQEARRETYHDYKMKIDLPTYNGKRDIESFLDWIKNTENFFNYMDTPERKK-----------------------------------KMKKLLKT
Query: RFLPPNYEQTLYNQYQNCRQGSRIVAEYIEEFHRLSARTNLSENEQHQIARFIGGLRFDIKEKVKLQPFRFLSEAISLAETVEEMITARLKNSNRKITWE
RFLPPNYEQTLYNQYQNCRQGS+ VAEYI+EFH+LSARTNL +TVEEM+ ARL+N+NRK TWE
Subjt: RFLPPNYEQTLYNQYQNCRQGSRIVAEYIEEFHRLSARTNLSENEQHQIARFIGGLRFDIKEKVKLQPFRFLSEAISLAETVEEMITARLKNSNRKITWE
Query: TNSTKKQPYNRRTEEQPATSVAEKGKEFDTQEASKKKEGAGRGKSLNNYTRPSLGKCFRCGEPGHLSNNCPQRKTIALAEDEGSDMSKED
T+ +KKQ Y+ +T EQP+TSVAEK K+ + QEA+KKKE AG+GK NNY RPSLGKCFRC + +LSN CPQRKTIALAE+E D +++D
Subjt: TNSTKKQPYNRRTEEQPATSVAEKGKEFDTQEASKKKEGAGRGKSLNNYTRPSLGKCFRCGEPGHLSNNCPQRKTIALAEDEGSDMSKED
|
|
| TYK30863.1 transposon Ty3-I Gag-Pol polyprotein isoform X1 [Cucumis melo var. makuwa] | 1.1e-123 | 70.55 | Show/hide |
Query: ARIEDYDRHGGNKGGRRARRNFRHLPNPRNDQRRRQMDAPPRYADDDDQEDYDEWQNAQDHESSSGDERRNIWNGHEECRMPQGYRVQEARRETYHDYKM
ARIE Y R+ N+GGRRARRN+++ PN QRRR D P +YADD+ QE+Y+ WQN QDH+SS GDE+ NIWN E RM QGYR QEARRETYHDYKM
Subjt: ARIEDYDRHGGNKGGRRARRNFRHLPNPRNDQRRRQMDAPPRYADDDDQEDYDEWQNAQDHESSSGDERRNIWNGHEECRMPQGYRVQEARRETYHDYKM
Query: KIDLPTYNGKRDIESFLDWIKNTENFFNYMDTPERKKKMKKLLKTR----FLPPNYEQTL---YNQYQNCRQGSRIVAEYIEEFHRLSARTNLSENEQHQ
KIDLPTYNGKRDIESFLDWIKNTENFF YM P+RKK LK + P +Y Q + Y+QYQNCRQGS++VAEYIEEFHRL AR NLSENEQHQ
Subjt: KIDLPTYNGKRDIESFLDWIKNTENFFNYMDTPERKKKMKKLLKTR----FLPPNYEQTL---YNQYQNCRQGSRIVAEYIEEFHRLSARTNLSENEQHQ
Query: IARFIGGLRFDIKEKVKLQPFRFLSEAISLAETVEEMITARLKNSNRKITWETNSTKKQPYNRRTEEQPATSVAEKGKEFDTQEASKKKEGAGRGKSLNN
IARFIGGLRFDIKEKVKL FR LSEAISLAETVEEM+T RLKNSNR+ WETN +KKQ Y ++T+EQP+TS+ +KGK D QE +KKKE RGK+ NN
Subjt: IARFIGGLRFDIKEKVKLQPFRFLSEAISLAETVEEMITARLKNSNRKITWETNSTKKQPYNRRTEEQPATSVAEKGKEFDTQEASKKKEGAGRGKSLNN
Query: YTRPSLGKCFRCGEPGHLSNNCPQRKTIALAEDEGSDMSKEDK
YTRPSLGKCFRCGEPGHLSNNC QRKTIALAEDE + MS D+
Subjt: YTRPSLGKCFRCGEPGHLSNNCPQRKTIALAEDEGSDMSKEDK
|
|
| XP_031741035.1 uncharacterized protein LOC116403692 [Cucumis sativus] | 9.2e-107 | 58.57 | Show/hide |
Query: MDNLDSLNRRIDGLPAQARIE---DYDRHGGNKGGRRARRNFRHLPNPRNDQRRRQMDAPPRYADDDDQEDYDEWQNAQDHESSSGDERRNIWNGHEECR
