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CSPI03G16240 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G16240
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr3:12155428..12155661
RNA-Seq ExpressionCSPI03G16240
SyntenyCSPI03G16240
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN57326.2 hypothetical protein Csa_009907 [Cucumis sativus]6.2e-32100Show/hide
Query:  MQNEPSRKLLEEMQRRTQAMTQRSGRKDILWVFFTLLRSIMEGMPQLSKFLALNISNNIATSTELTSSNISWARELE
        MQNEPSRKLLEEMQRRTQAMTQRSGRKDILWVFFTLLRSIMEGMPQLSKFLALNISNNIATSTELTSSNISWARELE
Subjt:  MQNEPSRKLLEEMQRRTQAMTQRSGRKDILWVFFTLLRSIMEGMPQLSKFLALNISNNIATSTELTSSNISWARELE
TrEMBL top hitse value%identityAlignment
A0A0A0L8G2 Uncharacterized protein3.0e-32100Show/hide
Query:  MQNEPSRKLLEEMQRRTQAMTQRSGRKDILWVFFTLLRSIMEGMPQLSKFLALNISNNIATSTELTSSNISWARELE
        MQNEPSRKLLEEMQRRTQAMTQRSGRKDILWVFFTLLRSIMEGMPQLSKFLALNISNNIATSTELTSSNISWARELE
Subjt:  MQNEPSRKLLEEMQRRTQAMTQRSGRKDILWVFFTLLRSIMEGMPQLSKFLALNISNNIATSTELTSSNISWARELE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAACGAGCCTAGCAGGAAACTGTTAGAAGAAATGCAGAGGAGAACACAAGCCATGACTCAAAGATCAGGAAGAAAAGACATTTTATGGGTGTTTTTCACCTTACT
CCGTTCAATCATGGAGGGTATGCCTCAACTTTCCAAGTTCTTGGCACTCAACATTTCAAACAACATTGCAACTTCCACCGAACTAACATCATCAAACATTTCCTGGGCAA
GAGAATTGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAAACGAGCCTAGCAGGAAACTGTTAGAAGAAATGCAGAGGAGAACACAAGCCATGACTCAAAGATCAGGAAGAAAAGACATTTTATGGGTGTTTTTCACCTTACT
CCGTTCAATCATGGAGGGTATGCCTCAACTTTCCAAGTTCTTGGCACTCAACATTTCAAACAACATTGCAACTTCCACCGAACTAACATCATCAAACATTTCCTGGGCAA
GAGAATTGGAATAA
Protein sequenceShow/hide protein sequence
MQNEPSRKLLEEMQRRTQAMTQRSGRKDILWVFFTLLRSIMEGMPQLSKFLALNISNNIATSTELTSSNISWARELE