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CSPI03G15260 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G15260
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionComplex1_LYR domain-containing protein
Genome locationChr3:11416853..11419042
RNA-Seq ExpressionCSPI03G15260
SyntenyCSPI03G15260
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147626.1 uncharacterized protein LOC101203751 [Cucumis sativus]1.9e-43100Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKFLGHRQHNTELIVDMVRQQFKKNMHETDPEKIQKMKDDAARGLINHMLYEHERMSGKKFSQSS
        MPSLQTALPPELANNVIRLYRECLRRAKFLGHRQHNTELIVDMVRQQFKKNMHETDPEKIQKMKDDAARGLINHMLYEHERMSGKKFSQSS
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKFLGHRQHNTELIVDMVRQQFKKNMHETDPEKIQKMKDDAARGLINHMLYEHERMSGKKFSQSS
XP_008438986.1 PREDICTED: uncharacterized protein LOC103483919 [Cucumis melo]1.7e-4195.6Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKFLGHRQHNTELIVDMVRQQFKKNMHETDPEKIQKMKDDAARGLINHMLYEHERMSGKKFSQSS
        MPSLQTALPPELANNVIRLYRECLRRAKF+GHRQHNTELIVDMVRQQFKKNMHETDPEKIQKMKD+AARGLINHMLYEHERMSG+K SQSS
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKFLGHRQHNTELIVDMVRQQFKKNMHETDPEKIQKMKDDAARGLINHMLYEHERMSGKKFSQSS
XP_010270901.1 PREDICTED: uncharacterized protein LOC104607091 isoform X2 [Nelumbo nucifera]4.7e-3989.01Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKFLGHRQHNTELIVDMVRQQFKKNMHETDPEKIQKMKDDAARGLINHMLYEHERMSGKKFSQSS
        MPSLQTALPPELANNVIRLYRECLRRA+F+GHRQHNTEL+VDMVRQQFKK+MHETDPEKIQK+KDDAARGLINH+LYE E+MSG+KFS SS
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKFLGHRQHNTELIVDMVRQQFKKNMHETDPEKIQKMKDDAARGLINHMLYEHERMSGKKFSQSS
XP_030973563.1 uncharacterized protein LOC115993736 [Quercus lobata]6.2e-3989.01Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKFLGHRQHNTELIVDMVRQQFKKNMHETDPEKIQKMKDDAARGLINHMLYEHERMSGKKFSQSS
        MPSLQTALPPELANNVIRLYRECLRRAK++GHRQHNTELIVDMVRQQFKK+MHETDPEKIQK+KDDAARGLINH+LYE E+MSG+KFS+S+
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKFLGHRQHNTELIVDMVRQQFKKNMHETDPEKIQKMKDDAARGLINHMLYEHERMSGKKFSQSS
XP_031490696.1 uncharacterized protein LOC116257839 isoform X2 [Nymphaea colorata]6.2e-3990Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKFLGHRQHNTELIVDMVRQQFKKNMHETDPEKIQKMKDDAARGLINHMLYEHERMSGKKFSQS
        MPSLQTALPP+LANNVIRLYRECLRRAKF+GHRQHN EL+VDMVRQQFKKNMHETDPEKIQKMKDDAARGLINHML+E ER+SG+KFS+S
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKFLGHRQHNTELIVDMVRQQFKKNMHETDPEKIQKMKDDAARGLINHMLYEHERMSGKKFSQS
TrEMBL top hitse value%identityAlignment
A0A0A0L5F6 Uncharacterized protein2.4e-4196.67Show/hide
Query:  PSLQTALPPELANNVIRLYRECLRRAKFLGHRQHNTELIVDMVRQQFKKNMHETDPEKIQKMKDDAARGLINHMLYEHERMSGKKFSQSS
        P  +TALPPELANNVIRLYRECLRRAKFLGHRQHNTELIVDMVRQQFKKNMHETDPEKIQKMKDDAARGLINHMLYEHERMSGKKFSQSS
Subjt:  PSLQTALPPELANNVIRLYRECLRRAKFLGHRQHNTELIVDMVRQQFKKNMHETDPEKIQKMKDDAARGLINHMLYEHERMSGKKFSQSS
A0A1S3AYB1 uncharacterized protein LOC1034839198.4e-4295.6Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKFLGHRQHNTELIVDMVRQQFKKNMHETDPEKIQKMKDDAARGLINHMLYEHERMSGKKFSQSS
        MPSLQTALPPELANNVIRLYRECLRRAKF+GHRQHNTELIVDMVRQQFKKNMHETDPEKIQKMKD+AARGLINHMLYEHERMSG+K SQSS