M++++ LNRR + R E D+ G GRRAR R++ NPR QRRR A + D+D QED + WQ Q+ +SSSGDE+ N+WN ++E R
Subjt: MDNLDSLNRRIDGLPAQARIE---DYDRHGGNKGGRRARRNFRHLPNPRNDQRRRQMDAPPRYADDDDQEDYDEWQNAQDHESSSGDERRNIWNGHEECR
Query: MPQGYRVQEARRETYHDYKMKIDLPTYNGKRDIESFLDWIKNTENFFNYMDTPERKK-----------------------------------KMKKLLKT
+ + EARR YHDYKMKIDLP Y+GKR+IE+FLDWIK+TENFFNYMDTPERKK KMKKLLK
Subjt: MPQGYRVQEARRETYHDYKMKIDLPTYNGKRDIESFLDWIKNTENFFNYMDTPERKK-----------------------------------KMKKLLKT
Query: RFLPPNYEQTLYNQYQNCRQGSRIVAEYIEEFHRLSARTNLSENEQHQIARFIGGLRFDIKEKVKLQPFRFLSEAISLAETVEEMITARLKNSNRKITWE
RFLPPNYEQTLYNQYQNCRQG R VAEYIEEFHRLSARTNLSENEQHQ+ARF+GGLRFDIKEKV+LQPFRFLSEAIS AETVEEMI R KN NR+ WE
Subjt: RFLPPNYEQTLYNQYQNCRQGSRIVAEYIEEFHRLSARTNLSENEQHQIARFIGGLRFDIKEKVKLQPFRFLSEAISLAETVEEMITARLKNSNRKITWE
Query: TNSTKKQPYNRRTEEQPATSVAEKGKEFDTQEAS--KKKEGAGRGKSLNNYTRPSLGKCFRCGEPGHLSNNCPQRKTIALAEDEGSDMSKE
TNSTK +T +QP+TS KGKE D QE + +KKE + N+Y+RPSLGKCFRCG+ GHLS+NCPQRKTIA+AE EG +S++
Subjt: TNSTKKQPYNRRTEEQPATSVAEKGKEFDTQEAS--KKKEGAGRGKSLNNYTRPSLGKCFRCGEPGHLSNNCPQRKTIALAEDEGSDMSKE
|
|
| XP_031743026.1 uncharacterized protein LOC116404533 [Cucumis sativus] | 1.1e-107 | 58.63 | Show/hide |
Query: MDNLDSLNRRIDGLPAQARIE---DYDRHGGNKGGRRARRNFRHLPNPRNDQRRRQMDAPPRYADDDDQEDYDEWQNAQDHESSSGDERRNIWNGHEECR
M++++ LNRR + R E D+ G GRRAR R++ NPR QRRR A + D+D QED ++WQ Q+ +SSSGDE+ N+WN ++E R
Subjt: MDNLDSLNRRIDGLPAQARIE---DYDRHGGNKGGRRARRNFRHLPNPRNDQRRRQMDAPPRYADDDDQEDYDEWQNAQDHESSSGDERRNIWNGHEECR
Query: MPQGYRVQEARRETYHDYKMKIDLPTYNGKRDIESFLDWIKNTENFFNYMDTPERKK-----------------------------------KMKKLLKT
+ R EARR YHDYKMKIDLP Y GKR+IE+FLDWIK+TENFF YMDTPERKK KMKKLLK
Subjt: MPQGYRVQEARRETYHDYKMKIDLPTYNGKRDIESFLDWIKNTENFFNYMDTPERKK-----------------------------------KMKKLLKT
Query: RFLPPNYEQTLYNQYQNCRQGSRIVAEYIEEFHRLSARTNLSENEQHQIARFIGGLRFDIKEKVKLQPFRFLSEAISLAETVEEMITARLKNSNRKITWE
RFLPPNYEQTLYNQYQNCRQG R VAEYIEEFHRLSARTNLSENEQHQ+ARF+GGLRFDIKEKV+LQPFRFLSEAIS AETVEEMI R KN NR+ WE
Subjt: RFLPPNYEQTLYNQYQNCRQGSRIVAEYIEEFHRLSARTNLSENEQHQIARFIGGLRFDIKEKVKLQPFRFLSEAISLAETVEEMITARLKNSNRKITWE
Query: TNSTKKQPYNRRTEEQPATSVAEKGKEFDTQEAS--KKKEGAGRGKSLNNYTRPSLGKCFRCGEPGHLSNNCPQRKTIALAEDEGSDMSKEDKV
