; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G15310 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G15310
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionsignal recognition particle 19 kDa protein
Genome locationChr3:11435657..11438502
RNA-Seq ExpressionCSPI03G15310
SyntenyCSPI03G15310
Gene Ontology termsGO:0006614 - SRP-dependent cotranslational protein targeting to membrane (biological process)
GO:0005786 - signal recognition particle, endoplasmic reticulum targeting (cellular component)
GO:0004386 - helicase activity (molecular function)
GO:0008312 - 7S RNA binding (molecular function)
InterPro domainsIPR002778 - Signal recognition particle, SRP19 subunit
IPR036521 - Signal recognition particle, subunit SRP19-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582147.1 Signal recognition particle 19 kDa protein, partial [Cucurbita argyrosperma subsp. sororia]8.2e-6894.96Show/hide
Query:  EFGRNMDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQ
        E G NMDGEIPNIKRWVVLYP+YINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDG LSNPAI SRKQ
Subjt:  EFGRNMDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQ

Query:  LMLRIAELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
        LMLRIAELVPRHPGR KKQEPASSSTAGPSKGKGGRKKK
Subjt:  LMLRIAELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK

KGN54616.2 hypothetical protein Csa_018066 [Cucumis sativus]6.2e-6895.71Show/hide
Query:  EFGRNMDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQ
        EFG NMDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTC EIGDCC HLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDG LSNPAITSRKQ
Subjt:  EFGRNMDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQ

Query:  LMLRIAELVPRHPGRTKKQEPA-SSSTAGPSKGKGGRKKK
        LMLRIAELVPRHPGRTKKQEPA SSSTAGPSKGKGGRKKK
Subjt:  LMLRIAELVPRHPGRTKKQEPA-SSSTAGPSKGKGGRKKK

XP_004147628.1 signal recognition particle 19 kDa protein [Cucumis sativus]5.6e-69100Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK

XP_008438988.1 PREDICTED: signal recognition particle 19 kDa protein [Cucumis melo]2.1e-6898.51Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDG LSNPAITSRKQLMLR+
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK

XP_038879562.1 signal recognition particle 19 kDa protein [Benincasa hispida]1.1e-6798.51Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDG LSNPAITSRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK

TrEMBL top hitse value%identityAlignment
A0A0A0L5F9 Uncharacterized protein1.1e-113100Show/hide
Query:  MWSIKDFLISRQSPCPIDQLSKIASCGLERECDHWAQPRQGLKPTRAVAFLQFWPTNFDGIFEFGRNMDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGV
        MWSIKDFLISRQSPCPIDQLSKIASCGLERECDHWAQPRQGLKPTRAVAFLQFWPTNFDGIFEFGRNMDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGV
Subjt:  MWSIKDFLISRQSPCPIDQLSKIASCGLERECDHWAQPRQGLKPTRAVAFLQFWPTNFDGIFEFGRNMDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGV

Query:  SKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRIAELVPRHPGRTKKQEPASSSTAGPSKGKGGRKK
        SKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRIAELVPRHPGRTKKQEPASSSTAGPSKGKGGRKK
Subjt:  SKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRIAELVPRHPGRTKKQEPASSSTAGPSKGKGGRKK

Query:  K
        K
Subjt:  K

A0A1S3AYC2 signal recognition particle 19 kDa protein1.0e-6898.51Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDG LSNPAITSRKQLMLR+
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK

A0A6J1CAM2 signal recognition particle 19 kDa protein2.8e-6696.3Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI
        MDGE+PNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDG LSNPAITSRKQ+MLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSTAGPSK-GKGGRKKK
        AELVPRHPGRTKKQEPASSSTAGPSK GKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSK-GKGGRKKK

A0A6J1GUF8 signal recognition particle 19 kDa protein1.7e-6696.27Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYP+YINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDG LSNPAI SRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGR KKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK

A0A6J1IY39 signal recognition particle 19 kDa protein1.3e-6697.01Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDG LSNPAI SRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGR KKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK

SwissProt top hitse value%identityAlignment
P09132 Signal recognition particle 19 kDa protein7.5e-2450.38Show/hide
Query:  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRIAELVP
        R++ +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D CS + L   +E +K Y     RD   RGRVRVQLK+EDG+L      SRK +ML  AE++P
Subjt:  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRIAELVP

Query:  RHPGRTKKQEPASSST---AGPSKGKGGRKK
        +   RT+K   A  S     G  KGKG +KK
Subjt:  RHPGRTKKQEPASSST---AGPSKGKGGRKK

P49964 Signal recognition particle 19 kDa protein4.2e-5174.22Show/hide
Query:  NIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRIAELVPR
        +IK+W V+YP+Y+NSKKT+AEGRRI   KAC +PTC EI DCCSHLK+P AIE+DKAYPRDF Q GRVRVQLKK+DG+  NPAI ++KQLM++IAELVP+
Subjt:  NIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRIAELVPR