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKFLGHRQHNTELIVDMVRQQFKKNMHETDPEKIQKMKDDAARGLINHMLYEHERMSGKKFSQSS
A0A1U8AWB6 uncharacterized protein LOC104607091 isoform X22.3e-3989.01Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKFLGHRQHNTELIVDMVRQQFKKNMHETDPEKIQKMKDDAARGLINHMLYEHERMSGKKFSQSS
        MPSLQTALPPELANNVIRLYRECLRRA+F+GHRQHNTEL+VDMVRQQFKK+MHETDPEKIQK+KDDAARGLINH+LYE E+MSG+KFS SS
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKFLGHRQHNTELIVDMVRQQFKKNMHETDPEKIQKMKDDAARGLINHMLYEHERMSGKKFSQSS
A0A5A7UD86 Complex1_LYR domain-containing protein8.4e-4295.6Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKFLGHRQHNTELIVDMVRQQFKKNMHETDPEKIQKMKDDAARGLINHMLYEHERMSGKKFSQSS
        MPSLQTALPPELANNVIRLYRECLRRAKF+GHRQHNTELIVDMVRQQFKKNMHETDPEKIQKMKD+AARGLINHMLYEHERMSG+K SQSS
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKFLGHRQHNTELIVDMVRQQFKKNMHETDPEKIQKMKDDAARGLINHMLYEHERMSGKKFSQSS
A0A7N2R6B7 Uncharacterized protein3.0e-3989.01Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKFLGHRQHNTELIVDMVRQQFKKNMHETDPEKIQKMKDDAARGLINHMLYEHERMSGKKFSQSS
        MPSLQTALPPELANNVIRLYRECLRRAK++GHRQHNTELIVDMVRQQFKK+MHETDPEKIQK+KDDAARGLINH+LYE E+MSG+KFS+S+
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKFLGHRQHNTELIVDMVRQQFKKNMHETDPEKIQKMKDDAARGLINHMLYEHERMSGKKFSQSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G17300.1 unknown protein3.6e-3779.12Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKFLGHRQHNTELIVDMVRQQFKKNMHETDPEKIQKMKDDAARGLINHMLYEHERMSGKKFSQSS
        MPSLQT+LPPELANNV+RLYRECLRRAKF+G +QHNTEL+V MVRQQFKK+M+ETDPEKIQK+KDDAARGLINHML+E  +++G K SQ S
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKFLGHRQHNTELIVDMVRQQFKKNMHETDPEKIQKMKDDAARGLINHMLYEHERMSGKKFSQSS
AT3G17300.2 unknown protein2.0e-1975.86Show/hide
Query:  QHNTELIVDMVRQQFKKNMHETDPEKIQKMKDDAARGLINHMLYEHERMSGKKFSQSS
        QHNTEL+V MVRQQFKK+M+ETDPEKIQK+KDDAARGLINHML+E  +++G K SQ S
Subjt:  QHNTELIVDMVRQQFKKNMHETDPEKIQKMKDDAARGLINHMLYEHERMSGKKFSQSS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATCTCTACAGACTGCTCTACCTCCTGAGCTTGCTAATAATGTCATTAGGCTCTACCGCGAGTGCCTTCGAAGGGCCAAGTTTCTTGGTCATCGGCAACATAACAC
CGAGCTTATTGTCGATATGGTGAGGCAACAATTCAAAAAGAACATGCATGAGACTGACCCAGAGAAGATTCAGAAGATGAAAGATGATGCTGCTAGGGGACTTATAAACC
ATATGCTATACGAACATGAGAGAATGTCAGGTAAAAAATTCAGCCAAAGTTCTTGA
mRNA sequenceShow/hide mRNA sequence
AACCTCAGTCTTCTCTATCGACCAACTCTTCAAATTCGGGAGCTTCGTTGATTCTTGTTCGATTTTCTTCATCCTCTCCCTCTTTTTCCATACTCAAGCTCGTAAGAGGC
CACCAAGAGGAGCCGCGGGAGAAGTAGGTGTGTTAGTGAAAAGGGTGGAAATGCCATCTCTACAGACTGCTCTACCTCCTGAGCTTGCTAATAATGTCATTAGGCTCTAC
CGCGAGTGCCTTCGAAGGGCCAAGTTTCTTGGTCATCGGCAACATAACACCGAGCTTATTGTCGATATGGTGAGGCAACAATTCAAAAAGAACATGCATGAGACTGACCC
AGAGAAGATTCAGAAGATGAAAGATGATGCTGCTAGGGGACTTATAAACCATATGCTATACGAACATGAGAGAATGTCAGGTAAAAAATTCAGCCAAAGTTCTTGATGTT
ATATCGAAAATGACGTTGAGTTAAAGTTCACCATTGTAGCTTCAGACATTGTAGCAATAAGATGACTAATGATGAAAGTACTCCTCGGAGGTTGTTTTTGCATTTCCTTG
TTTATTTCTACGATTTGTTCAAAGAGATTGTCCATTCTACAGTAGTTGATTTCTACGATTTTTTCGTAGAAATCGTTCATTCTACGGTAGTTGGTGAATGTTTTTTGATC
TACAATCTACATTTTGTTTGCCTAAAGTGGATGTTTAAGGAAGATATGACATATTGCTCAACTCTGATGTCGGGTTCTCTTTTTT
Protein sequenceShow/hide protein sequence
MPSLQTALPPELANNVIRLYRECLRRAKFLGHRQHNTELIVDMVRQQFKKNMHETDPEKIQKMKDDAARGLINHMLYEHERMSGKKFSQSS