TNSTK +T +QP+TS KGKE D QE + +KKE + NNY+RPSLGKCFRCG+ GHLSNNCPQRKTIA+AE+ G + ED +
Subjt: TNSTKKQPYNRRTEEQPATSVAEKGKEFDTQEAS--KKKEGAGRGKSLNNYTRPSLGKCFRCGEPGHLSNNCPQRKTIALAEDEGSDMSKEDKV
|
|
| XP_031745523.1 uncharacterized protein LOC116405899 [Cucumis sativus] | 6.6e-89 | 66.29 | Show/hide |
Query: MKIDLPTYNGKRDIESFLDWIKNTENFFNYMDTPERKK-----------------------------------KMKKLLKTRFLPPNYEQTLYNQYQNCR
MK+DLP+Y+GKRDIESFLDW+K+TENFF+YMDTPE+KK KMKKLLK RFLPPNYEQTLYNQYQNCR
Subjt: MKIDLPTYNGKRDIESFLDWIKNTENFFNYMDTPERKK-----------------------------------KMKKLLKTRFLPPNYEQTLYNQYQNCR
Query: QGSRIVAEYIEEFHRLSARTNLSENEQHQIARFIGGLRFDIKEKVKLQPFRFLSEAISLAETVEEMITARLKNSNRKITWETNSTKKQPYNRRTEEQPAT
QG+R V EYIEEFHRLSARTNLSENEQHQIARF+GGLRFDIKEKVKLQP RFLSEAISLAETVEEMI + K NR+ TWE TKK Y +T +QP
Subjt: QGSRIVAEYIEEFHRLSARTNLSENEQHQIARFIGGLRFDIKEKVKLQPFRFLSEAISLAETVEEMITARLKNSNRKITWETNSTKKQPYNRRTEEQPAT
Query: SVAEKGKEFDTQEAS--KKKEGAGRGKSLNNYTRPSLGKCFRCGEPGHLSNNCPQRKTIALAEDEGS
+ KGKE D+Q A+ KK E + K+ NNYTRPSLGKCFRCG+PGHLSN+CPQRKTIALAE+EG+
Subjt: SVAEKGKEFDTQEAS--KKKEGAGRGKSLNNYTRPSLGKCFRCGEPGHLSNNCPQRKTIALAEDEGS
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T256 Reverse transcriptase | 1.1e-70 | 77.78 | Show/hide |
Query: YNQYQNCRQGSRIVAEYIEEFHRLSARTNLSENEQHQIARFIGGLRFDIKEKVKLQPFRFLSEAISLAETVEEMITARLKNSNRKITWETNSTKKQPYNR
Y+QYQNCRQGS+ VAEYIEEFHRLSAR NLSENEQHQIARFIGGLRFDIKEKVKL FR LSEAISLAETVEEM+T RLKNSNR+ WETN +KKQ Y +
Subjt: YNQYQNCRQGSRIVAEYIEEFHRLSARTNLSENEQHQIARFIGGLRFDIKEKVKLQPFRFLSEAISLAETVEEMITARLKNSNRKITWETNSTKKQPYNR
Query: RTEEQPATSVAEKGKEFDTQEASKKKEGAGRGKSLNNYTRPSLGKCFRCGEPGHLSNNCPQRKTIALAEDEGSDMSKEDK
+T+EQP+TS+ +KGK D QE +KKKE RGK+ NNYTRPSLGKCFRCGEPGHLSNNC QRKTIALAEDE + MS D+
Subjt: RTEEQPATSVAEKGKEFDTQEASKKKEGAGRGKSLNNYTRPSLGKCFRCGEPGHLSNNCPQRKTIALAEDEGSDMSKEDK
|
|
| A0A5A7UXS4 CCHC-type domain-containing protein | 5.3e-76 | 58.09 | Show/hide |
Query: MKIDLPTYNGKRDIESFLDWIKNTENFFNYMDTPERKK-----------------------------------KMKKLLKTRFLPPNYEQTLYNQYQNCR
MKIDLP YNGKRD ESFLDW+K+T+NFFNYMDT +RKK KMKKLLK RFLPPNYEQT+YNQYQNC