Query:  HPGRTKKQEPASSSTAGPSKGKGGRKKK
        H GRTKKQEPA+SSTAG SKGKGG+KKK
Subjt:  HPGRTKKQEPASSSTAGPSKGKGGRKKK

Q5RBR1 Signal recognition particle 19 kDa protein7.5e-2450.38Show/hide
Query:  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRIAELVP
        R++ +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D CS + L   +E +K Y     RD   RGRVRVQLK+EDG+L      SRK +ML  AE++P
Subjt:  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRIAELVP

Query:  RHPGRTKKQEPASSST---AGPSKGKGGRKK
        +   RT+K   A  S     G  KGKG +KK
Subjt:  RHPGRTKKQEPASSST---AGPSKGKGGRKK

Q943Z6 Signal recognition particle 19 kDa protein8.0e-5069.66Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI
        MD    NIK+WVV+YP+YINSKKT+AEGRRI VSK+CENP C EI DCC HLKLP A+EIDKAYPRDFMQ GRVRVQLK+EDG L NPAITSRK LM +I
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQE---------PASSSTAGPS--KGKGGRKKK
        AELVPRHP R KKQE          A++ST+G S   GKGG+KK+
Subjt:  AELVPRHPGRTKKQE---------PASSSTAGPS--KGKGGRKKK

Q9D7A6 Signal recognition particle 19 kDa protein3.4e-2449.62Show/hide
Query:  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRIAELVP
        R++ +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D CS + L   +E +K Y     RD   RGRVRVQLK+EDG+L      SRK +ML +AE++P
Subjt:  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRIAELVP

Query:  RHPGRTKKQ---EPASSSTAGPSKGKGGRKK
        +   RT+K    +P      G  KGKG +KK
Subjt:  RHPGRTKKQ---EPASSSTAGPSKGKGGRKK

Arabidopsis top hitse value%identityAlignment
AT1G48160.1 signal recognition particle 19 kDa protein, putative / SRP19, putative5.7e-5169.66Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI
        MD    NIK+WVV+YP+YINSKKT+AEGRRI VSK+CENP C EI DCC HLKLP A+EIDKAYPRDFMQ GRVRVQLK+EDG L NPAITSRK LM +I
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQE---------PASSSTAGPS--KGKGGRKKK
        AELVPRHP R KKQE          A++ST+G S   GKGG+KK+
Subjt:  AELVPRHPGRTKKQE---------PASSSTAGPS--KGKGGRKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTCAATCAAGGACTTTCTTATCTCGAGACAAAGCCCGTGCCCGATCGACCAGTTGAGCAAGATTGCGAGTTGTGGACTCGAACGCGAGTGCGATCACTGGGCACA
GCCACGCCAAGGATTAAAGCCCACTCGAGCAGTGGCATTTTTACAATTTTGGCCTACAAATTTCGATGGCATATTCGAATTTGGTCGGAATATGGATGGAGAAATTCCCA
ACATAAAGAGATGGGTAGTGTTGTATCCCATTTATATTAATTCAAAGAAAACAATTGCTGAAGGAAGACGTATAGGTGTTAGCAAAGCTTGTGAGAATCCTACGTGTGCT
GAGATTGGAGATTGCTGCAGTCATCTCAAACTTCCCTTTGCCATTGAGATTGATAAAGCATATCCTCGTGATTTCATGCAAAGAGGGAGAGTGCGGGTTCAGCTGAAGAA
GGAGGATGGAGCTCTCTCCAATCCAGCTATTACTTCCAGAAAACAACTTATGCTTCGTATAGCCGAACTTGTTCCTAGACATCCTGGGAGGACTAAGAAGCAGGAGCCAG
CATCCTCATCAACAGCAGGACCTTCAAAAGGCAAGGGTGGAAGAAAGAAGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGTCAATCAAGGACTTTCTTATCTCGAGACAAAGCCCGTGCCCGATCGACCAGTTGAGCAAGATTGCGAGTTGTGGACTCGAACGCGAGTGCGATCACTGGGCACA
GCCACGCCAAGGATTAAAGCCCACTCGAGCAGTGGCATTTTTACAATTTTGGCCTACAAATTTCGATGGCATATTCGAATTTGGTCGGAATATGGATGGAGAAATTCCCA
ACATAAAGAGATGGGTAGTGTTGTATCCCATTTATATTAATTCAAAGAAAACAATTGCTGAAGGAAGACGTATAGGTGTTAGCAAAGCTTGTGAGAATCCTACGTGTGCT
GAGATTGGAGATTGCTGCAGTCATCTCAAACTTCCCTTTGCCATTGAGATTGATAAAGCATATCCTCGTGATTTCATGCAAAGAGGGAGAGTGCGGGTTCAGCTGAAGAA
GGAGGATGGAGCTCTCTCCAATCCAGCTATTACTTCCAGAAAACAACTTATGCTTCGTATAGCCGAACTTGTTCCTAGACATCCTGGGAGGACTAAGAAGCAGGAGCCAG
CATCCTCATCAACAGCAGGACCTTCAAAAGGCAAGGGTGGAAGAAAGAAGAAATAG
Protein sequenceShow/hide protein sequence
MWSIKDFLISRQSPCPIDQLSKIASCGLERECDHWAQPRQGLKPTRAVAFLQFWPTNFDGIFEFGRNMDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCA
EIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRIAELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK