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CSPI03G15880 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G15880
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr3:11895551..11896445
RNA-Seq ExpressionCSPI03G15880
SyntenyCSPI03G15880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600178.1 hypothetical protein SDJN03_05411, partial [Cucurbita argyrosperma subsp. sororia]1.1e-0857.65Show/hide
Query:  VFFSLLLLLAFNFS------TGVLARPAREKVAVETNWEMGRKLTARQLDTSWKGNYSPPPPNR-PPPPPPYRQLPRPRPCYRRP
        V F  LLLLAFN S      T ++AR   E + +ETN  +GR+L ARQLDTSW GNYSPPPP R PPPPPP R  PRP     RP
Subjt:  VFFSLLLLLAFNFS------TGVLARPAREKVAVETNWEMGRKLTARQLDTSWKGNYSPPPPNR-PPPPPPYRQLPRPRPCYRRP

KAG7014831.1 hypothetical protein SDJN02_22460, partial [Cucurbita argyrosperma subsp. argyrosperma]6.3e-0440.74Show/hide
Query:  MATPRFLVFFSLLLLLAFNF-----------STGVLARPAREKVAVETNWEMGRKLTARQLDTSWKGNYSPPPPNRPPPPP
        MA+P  LV +  +  L F                V+ R ARE   +     +G +L ARQLDT+W+G+YSPPPP  PPPPP
Subjt:  MATPRFLVFFSLLLLLAFNF-----------STGVLARPAREKVAVETNWEMGRKLTARQLDTSWKGNYSPPPPNRPPPPP

KAG7030841.1 hypothetical protein SDJN02_04878 [Cucurbita argyrosperma subsp. argyrosperma]5.0e-0957.14Show/hide
Query:  VFFSLLLLLAFNFS------TGVLARPAREKVAVETNWEMGRKLTARQLDTSWKGNYSPPPPNRPPPPPPYRQLPRPRPCYRRP
        V F  LLLLAFN S      T ++AR   E + +ETN  +GR+L ARQLDTSW GNYSPPPP R PPPPP R  PRP     RP
Subjt:  VFFSLLLLLAFNFS------TGVLARPAREKVAVETNWEMGRKLTARQLDTSWKGNYSPPPPNRPPPPPPYRQLPRPRPCYRRP

KGN57261.1 hypothetical protein Csa_010292 [Cucumis sativus]4.6e-3997.75Show/hide
Query:  MATPRFLVFFSLLLLLAFNFSTGVLARPAREKVAVETNWEMGRKLTARQLDTSWKGNYSPPPPNRPPPPPPYRQLPRPRPCYRRPCIPP
        MATPRFLVFFS LLLLAFNFSTGVLARPARE VAVETNWEMGRKLTARQLDTSWKGNYSPPPPNRPPPPPPYRQLPRPRPCYRRPCIPP
Subjt:  MATPRFLVFFSLLLLLAFNFSTGVLARPAREKVAVETNWEMGRKLTARQLDTSWKGNYSPPPPNRPPPPPPYRQLPRPRPCYRRPCIPP

XP_038907057.1 uncharacterized protein LOC120092883 [Benincasa hispida]2.0e-1365.93Show/hide
Query:  MATPRFLVFFSLLLLLAFNFSTGVLARPAREKVAVETNWEMGRKLTARQLDTSWKGNYSPPPPNRP--PPPPPYRQLPRPRPCYR-RPCIP
        MATPRFLVFFS LLLLAFNF T VLA  ARE V  +    MGR+L ARQLD SW+GNYSPPPP  P  PPPPP    PR R   R RPC P
Subjt:  MATPRFLVFFSLLLLLAFNFSTGVLARPAREKVAVETNWEMGRKLTARQLDTSWKGNYSPPPPNRP--PPPPPYRQLPRPRPCYR-RPCIP

TrEMBL top hitse value%identityAlignment
A0A0A0LB11 Uncharacterized protein2.2e-3997.75Show/hide
Query:  MATPRFLVFFSLLLLLAFNFSTGVLARPAREKVAVETNWEMGRKLTARQLDTSWKGNYSPPPPNRPPPPPPYRQLPRPRPCYRRPCIPP
        MATPRFLVFFS LLLLAFNFSTGVLARPARE VAVETNWEMGRKLTARQLDTSWKGNYSPPPPNRPPPPPPYRQLPRPRPCYRRPCIPP
Subjt:  MATPRFLVFFSLLLLLAFNFSTGVLARPAREKVAVETNWEMGRKLTARQLDTSWKGNYSPPPPNRPPPPPPYRQLPRPRPCYRRPCIPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACACCAAGATTTTTGGTCTTCTTCTCTTTGCTCCTTCTTCTTGCTTTCAACTTTTCGACCGGGGTTTTAGCTCGACCAGCCCGTGAAAAGGTGGCGGTGGAGAC
TAATTGGGAAATGGGTCGGAAACTAACAGCTCGACAGTTGGATACCTCTTGGAAAGGAAATTATTCTCCTCCTCCTCCTAATCGTCCTCCTCCGCCCCCTCCTTATCGTC
AGCTTCCTCGCCCTCGTCCTTGTTATCGTCGTCCTTGTATCCCTCCCTAA
mRNA sequenceShow/hide mRNA sequence
CCACAACCAAAAATTAATGGCTACACCAAGATTTTTGGTCTTCTTCTCTTTGCTCCTTCTTCTTGCTTTCAACTTTTCGACCGGGGTTTTAGCTCGACCAGCCCGTGAAA
AGGTGGCGGTGGAGACTAATTGGGAAATGGGTCGGAAACTAACAGCTCGACAGTTGGATACCTCTTGGAAAGGAAATTATTCTCCTCCTCCTCCTAATCGTCCTCCTCCG
CCCCCTCCTTATCGTCAGCTTCCTCGCCCTCGTCCTTGTTATCGTCGTCCTTGTATCCCTCCCTAATCATCAGCAAGGCAAAATCGCCAACGTGAATGGCAAATTGTTGT
ATGAACTTCGAATTTTCTTTGAGGTTTGTGACGTTTAATGGTGTTGTGTGACTTTGGGTGGAGCCTGGGGCACAGGTGCATCTGGAGTTTAATAATGTCAAATAATTCAA
TTGTGTGTGTGATCAAAGTTTTCAAGAGTATTGATGTAATAAAGAATGTTCTTTATGTAAATGGGACTGAAGACTATGTGTTATGACTTCTTTGATTCAAGTTTAATACA
GATGAGTAATAATAATGAGTGTGTGTGGGAAATATGTTCATATCAAACAAAGAATCACACACCAAGTCGTCAACATGGAGTATATACTTAGCTGGTGAAGATCGAAAATC
TCAGACCTAAATATCATTGAG
Protein sequenceShow/hide protein sequence
MATPRFLVFFSLLLLLAFNFSTGVLARPAREKVAVETNWEMGRKLTARQLDTSWKGNYSPPPPNRPPPPPPYRQLPRPRPCYRRPCIPP