Subjt: MKIDLPTYNGKRDIESFLDWIKNTENFFNYMDTPERKK-----------------------------------KMKKLLKTRFLPPNYEQTLYNQYQNCR
Query: QGSRIVAEYIEEFHRLSARTNLSENEQHQIARFIGGLRFDIKEKVKLQPFRFLSEAISLAETVEEMITARLKNSNRKITWETNSTKKQPYNRRTEEQPAT
QGSR +AEYIEEFHRLSARTNL ENEQHQIARFIG ETVEEM+ A LK+SNRK TW+ N +KKQ Y+ RT EQP+T
Subjt: QGSRIVAEYIEEFHRLSARTNLSENEQHQIARFIGGLRFDIKEKVKLQPFRFLSEAISLAETVEEMITARLKNSNRKITWETNSTKKQPYNRRTEEQPAT
Query: SVAEKGKEFDTQEASKKKEGAGRGKSLNNYTRPSLGKCFRCGEPGHLSNNCPQRKTIALAEDEGSDMSKEDK
SV K K+ DTQ+A+KKK+ +GKS N YTRPSL KCFRCG+ GHLSNNCPQR+TI+LA+ E + +S++DK
Subjt: SVAEKGKEFDTQEASKKKEGAGRGKSLNNYTRPSLGKCFRCGEPGHLSNNCPQRKTIALAEDEGSDMSKEDK
|
|
| A0A5D3CJ99 Reverse transcriptase | 1.1e-105 | 56.15 | Show/hide |
Query: MDNLDSLNRRIDGLPAQARIE---DYDRHGGNKGGRRARRNFRHLPNPRNDQRRRQMDAPPRYADDDDQEDYDEWQNAQDHESSSGDERRNIWNGHEECR
MD L++L RR+DGLPA ARIE + DR+ GN+GGRRARRNFR+LPN RNDQR+R M+ P RYAD+D E+Y+ WQN Q+ +SSS DE+ NIWN + + +
Subjt: MDNLDSLNRRIDGLPAQARIE---DYDRHGGNKGGRRARRNFRHLPNPRNDQRRRQMDAPPRYADDDDQEDYDEWQNAQDHESSSGDERRNIWNGHEECR
Query: MPQGYRVQEARRETYHDYKMKIDLPTYNGKRDIESFLDWIKNTENFFNYMDTPERKK-----------------------------------KMKKLLKT
M Q YR EA+RE +HDYKMKIDLPTY GK D+ESFLDWI+NTENFFNYMDT +RKK KMKKL+K
Subjt: MPQGYRVQEARRETYHDYKMKIDLPTYNGKRDIESFLDWIKNTENFFNYMDTPERKK-----------------------------------KMKKLLKT
Query: RFLPPNYEQTLYNQYQNCRQGSRIVAEYIEEFHRLSARTNLSENEQHQIARFIGGLRFDIKEKVKLQPFRFLSEAISLAETVEEMITARLKNSNRKITWE
RFLPPNYEQTLYNQYQNCRQGS+ VAEYI+EFH+LSARTNL +TVEEM+ ARL+N+NRK TWE
Subjt: RFLPPNYEQTLYNQYQNCRQGSRIVAEYIEEFHRLSARTNLSENEQHQIARFIGGLRFDIKEKVKLQPFRFLSEAISLAETVEEMITARLKNSNRKITWE
Query: TNSTKKQPYNRRTEEQPATSVAEKGKEFDTQEASKKKEGAGRGKSLNNYTRPSLGKCFRCGEPGHLSNNCPQRKTIALAEDEGSDMSKED
T+ +KKQ Y+ +T EQP+TSVAEK K+ + QEA+KKKE AG+GK NNY RPSLGKCFRC + +LSN CPQRKTIALAE+E D +++D
Subjt: TNSTKKQPYNRRTEEQPATSVAEKGKEFDTQEASKKKEGAGRGKSLNNYTRPSLGKCFRCGEPGHLSNNCPQRKTIALAEDEGSDMSKED
|
|
| A0A5D3DGR0 Reverse transcriptase | 1.1e-62 | 44.53 | Show/hide |
Query: LDSLNRRIDGLPAQARIEDYDRHGGNKGGRRARRNFRHLPNPRNDQRRRQMDAPPRYADDDDQEDYDEWQNAQDHESSSGDERRNIWNGHEECRMPQGYR
L+ + R+D AQ D + GRR RR + RN Q R + ++ EWQ ++ +S + + E R + +
Subjt: LDSLNRRIDGLPAQARIEDYDRHGGNKGGRRARRNFRHLPNPRNDQRRRQMDAPPRYADDDDQEDYDEWQNAQDHESSSGDERRNIWNGHEECRMPQGYR
Query: VQEARRETYHDYKMKIDLPTYNGKRDIESFLDWIKNTENFFNYMDTPERKK-----------------------------------KMKKLLKTRFLPPN
+ +RE +YKMKIDLP+Y+GKR+IE+FLDW+KNTENFF YM T + KK KMKKL+K RF+PPN
Subjt: VQEARRETYHDYKMKIDLPTYNGKRDIESFLDWIKNTENFFNYMDTPERKK-----------------------------------KMKKLLKTRFLPPN
Query: YEQTLYNQYQNCRQGSRIVAEYIEEFHRLSARTNLSENEQHQIARFIGGLRFDIKEKVKLQPFRFLSEAISLAETVEEMITARLKNSNRKITWETNSTKK
YEQTLY QYQNCRQG R AEYIEEFHRL RTNL E E+H I+ F+GGLRFD+KEKVKLQPF+ LSEAI+ AETVEEMI R K S RK WE +++KK
Subjt: YEQTLYNQYQNCRQGSRIVAEYIEEFHRLSARTNLSENEQHQIARFIGGLRFDIKEKVKLQPFRFLSEAISLAETVEEMITARLKNSNRKITWETNSTKK
Query: QPYNRRTEEQPATSVAEKGKEFDTQEASKKKE-GAGRGKSLNNYTRPSLGKCFRCGEPGHLSNNCPQRKTIALAE--DEGSDMS
T A K + +E+S KKE G K N Y RP G C+RCG+ GH SN CPQRKTIA+A+ D+GS+ S
Subjt: QPYNRRTEEQPATSVAEKGKEFDTQEASKKKE-GAGRGKSLNNYTRPSLGKCFRCGEPGHLSNNCPQRKTIALAE--DEGSDMS
|
|
| A0A5D3E417 Transposon Ty3-I Gag-Pol polyprotein isoform X1 | 5.2e-124 | 70.55 | Show/hide |
Query: ARIEDYDRHGGNKGGRRARRNFRHLPNPRNDQRRRQMDAPPRYADDDDQEDYDEWQNAQDHESSSGDERRNIWNGHEECRMPQGYRVQEARRETYHDYKM
ARIE Y R+ N+GGRRARRN+++ PN QRRR D P +YADD+ QE+Y+ WQN QDH+SS GDE+ NIWN E RM QGYR QEARRETYHDYKM
Subjt: ARIEDYDRHGGNKGGRRARRNFRHLPNPRNDQRRRQMDAPPRYADDDDQEDYDEWQNAQDHESSSGDERRNIWNGHEECRMPQGYRVQEARRETYHDYKM
Query: KIDLPTYNGKRDIESFLDWIKNTENFFNYMDTPERKKKMKKLLKTR----FLPPNYEQTL---YNQYQNCRQGSRIVAEYIEEFHRLSARTNLSENEQHQ
KIDLPTYNGKRDIESFLDWIKNTENFF YM P+RKK LK + P +Y Q + Y+QYQNCRQGS++VAEYIEEFHRL AR NLSENEQHQ
Subjt: KIDLPTYNGKRDIESFLDWIKNTENFFNYMDTPERKKKMKKLLKTR----FLPPNYEQTL---YNQYQNCRQGSRIVAEYIEEFHRLSARTNLSENEQHQ
Query: IARFIGGLRFDIKEKVKLQPFRFLSEAISLAETVEEMITARLKNSNRKITWETNSTKKQPYNRRTEEQPATSVAEKGKEFDTQEASKKKEGAGRGKSLNN
IARFIGGLRFDIKEKVKL FR LSEAISLAETVEEM+T RLKNSNR+ WETN +KKQ Y ++T+EQP+TS+ +KGK D QE +KKKE RGK+ NN
Subjt: IARFIGGLRFDIKEKVKLQPFRFLSEAISLAETVEEMITARLKNSNRKITWETNSTKKQPYNRRTEEQPATSVAEKGKEFDTQEASKKKEGAGRGKSLNN
Query: YTRPSLGKCFRCGEPGHLSNNCPQRKTIALAEDEGSDMSKEDK
YTRPSLGKCFRCGEPGHLSNNC QRKTIALAEDE + MS D+
Subjt: YTRPSLGKCFRCGEPGHLSNNCPQRKTIALAEDEGSDMSKEDK
|
|
